Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_M24
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82256-5|CAB54184.1| 210|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 30 2.6
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 30 2.6
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 30 2.6
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 30 2.6
U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical p... 29 3.4
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 29 3.4
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 29 3.4
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 6.0
>Z82256-5|CAB54184.1| 210|Caenorhabditis elegans Hypothetical
protein B0513.2 protein.
Length = 210
Score = 70.1 bits (164), Expect = 2e-12
Identities = 44/161 (27%), Positives = 79/161 (49%)
Frame = +3
Query: 273 EDVIRRRLLIDGDGTGDDRRLNVLLKTLIKWCNTTDDKPEESKATHDRMLAQLAQCEFAV 452
ED + R+L+ DG+G GDDR++ + T + D K +A ++ L E ++
Sbjct: 3 EDTLLRKLVADGEGVGDDRKVQQIA-TFFRESRKEDAKTSVPEAV--KVTKALEFLELSM 59
Query: 453 TKSQLGSEMMAAELKIYEALSKILESGIEVAKENIQKSKIDLAQAKTVRKNRIEYDVLAK 632
K + S M + ++ ++ IE + ++ +K +LA AK V++NR EY L
Sbjct: 60 LKQKRISHMNKIHATECDQFAEEIDQSIEEMYKKMEVAKNELADAKIVKRNRQEYRKLVN 119
Query: 633 VISEQPDRKEXSERLSTLKTELXNLXXPQQQLEVGXLTKNS 755
V+ E P R E + +L +K +L Q+ LE + + +
Sbjct: 120 VLEEVPSRAETTRKLGEVKDDLERQHERQKVLEAKLMDRRN 160
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 492 LKIYEALSKILESGIEVAKENIQKSKIDLAQAKTVRKNRIEYDVLAKVISEQPDRKE 662
L I A +K A +N+QK+K DLA + R +E +V+ E+ +R E
Sbjct: 977 LDIANARTKEEAEKFATASKNLQKTKADLAMMEAERLTLLEARNRVEVLQEEVERLE 1033
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 492 LKIYEALSKILESGIEVAKENIQKSKIDLAQAKTVRKNRIEYDVLAKVISEQPDRKE 662
L I A +K A +N+QK+K DLA + R +E +V+ E+ +R E
Sbjct: 977 LDIANARTKEEAEKFATASKNLQKTKADLAMMEAERLTLLEARNRVEVLQEEVERLE 1033
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 492 LKIYEALSKILESGIEVAKENIQKSKIDLAQAKTVRKNRIEYDVLAKVISEQPDRKE 662
L I A +K A +N+QK+K DLA + R +E +V+ E+ +R E
Sbjct: 977 LDIANARTKEEAEKFATASKNLQKTKADLAMMEAERLTLLEARNRVEVLQEEVERLE 1033
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 540 VAKENIQKSKIDLAQAKTVRKNRIEYDVLAKVISEQPDRKEXSERLSTLKTEL 698
+AK + KSKID+++AKT+ LA + + D + S+ L L + L
Sbjct: 692 IAKSKVFKSKIDVSKAKTLSSYSTPLQNLASIPDVKIDAVKKSKALEILISSL 744
>U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical
protein C05D10.4c protein.
Length = 418
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 453 TKSQLGSEMMAAELKIYEALSKILESGIEVAKENIQKS 566
T +QLG K+ + LSKI+E+G E A+E+I+ +
Sbjct: 261 TLAQLGVSNPEIRKKLLDDLSKIIENGPEPAQEDIRNN 298
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 453 TKSQLGSEMMAAELKIYEALSKILESGIEVAKENIQKS 566
T +QLG K+ + LSKI+E+G E A+E+I+ +
Sbjct: 440 TLAQLGVSNPEIRKKLLDDLSKIIENGPEPAQEDIRNN 477
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 453 TKSQLGSEMMAAELKIYEALSKILESGIEVAKENIQKS 566
T +QLG K+ + LSKI+E+G E A+E+I+ +
Sbjct: 408 TLAQLGVSNPEIRKKLLDDLSKIIENGPEPAQEDIRNN 445
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.7 bits (61), Expect = 6.0
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +3
Query: 375 TDDKPEESKATHDRMLAQLAQCEFAVTKSQLGSEMMAAELKIYEALSKILES-GIEVAKE 551
TD + E H+ QLA A+ K G + A+ L EAL + L+S I +
Sbjct: 804 TDREDEVDYLRHEAD-RQLANALHAIRKKPEGVYVQASTLGSLEALLEFLKSQNIPYSNV 862
Query: 552 NI-QKSKIDLAQAKTVRKNRIEY 617
NI K D+ +A +++++ EY
Sbjct: 863 NIGPVHKKDVQKASAMKEHKAEY 885
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,895,641
Number of Sequences: 27780
Number of extensions: 312276
Number of successful extensions: 848
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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