Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_M18
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0212 + 1412202-1412418,1412789-1412853,1413015-1413063,141...    77   3e-14
05_03_0603 - 16117695-16118396,16118679-16118939,16120100-161201...    31   1.7  
05_01_0149 + 989698-991797                                             30   2.2  
03_02_0583 + 9635002-9637299                                           29   3.8  
04_04_0329 + 24449574-24449633,24450261-24450320,24450510-244505...    29   5.1  
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458...    29   6.7  
03_06_0386 + 33555682-33556344,33557138-33557299                       29   6.7  

>02_01_0212 +
           1412202-1412418,1412789-1412853,1413015-1413063,
           1413775-1413869,1414024-1414109,1414185-1414244,
           1414322-1414403,1415228-1415341,1415444-1415608
          Length = 310

 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 2/201 (0%)
 Frame = +3

Query: 258 RENNERRGKEVLELWDVVLREDV--NKLGNEKHVILEQVIYAALDCHMYCIAMLCLVMLS 431
           R    RR + VL L   +L +    ++L +E+  + EQV  AA+DC    +A  C+ +LS
Sbjct: 42  RRLRARRPEPVLRLGLALLNDSSARSRLASEQWTLYEQVAVAAMDCQRLDVAKDCIGVLS 101

Query: 432 NEFPGSLRVMKLKAAVLEAEEKFDEALELLDNIIKVDETNSXXXXXXXXXXXXQGYIVEA 611
            +FPGS+RV +L+A + EA+ ++ +A      I++ +  +             QG +  A
Sbjct: 102 KQFPGSMRVGRLEALLFEAKGEWTDAERAYALILENNPFDQIVHKRKIAIAKAQGDMALA 161

Query: 612 IKELVDYLKKLCQMWKPGKSFATCTFRFRTTLVPCPAPXNYSSISLTXHLHHQRLTDIRY 791
           ++ L  YL+         +  A      +                 T  L+H    ++ Y
Sbjct: 162 VEYLNKYLELFMADHDAWRELAETYVALQMYKQAAFCYEELILAQPTVPLYHLAYAEVLY 221

Query: 792 TMGGIQNLELAKLFYCQSVKL 854
           TMGG++NL+ A+ +Y  +++L
Sbjct: 222 TMGGLENLQTARKYYASTIQL 242


>05_03_0603 -
           16117695-16118396,16118679-16118939,16120100-16120144,
           16120362-16120453,16120568-16120706,16121027-16121063,
           16121147-16121434,16122000-16122074,16122505-16122581,
           16123092-16123256,16123387-16123543,16124558-16124733,
           16124828-16124940,16125398-16125428,16126487-16126605,
           16126696-16126789,16127384-16127458,16127548-16127666,
           16127751-16127907,16129252-16129398
          Length = 1022

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +3

Query: 369 IYAALDCHMYCIAM-LCLVMLSNEFPGSLRVMKLKAAVLEAEEKFDEALELLDN 527
           I+ A+D   Y  A+ LC  +L+   P S  V+ LK  +LE   K DEAL +  N
Sbjct: 19  IWDAVDSRQYKAALKLCTALLAKH-PTSPYVLALKGLILERMGKPDEALSVCLN 71


>05_01_0149 + 989698-991797
          Length = 699

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 350 VFLVSKFVYI--FSENHIPKF*HFFASPLIVFPPLTEKILCFIVAYFFVI 207
           VF+  + +Y+   + N   +  + FA+ ++ FPPL    L F V  FF +
Sbjct: 465 VFVQERHIYLRETAHNAYRRLSYVFANAVVAFPPLVFLSLAFAVTTFFAV 514


>03_02_0583 + 9635002-9637299
          Length = 765

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 350 VFLVSKFVYI--FSENHIPKF*HFFASPLIVFPPLTEKILCFIVAYFFVI 207
           VFLV +++Y+   + N   +  +  ++ ++ FPPL    L F    FF +
Sbjct: 530 VFLVERYIYLRETAHNAYRRSSYTVSNAIVAFPPLVALSLAFTAITFFAV 579


>04_04_0329 +
           24449574-24449633,24450261-24450320,24450510-24450562,
           24450913-24450973,24451481-24451666,24451877-24451984,
           24452196-24453418,24453571-24454405
          Length = 861

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +3

Query: 261 ENNERRGKEVLELWDVVLREDVNKLGNEKHVILEQVIYAALD 386
           EN+E+  +   ELW  VL +D ++  +E+  ++EQ+ +   D
Sbjct: 494 ENSEKVAEATCELWLRVLSKDDDECVDEQREVIEQIRFLLKD 535


>08_01_0527 +
           4580599-4580818,4580933-4581806,4581891-4581955,
           4582055-4582110,4582955-4583058,4583310-4583382,
           4583474-4583654,4584537-4584622
          Length = 552

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 749 EADGGVVXRRRTRHESSPEPEGTGCKALA 663
           ++DGG+  RRR     SPE  G G K L+
Sbjct: 119 DSDGGLTGRRRRNDTPSPERGGAGRKDLS 147


>03_06_0386 + 33555682-33556344,33557138-33557299
          Length = 274

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 649 RCGSLARALQPVPSGSGLLSCRVLRR 726
           +CGS+   + P P GSG+++ RV ++
Sbjct: 170 KCGSVTVRMVPAPRGSGIVAARVPKK 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,510,704
Number of Sequences: 37544
Number of extensions: 448733
Number of successful extensions: 1124
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)