Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_N10
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 287 1e-78
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 66 6e-12
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 65 1e-11
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 62 1e-10
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 58 2e-09
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 53 5e-08
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 51 3e-07
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 49 1e-06
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 44 3e-05
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 31 0.23
SPAC19B12.06c |||rhomboid family protease|Schizosaccharomyces po... 27 2.8
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 27 2.8
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 27 3.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 4.8
SPBC1773.14 |arg7||argininosuccinate lyase |Schizosaccharomyces ... 26 6.4
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 8.5
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 26 8.5
SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces po... 26 8.5
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 287 bits (704), Expect = 1e-78
Identities = 135/206 (65%), Positives = 171/206 (83%)
Frame = +1
Query: 199 RFYAKDVRFGADVRALMLQGVDILADAVAVTMGPXGRNVILEQSWGSPKITKDGVTVAKG 378
R YAKD++FG D RA +L GVD LA AV+VT+GP GRNV+++Q +GSPKITKDGVTVA+
Sbjct: 31 RTYAKDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARS 90
Query: 379 VELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRG 558
V LKDKF+N+GA+LVQ+VA+ TNE AGDGTTTATVL RAI E ++ G NP+++RRG
Sbjct: 91 VSLKDKFENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRG 150
Query: 559 VMLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKD 738
+ LAVD V E L+ + +TT EEI+QVATISANGDT IG+L+A AM++VG++GVITVK+
Sbjct: 151 IQLAVDNVVEFLQANKRDITTSEEISQVATISANGDTHIGELLAKAMERVGKEGVITVKE 210
Query: 739 GKTLTDELEIIEGMKFDRXYISPYFI 816
G+T++DELE+ EGMKFDR YISPYFI
Sbjct: 211 GRTISDELEVTEGMKFDRGYISPYFI 236
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 66.1 bits (154), Expect = 6e-12
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Frame = +1
Query: 226 GADVRALMLQGVDILADAVAVTMGPXGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 405
G D + +A+ V ++GP G + IL G +T DG T+ +E++ +
Sbjct: 32 GIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQI-- 89
Query: 406 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 585
AKL+ ++ + ++E GDGTT VLA A+ ++ I KG +PI I G A
Sbjct: 90 --AKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAV 147
Query: 586 EKLKGMSKPVT-TPEEIAQV--ATISANGDTAIGKLIADAMKKVGRDGVITVKDGKTLTD 756
+ L +S V +PE + + ++ G + K D + D V++V D +
Sbjct: 148 KHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSK-AHDHFANIAVDAVLSVADLQRKDV 206
Query: 757 ELEIIE 774
+ E+I+
Sbjct: 207 DFELIK 212
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 65.3 bits (152), Expect = 1e-11
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 8/205 (3%)
Frame = +1
Query: 226 GADVRALMLQGVDILADAVAVTMGPXGRNVILEQ-SWGSPKITKDGVTVAKGVELKDKFQ 402
G + R G + D V T+GP G + IL+ S G +T DG T+ K + L
Sbjct: 18 GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIAL----D 73
Query: 403 NIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVML----A 570
N AK++ N++ ++E GDGTT+ V A + ++ ++ +P I G + A
Sbjct: 74 NAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTA 133
Query: 571 VDAVK-EKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKDGKT 747
+DA++ + S P ++ +A + + + I + ++ D V+ +K G T
Sbjct: 134 IDALRASSIDNSSDPAKFRSDLENIARTTLS--SKILSQNKNHFAQLAVDAVLRLK-GST 190
