Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_M24
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0304 - 22206490-22207065                                         31   1.2  
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430...    30   2.2  
03_02_0373 - 7865708-7866310,7869547-7870443                           29   5.0  
04_02_0004 - 8430902-8431210,8431295-8431445,8431542-8431830,843...    29   6.6  

>11_06_0304 - 22206490-22207065
          Length = 191

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 22/77 (28%), Positives = 38/77 (49%)
 Frame = +3

Query: 438 CEFAVTKSQLGSEMMAAELKIYEALSKILESGIEVAKENIQKSKIDLAQAKTVRKNRIEY 617
           C +AVTK  + S  + A+ KI + LSK  + GIE+  E+++     +       K  +  
Sbjct: 46  CNYAVTK--VTSTPVLADRKISKNLSKHKDDGIEMTHEDVESVMTKMGPDFDHGKTMVYK 103

Query: 618 DVLAKVISEQPDRKEXS 668
           ++ +  +SE  D  E S
Sbjct: 104 EIGSNCMSELFDDDEPS 120


>01_05_0487 +
           22641133-22642182,22642276-22642863,22642961-22643068,
           22643582-22643692,22643784-22643849,22644858-22644917,
           22644990-22645119,22645159-22645547,22645783-22645902,
           22645957-22646022,22646190-22646255
          Length = 917

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +3

Query: 441 EFAVTKSQLGSEMMAAELKIYEALSKILESGIEVAKENIQKSKIDLAQA-KTVRKNRIEY 617
           + A T + +G+E+   E++   A  K  +   E  KE    SK+  A A K  R  R+  
Sbjct: 118 DVAATVNDVGAEVKDDEMEAESAAPKRRKRKKEKEKERKTTSKVAEADAKKPPRHVRVML 177

Query: 618 DVLAKVISEQPDRKEXSERLSTLKTELXNLXXPQQQ 725
           +VLAK   E  + ++  E L   K E   L   + +
Sbjct: 178 EVLAK-RKEAEELRKREEELRKRKAEEERLQREEDE 212


>03_02_0373 - 7865708-7866310,7869547-7870443
          Length = 499

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
 Frame = +3

Query: 270 DEDVIRRRLLIDGDGTGDDRRLNVLLKTLIKWCNTTDDKPEESKATHDRMLAQLAQC--E 443
           DE V RRR   D    G +  LNV+L    +W      + + S  +HD M          
Sbjct: 251 DEQVARRRPERDAGEAGKNDLLNVVLDMEREW------QQKGSVLSHDAMRVLFTDLYGA 304

Query: 444 FAVTKSQLGSEMMAAELKIYEALSKILESGIEVAKENIQKSKIDLAQ 584
            A T S L    +A  L+  E++ KI E    V   N Q  + D+A+
Sbjct: 305 GASTTSVLIEWAIADLLQNPESMRKIKEEITNVIGTNAQIQEFDIAR 351


>04_02_0004 -
           8430902-8431210,8431295-8431445,8431542-8431830,
           8431873-8432083,8432184-8432380,8432454-8432555,
           8432666-8433998
          Length = 863

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 537 EVAKENIQKSKIDLAQAKTVRKNRIEYDVLAK 632
           EV  EN++ S +DL    T   N  +Y++L K
Sbjct: 505 EVGSENVELSSVDLDSVLTATNNFSDYNLLGK 536


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,109,511
Number of Sequences: 37544
Number of extensions: 310245
Number of successful extensions: 820
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)