Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_N09
         (892 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.         32   2.4  
AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.         32   2.4  
AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.         32   2.4  
AF174600-1|AAF04521.1|  255|Homo sapiens F-box protein Fbx20 pro...    32   2.4  
AK090647-1|BAC03496.1|  353|Homo sapiens   protein.                    31   5.6  
AB020665-1|BAA74881.2| 1557|Homo sapiens KIAA0858 protein protein.     31   7.4  

>AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
 Frame = +1

Query: 598 DRTIKIPXVXPWKLPRALSCSXPCRLPDTCPPFSLREAWRFLI-AHAVXISVRCXSFAPS 774
           DR   +P   PW LP  +     C L  TCP      + R L+ ++             S
Sbjct: 211 DRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQS 270

Query: 775 WAVCTN-PPFSPTAAP 819
           W + T  PP S T  P
Sbjct: 271 WKLGTTVPPISFTPGP 286


>AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
 Frame = +1

Query: 598 DRTIKIPXVXPWKLPRALSCSXPCRLPDTCPPFSLREAWRFLI-AHAVXISVRCXSFAPS 774
           DR   +P   PW LP  +     C L  TCP      + R L+ ++             S
Sbjct: 211 DRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQS 270

Query: 775 WAVCTN-PPFSPTAAP 819
           W + T  PP S T  P
Sbjct: 271 WKLGTTVPPISFTPGP 286


>AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
 Frame = +1

Query: 598 DRTIKIPXVXPWKLPRALSCSXPCRLPDTCPPFSLREAWRFLI-AHAVXISVRCXSFAPS 774
           DR   +P   PW LP  +     C L  TCP      + R L+ ++             S
Sbjct: 211 DRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQS 270

Query: 775 WAVCTN-PPFSPTAAP 819
           W + T  PP S T  P
Sbjct: 271 WKLGTTVPPISFTPGP 286


>AF174600-1|AAF04521.1|  255|Homo sapiens F-box protein Fbx20
           protein.
          Length = 255

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
 Frame = +1

Query: 598 DRTIKIPXVXPWKLPRALSCSXPCRLPDTCPPFSLREAWRFLI-AHAVXISVRCXSFAPS 774
           DR   +P   PW LP  +     C L  TCP      + R L+ ++             S
Sbjct: 85  DRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQS 144

Query: 775 WAVCTN-PPFSPTAAP 819
           W + T  PP S T  P
Sbjct: 145 WKLGTTVPPISFTPGP 160


>AK090647-1|BAC03496.1|  353|Homo sapiens   protein.
          Length = 353

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 613 IPXVXPWKLPRALSCSXPCRLPDTCP 690
           IP   P  +P A+ C+ PC +P T P
Sbjct: 162 IPCTVPCTVPHAVPCNAPCTVPRTAP 187


>AB020665-1|BAA74881.2| 1557|Homo sapiens KIAA0858 protein protein.
          Length = 1557

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
 Frame = +1

Query: 598 DRTIKIPXVXPWKLPRALSCSXPCRLPDTCPPFSLREAWRFLI-AHAVXISVRCXSFAPS 774
           DR   +P   PW LP  +     C    TCP      + R L+ ++             S
Sbjct: 475 DRYHPVPFPEPWTLPPEIQAKFLCVFERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQS 534

Query: 775 WAVCTN-PPFSPTAAP 819
           W + T  PP S T  P
Sbjct: 535 WKLGTTVPPISFTPGP 550


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,514,124
Number of Sequences: 237096
Number of extensions: 2451720
Number of successful extensions: 11371
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11366
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)