Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_M21
         (939 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0904 + 25832026-25832643                                         29   7.1  
02_02_0280 - 8515894-8517309                                           29   7.1  
08_01_1011 + 10226160-10226676,10226794-10226810,10227677-102278...    28   9.3  
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320...    28   9.3  

>06_03_0904 + 25832026-25832643
          Length = 205

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = +1

Query: 97  MSQIAEEQKLEESDGLPPASSSSI-AAQEKPR 189
           M Q+A++  LE S GLP A++ +I AA+EK +
Sbjct: 156 MQQVADDYGLEVSVGLPQAAAHAIPAAKEKEK 187


>02_02_0280 - 8515894-8517309
          Length = 471

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 224 STLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDG 355
           + + +KT++ ++    G+G +  R     KN    T + SGG G
Sbjct: 379 AAMAQKTSDTIAQAGHGAGEAKNRAAESGKNSSATTTIGSGGGG 422


>08_01_1011 +
           10226160-10226676,10226794-10226810,10227677-10227886,
           10227921-10228406
          Length = 409

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 371 RTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEALSNED 517
           +T+L  I   + D D+    D  +SE  + +D    + ++DE++LS+ED
Sbjct: 243 KTSLGQIAYSEWDEDE-IDEDPLNSEDEIDEDPLNSEDEIDEDSLSSED 290


>04_03_0582 +
           17528335-17529790,17529913-17531651,17531814-17532035,
           17532062-17533525
          Length = 1626

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +2

Query: 365 LERTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGK---IQHQVDEEALSNEDVEPAPV 535
           L+     G+P   D+   GWR      + +++ D+ +    + QV        D  P  +
Sbjct: 629 LQDLGFKGVPHTYDNRRDGWRNVKVRLDRAVADDKWRDLFPEAQVSHLVSPCSDHSPI-L 687

Query: 536 YDFRAIEETAPRDKCLY 586
            +F   + T PR KCL+
Sbjct: 688 LEFIVKDTTRPRQKCLH 704


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,143,926
Number of Sequences: 37544
Number of extensions: 473041
Number of successful extensions: 1395
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)