Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_M23
(938 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate... 151 7e-37
AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical... 151 7e-37
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 32 0.68
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 32 0.68
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 32 0.68
U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical pr... 29 3.6
AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion transpo... 29 4.8
AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion transpo... 29 4.8
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 29 4.8
AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate perme... 29 4.8
AF016414-6|AAG24022.1| 323|Caenorhabditis elegans Serpentine re... 29 6.3
>U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate
isomerase protein.
Length = 247
Score = 151 bits (366), Expect = 7e-37
Identities = 71/115 (61%), Positives = 85/115 (73%)
Frame = +1
Query: 115 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 294
M RKF VGGNWKMNGD ++ IV L + +V+V+V PA YL+Y K+ + V V
Sbjct: 1 MTRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLV 60
Query: 295 AAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHA 459
AAQNC+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK HA
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHA 115
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2
Query: 464 ESGLKVIACIGETLEXRESGKTEEVVFRQLKA 559
E+G+KV+ CIGE LE RE+G T++V FRQL+A
Sbjct: 117 EAGIKVVFCIGEKLEEREAGHTKDVNFRQLQA 148
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 588 NIVLAYEPVXAIGTGK 635
NIV+AYEPV AIGTGK
Sbjct: 158 NIVIAYEPVWAIGTGK 173
>AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical
protein Y17G7B.7 protein.
Length = 247
Score = 151 bits (366), Expect = 7e-37
Identities = 71/115 (61%), Positives = 85/115 (73%)
Frame = +1
Query: 115 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 294
M RKF VGGNWKMNGD ++ IV L + +V+V+V PA YL+Y K+ + V V
Sbjct: 1 MTRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLV 60
Query: 295 AAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHA 459
AAQNC+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK HA
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHA 115
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2
Query: 464 ESGLKVIACIGETLEXRESGKTEEVVFRQLKA 559
E+G+KV+ CIGE LE RE+G T++V FRQL+A
Sbjct: 117 EAGIKVVFCIGEKLEEREAGHTKDVNFRQLQA 148
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 588 NIVLAYEPVXAIGTGK 635
NIV+AYEPV AIGTGK
Sbjct: 158 NIVIAYEPVWAIGTGK 173
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 166 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 291
++INE+V+ + K L P E++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 166 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 291
++INE+V+ + K L P E++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 166 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 291
++INE+V+ + K L P E++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical
protein C27A2.4 protein.
Length = 678
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 390 KYNPIYSNVFDHSG*NFTSKSSFWRLPTVLGC 295
K N ++S + +H+G + +FWR+P L C
Sbjct: 171 KVNSLFSKLSEHTG-EVINADNFWRIPDTLRC 201
>AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion
transporter SULP-1b protein.
Length = 729
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 64 DTRYFV*KVGSSNKITEMGRKFVVGGNWKMNGDKNQINEIV 186
DTRY K TE+ ++F +G NW + N +I+
Sbjct: 24 DTRYNFAKYRKKKTNTELAKQFAIGDNWILYQSPNPWTQIL 64
>AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion
transporter SULP-1a protein.
Length = 729
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 64 DTRYFV*KVGSSNKITEMGRKFVVGGNWKMNGDKNQINEIV 186
DTRY K TE+ ++F +G NW + N +I+
Sbjct: 24 DTRYNFAKYRKKKTNTELAKQFAIGDNWILYQSPNPWTQIL 64
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 157 GDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIP 279
GD N I+++++ +EV+ G PAI+ + V+ I+P
Sbjct: 47 GDSNYQEHIISDVEPQDFQKFLEVVHGEPAIFEATVQKILP 87
>AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate permease
family protein 1 protein.
Length = 729
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 64 DTRYFV*KVGSSNKITEMGRKFVVGGNWKMNGDKNQINEIV 186
DTRY K TE+ ++F +G NW + N +I+
Sbjct: 24 DTRYNFAKYRKKKTNTELAKQFAIGDNWILYQSPNPWTQIL 64
>AF016414-6|AAG24022.1| 323|Caenorhabditis elegans Serpentine
receptor, class h protein211 protein.
Length = 323
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 197 FRLLTISLI*FLSPFIFQLPPTTNLRPISVILFELPTFQTKYR 69
F +L I + + PFIFQ+P P V+L +LPT + Y+
Sbjct: 139 FVILYIVALTYFIPFIFQVPDPEISVP--VVLMQLPTLRCFYK 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,218,556
Number of Sequences: 27780
Number of extensions: 330845
Number of successful extensions: 738
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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