Query: 748 LTDELEIIE--GMKFDRXYISPYFI 816
D ++II+ G K D ++ FI
Sbjct: 191 NLDNIQIIKILGGKLDDSFLDEGFI 215
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 62.1 bits (144), Expect = 1e-10
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 4/179 (2%)
Frame = +1
Query: 232 DVRALMLQGVDILADAVAVTMGPXGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIG 411
+VR + +ADA+ ++GP G + +++ G +T DG T+ K + +
Sbjct: 19 EVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHP----A 74
Query: 412 AKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEI----RRGVMLAVDA 579
AK++ +++ + EAGDGTT+ +LA ++ + + KG +P I +R VD
Sbjct: 75 AKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDC 134
Query: 580 VKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKDGKTLTD 756
+KE ++ ++ E + + AT S N + I ++ + + D V+ V D + T+
Sbjct: 135 MKE--NALAIELSDRESLLRAATTSLN--SKIVSQYSNLLAPIAVDAVLKVIDPRVATN 189
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 58.0 bits (134), Expect = 2e-09
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Frame = +1
Query: 226 GADVRALMLQGVDILADAVAVTMGPXGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 405
G DVR + +A+ V ++GP G + +L G +T DG T+ + L D
Sbjct: 19 GEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATI---LSLLDVEHP 75
Query: 406 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAV-DAV 582
G LV+ +A ++E GDGTT+ ++A + + E + +P I G LA+ +AV
Sbjct: 76 AGKVLVE-LAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 583 KEKLKGMSKPVTT--PEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVK 735
K +S V + E + VA S + IG +D + D +++VK
Sbjct: 135 KFMTDVLSCSVDSLGKESLINVAKTSMS-SKIIGN-DSDFFSTMAVDAMLSVK 185
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 53.2 bits (122), Expect = 5e-08
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Frame = +1
Query: 268 LADAVAVTMGPXGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 447
L D + +GP G +L G+ K+TKDG + +++ QN A + A +
Sbjct: 28 LQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQI----QNPTASCIAKAATAQD 83
Query: 448 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPE 627
+ GDGTT+ +L + K+ I +G +P I G LA + L
Sbjct: 84 DATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEVDR 143
Query: 628 EI-AQVATISANGDTAIGKLIADAMKKVGRDGVITVKDGKTLTDELEIIEGMK 783
E+ VA S + T I + +++ D ++T++ D L ++E MK
Sbjct: 144 EVLLNVAKTSLS--TKISSKVVESLAPAVVDAILTIRRPDEPID-LHMVEIMK 193
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 50.8 bits (116), Expect = 3e-07
Identities = 30/108 (27%), Positives = 50/108 (46%)
Frame = +1
Query: 274 DAVAVTMGPXGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEE 453
D + T+GP G + ++ G I+ DG T+ K +++ AK + ++A + E
Sbjct: 38 DTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHP----AAKTLVDIARAQDAE 93
Query: 454 AGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLK 597
GDGTT+ V A + +E + G + I RG A K+K
Sbjct: 94 VGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIK 141
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 48.8 bits (111), Expect = 1e-06
Identities = 39/173 (22%), Positives = 70/173 (40%)
Frame = +1
Query: 250 LQGVDILADAVAVTMGPXGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 429
+Q +AD + +GP +L GS +T DG + + +E+ AK +
Sbjct: 25 IQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP----AAKSMIE 80
Query: 430 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK 609
+A +EE GDGTT+ +LA I + + +P+ + R A++ + ++
Sbjct: 81 LARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITL 140
Query: 610 PVTTPEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKDGKTLTDELEI 768
PV + I T + +D M + V TV E++I
Sbjct: 141 PVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRTVASTSNGRMEIDI 193
