Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_N10
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.9  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              23   3.8  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   6.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   8.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   8.8  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 642 YLCDFFGCCNGFRHS 598
           ++  FFGCC   R S
Sbjct: 63  FVISFFGCCGAIRES 77


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = -2

Query: 708 YLLHCISNELADCXVPVSRYGSYLCDFFGCCNGFRHSFKFLFNG 577
           Y  H + +       PV R  +Y C   G C    H+ K+   G
Sbjct: 53  YRKHLLKDADGRVSCPVLR--AYTCPICGACGDIAHTVKYCPKG 94


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 380 TPLATVTPSFVIFGDPQ 330
           +P A + P  V++G+PQ
Sbjct: 98  SPSAALQPQHVVYGNPQ 114


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 729 CDYSIPTYLLHCISNELADCXVPVSRY 649
           CD  +   +L C ++ L+ C + + RY
Sbjct: 111 CDSWVSLDILLCTASILSLCAISIDRY 137


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -2

Query: 642 YLCDFFGCCNGFRHSFKFLFNGIYGE 565
           Y CD  G   G+ H  K      YGE
Sbjct: 232 YTCDICGKSFGYNHVLKLHQVAHYGE 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,127
Number of Sequences: 438
Number of extensions: 4429
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)