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 44.0 bits (99), Expect = 3e-05
Identities = 27/110 (24%), Positives = 46/110 (41%)
Frame = +1
Query: 268 LADAVAVTMGPXGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 447
L++ ++GP G+N I+ +T D T+ + +E+ AKLV +
Sbjct: 38 LSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHP----AAKLVVDATQQQE 93
Query: 448 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLK 597
E GD V + + I G P+EI +G +A+ E L+
Sbjct: 94 NELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLE 143
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 31.1 bits (67), Expect = 0.23
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +1
Query: 307 RNVILEQSWGSPKITKDGVTVAK-GVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATV 483
R VI ++ S +T G T G+ELKD+F+ +G K++ T + T +
Sbjct: 542 RKVIKQERPDSIYVTFGGQTALNVGIELKDEFEQLGVKVL-----GTPIDTIITTEDREL 596
Query: 484 LARAIAKEGFEKISKGANPIEIRRGVMLAVD 576
ARA+ E EK +K A+ I + ++ D
Sbjct: 597 FARAM-DEINEKCAKSASASSIEEAIKVSKD 626
>SPAC19B12.06c |||rhomboid family protease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 807 W*NVTSIKFHTLNDFKLVSEGFSIF 733
W N+ +I+ HTLN + LV G F
Sbjct: 55 WHNLINIRLHTLNTYPLVHHGVISF 79
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -3
Query: 731 TVITPSLPTFFIASAMSLPIAVSPLADMVATCAISSGVVTGFDIPLSFSLTAS 573
T +T S P+ ++S S+P S ++ V+T + +S +GF LS + T S
Sbjct: 134 TTLTSSSPSA-VSSTTSIPSISSTISSSVSTSSFTSLSSSGFSTVLSSTNTTS 185
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 748 LTDELEIIEGMKFDRXYISPYFIN 819
+ + L+ I+GM FD +ISP F N
Sbjct: 71 IRNHLDYIQGMGFDAIWISPIFEN 94
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = -3
Query: 722 TPSLPTFFIASAMSLPIAVSPLADMVATCAISSGVVT--GFDIPLSFSLTASTASI 561
TPS + I+S+ + + S L+ ++T ISS + T IP S +L +S++S+
Sbjct: 629 TPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSSSL 684
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 4.8
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 2/170 (1%)
Frame = -3
Query: 716 SLPTFFIASAMSLPIAVSPLADMVATCAISSGVVTGFDIPLSF--SLTASTASITPLLIS 543
S P + S + + +PL+ + + A S+ + PLS S TA++AS TPL
Sbjct: 305 STPLTSVNSTTTTSASSTPLSSV--SSANSTTATSTSSTPLSSVNSTTATSASSTPLTSV 362
Query: 542 IGLAPFDIFSKPSFAIARXXXXXXXXXXXXXXXXXXXTFCTNLAPMFWNLSLSSTPLATV 363
S P ++ T ++ AP + N S S P ++V
Sbjct: 363 NSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSY-NTS-SVLPTSSV 420
Query: 362 TPSFVIFGDPQDCSKITFLPXGPIVTATASARMSTPCSMRALTSAPNLTS 213
+ + + + + + P + + TA++ STP S T+A + +S
Sbjct: 421 SSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASS 470
>SPBC1773.14 |arg7||argininosuccinate lyase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 461
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 662 PLADMVATCAISSGVVTGFDIPLSFSLTASTASITPLLISIGLAPF 525
PL D T + S ++TG L+ + T S+TP L++ LA +
Sbjct: 332 PLFDAFKTVSDSLQILTGVVSTLTINPTKIAESLTPDLLATDLAEY 377
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = -3
Query: 389 LSSTPLATVTPSFVIFGDPQDCSKITFLPXGPIVTATASARMSTPCSMRALTSAP 225
LSS P + V G SK+ P + + +SA + C+ +L S P
Sbjct: 12 LSSAPTKPIASGSVATGIDSMPSKVDITPCDLLENSKSSAPLFVECNQESLHSIP 66
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3
Query: 371 ATVTPSFVIFGDPQDCSKITFLPXGPIVTATASARMSTPCSMRALTSAPNLTSL 210
A+V P P ++ L P+ A SAR S+ S ++ + P+L +L
Sbjct: 539 ASVRPITAAVFAPTKTKQLLTLSGDPVYLAAISARRSSVISNASIETGPSLRNL 592
>SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 187 YQLSRFYAKDVRFGADVRALMLQGVDILADAV 282
Y+L+ F+ R+ V LQGV + AD V
Sbjct: 152 YRLTNFFQNHRRYAKSVDEKQLQGVALTADEV 183
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,291,854
Number of Sequences: 5004
Number of extensions: 63687
Number of successful extensions: 196
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -