Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_M16
(916 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 36 0.16
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 36 0.16
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 36 0.16
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 36 0.16
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 36 0.16
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 35 0.47
L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1... 35 0.47
X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein. 33 1.1
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 33 1.4
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 33 1.4
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 33 1.4
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 33 1.4
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 33 1.4
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 33 1.4
BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein. 33 1.9
X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1 p... 32 2.5
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 32 3.3
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 32 3.3
BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein. 31 4.4
BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein. 31 4.4
BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger ... 31 4.4
BC016169-1|AAH16169.1| 333|Homo sapiens GIPC PDZ domain contain... 31 5.8
BC012810-1|AAH12810.1| 333|Homo sapiens GIPC PDZ domain contain... 31 5.8
BC000410-1|AAH00410.1| 333|Homo sapiens GIPC PDZ domain contain... 31 5.8
AF089816-1|AAC67548.1| 333|Homo sapiens RGS-GAIP interacting pr... 31 5.8
X95677-1|CAA64980.1| 299|Homo sapiens argBPIB protein. 31 7.7
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 7.7
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 36.3 bits (80), Expect = 0.16
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +3
Query: 405 GRPXPXXXXGNPPXXXXGYGXXGXXGPXHPXPKKXPPPPXGXFFXWAGXGXGXPILXTPX 584
G+P PP GYG P P P++ PPPP G F G P+ P
Sbjct: 285 GQPPLGPLPPGPPPPVPGYGPP----PGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPP 340
Query: 585 P 587
P
Sbjct: 341 P 341
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 36.3 bits (80), Expect = 0.16
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +3
Query: 405 GRPXPXXXXGNPPXXXXGYGXXGXXGPXHPXPKKXPPPPXGXFFXWAGXGXGXPILXTPX 584
G+P PP GYG P P P++ PPPP G F G P+ P
Sbjct: 285 GQPPLGPLPPGPPPPVPGYGPP----PGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPP 340
Query: 585 P 587
P
Sbjct: 341 P 341
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 36.3 bits (80), Expect = 0.16
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +3
Query: 405 GRPXPXXXXGNPPXXXXGYGXXGXXGPXHPXPKKXPPPPXGXFFXWAGXGXGXPILXTPX 584
G+P PP GYG P P P++ PPPP G F G P+ P
Sbjct: 212 GQPPLGPLPPGPPPPVPGYGPP----PGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPP 267
Query: 585 P 587
P
Sbjct: 268 P 268
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 36.3 bits (80), Expect = 0.16
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +3
Query: 405 GRPXPXXXXGNPPXXXXGYGXXGXXGPXHPXPKKXPPPPXGXFFXWAGXGXGXPILXTPX 584
G+P PP GYG P P P++ PPPP G F G P+ P
Sbjct: 322 GQPPLGPLPPGPPPPVPGYGPP----PGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPP 377
Query: 585 P 587
P
Sbjct: 378 P 378
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 36.3 bits (80), Expect = 0.16
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +3
Query: 405 GRPXPXXXXGNPPXXXXGYGXXGXXGPXHPXPKKXPPPPXGXFFXWAGXGXGXPILXTPX 584
G+P PP GYG P P P++ PPPP G F G P+ P
Sbjct: 285 GQPPLGPLPPGPPPPVPGYGPP----PGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPP 340
Query: 585 P 587
P
Sbjct: 341 P 341
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 34.7 bits (76), Expect = 0.47
Identities = 27/96 (28%), Positives = 32/96 (33%), Gaps = 2/96 (2%)
Frame = +1
Query: 412 PXRXGXXETRPXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYS-THXHH 588
P R P T W P++ + P G GPG G +S H
Sbjct: 346 PARPANNPPPPSLMSTTQSRPPWMNSGPSESR---PYHGMHGGGPGGPGGGPHSFPHPLP 402
Query: 589 XRXGGGGGXHRXXXP-XPPPPQXXVTPXPXEGGXNP 693
GG GG P PPPP P P G +P
Sbjct: 403 SLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHP 438
>L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1
protein.
Length = 571
Score = 34.7 bits (76), Expect = 0.47
Identities = 27/96 (28%), Positives = 32/96 (33%), Gaps = 2/96 (2%)
Frame = +1
Query: 412 PXRXGXXETRPXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYS-THXHH 588
P R P T W P++ + P G GPG G +S H
Sbjct: 346 PARPANNPPPPSLMSTTQSRPPWMNSGPSESR---PYHGMHGGGPGGPGGGPHSFPHPLP 402
Query: 589 XRXGGGGGXHRXXXP-XPPPPQXXVTPXPXEGGXNP 693
GG GG P PPPP P P G +P
Sbjct: 403 SLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHP 438
>X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein.
Length = 234
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/100 (28%), Positives = 33/100 (33%)
Frame = +1
Query: 403 QAGPXRXGXXETRPXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYSTHX 582
Q P G E P + + G P TP + + P P G GP G
Sbjct: 56 QGPPPHPGKPERPPPQGGNQSQG---PPPTPGKPEGPPPQGGNQSQGPPPHPGKP----- 107
Query: 583 HHXRXGGGGGXHRXXXPXPPPPQXXVTPXPXEGGXNPXPP 702
GG HR PPPP P P G + PP
Sbjct: 108 ERPPPQGGNQSHRP----PPPPGKPERPPPQGGNQSQGPP 143
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 33.1 bits (72), Expect = 1.4
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +1
Query: 442 PXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYS-THXHHXRXGGGGGXH 618
P T W P++ + P G GPG G +S H GG GG
Sbjct: 356 PSLMSTTQSRPPWMNSGPSESR---PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHP 412
Query: 619 RXXXP-XPPPPQXXVTPXPXEGGXNP 693
P PPPP P P G +P
Sbjct: 413 MQHNPNGPPPPWMQPPPPPMNQGPHP 438
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 33.1 bits (72), Expect = 1.4
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +1
Query: 442 PXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYS-THXHHXRXGGGGGXH 618
P T W P++ + P G GPG G +S H GG GG
Sbjct: 356 PSLMSTTQSRPPWMNSGPSESR---PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHP 412
Query: 619 RXXXP-XPPPPQXXVTPXPXEGGXNP 693
P PPPP P P G +P
Sbjct: 413 MQHNPNGPPPPWMQPPPPPMNQGPHP 438
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 33.1 bits (72), Expect = 1.4
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +1
Query: 442 PXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYS-THXHHXRXGGGGGXH 618
P T W P++ + P G GPG G +S H GG GG
Sbjct: 481 PSLMSTTQSRPPWMNSGPSESR---PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHP 537
Query: 619 RXXXP-XPPPPQXXVTPXPXEGGXNP 693
P PPPP P P G +P
Sbjct: 538 MQHNPNGPPPPWMQPPPPPMNQGPHP 563
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 33.1 bits (72), Expect = 1.4
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +1
Query: 442 PXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYS-THXHHXRXGGGGGXH 618
P T W P++ + P G GPG G +S H GG GG
Sbjct: 356 PSLMSTTQSRPPWMNSGPSESR---PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHP 412
Query: 619 RXXXP-XPPPPQXXVTPXPXEGGXNP 693
P PPPP P P G +P
Sbjct: 413 MQHNPNGPPPPWMQPPPPPMNQGPHP 438
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 33.1 bits (72), Expect = 1.4
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +1
Query: 442 PXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYS-THXHHXRXGGGGGXH 618
P T W P++ + P G GPG G +S H GG GG
Sbjct: 356 PSLMSTTQSRPPWMNSGPSESR---PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHP 412
Query: 619 RXXXP-XPPPPQXXVTPXPXEGGXNP 693
P PPPP P P G +P
Sbjct: 413 MQHNPNGPPPPWMQPPPPPMNQGPHP 438
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 33.1 bits (72), Expect = 1.4
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +1
Query: 442 PXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYS-THXHHXRXGGGGGXH 618
P T W P++ + P G GPG G +S H GG GG
Sbjct: 356 PSLMSTTQSRPPWMNSGPSESR---PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHP 412
Query: 619 RXXXP-XPPPPQXXVTPXPXEGGXNP 693
P PPPP P P G +P
Sbjct: 413 MQHNPNGPPPPWMQPPPPPMNQGPHP 438
>BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 32.7 bits (71), Expect = 1.9
Identities = 28/109 (25%), Positives = 33/109 (30%), Gaps = 9/109 (8%)
Frame = +1
Query: 403 QAGPXRXGXXETRPXXSKDTAXGGXWXPDTP--------NQKKXPXPPXGXFXFGPGXGX 558
Q P R G E +P + + G P P NQ + P P G P G
Sbjct: 174 QGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGSPSQGG 233
Query: 559 GXQYSTHXHHXRXGGGGGXHRXXXPXPPPPQXXVTPXPXEGG-XNPXPP 702
H + G PPPP P P G P PP
Sbjct: 234 NKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPP 282
>X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1
protein.
Length = 309
Score = 32.3 bits (70), Expect = 2.5
Identities = 28/109 (25%), Positives = 33/109 (30%), Gaps = 9/109 (8%)
Frame = +1
Query: 403 QAGPXRXGXXETRPXXSKDTAXGGXWXPDTP--------NQKKXPXPPXGXFXFGPGXGX 558
Q P R G E P + + G P P NQ + P P G P G
Sbjct: 174 QGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGSPSQGG 233
Query: 559 GXQYSTHXHHXRXGGGGGXHRXXXPXPPPPQXXVTPXPXEGG-XNPXPP 702
H + G PPPP+ P P G P PP
Sbjct: 234 NKPRGPPPHPGKPQGPPPQEGNKPQRPPPPRRPQGPPPPGGNPQQPLPP 282
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 31.9 bits (69), Expect = 3.3
Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Frame = +1
Query: 442 PXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYS-THXHHXRXGGGGGXH 618
P T W P++ P G GPG G +S H GG GG
Sbjct: 356 PSLMSTTQSRPPWMNSGPSES---WPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHP 412
Query: 619 RXXXP-XPPPPQXXVTPXPXEGGXNP 693
P PPPP P P G +P
Sbjct: 413 MQHNPNGPPPPWMQPPPPPMNQGPHP 438
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 31.9 bits (69), Expect = 3.3
Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Frame = +1
Query: 442 PXXSKDTAXGGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYS-THXHHXRXGGGGGXH 618
P T W P++ P G GPG G +S H GG GG
Sbjct: 356 PSLMSTTQSRPPWMNSGPSES---WPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHP 412
Query: 619 RXXXP-XPPPPQXXVTPXPXEGGXNP 693
P PPPP P P G +P
Sbjct: 413 MQHNPNGPPPPWMQPPPPPMNQGPHP 438
>BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 31.5 bits (68), Expect = 4.4
Identities = 28/109 (25%), Positives = 32/109 (29%), Gaps = 9/109 (8%)
Frame = +1
Query: 403 QAGPXRXGXXETRPXXSKDTAXGGXWXPDTP--------NQKKXPXPPXGXFXFGPGXGX 558
Q P R G E P + + G P P NQ + P P G P G
Sbjct: 174 QGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGSPSQGG 233
Query: 559 GXQYSTHXHHXRXGGGGGXHRXXXPXPPPPQXXVTPXPXEGG-XNPXPP 702
H + G PPPP P P G P PP
Sbjct: 234 NKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPP 282
>BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 31.5 bits (68), Expect = 4.4
Identities = 28/109 (25%), Positives = 32/109 (29%), Gaps = 9/109 (8%)
Frame = +1
Query: 403 QAGPXRXGXXETRPXXSKDTAXGGXWXPDTP--------NQKKXPXPPXGXFXFGPGXGX 558
Q P R G E P + + G P P NQ + P P G P G
Sbjct: 174 QGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGSPSQGG 233
Query: 559 GXQYSTHXHHXRXGGGGGXHRXXXPXPPPPQXXVTPXPXEGG-XNPXPP 702
H + G PPPP P P G P PP
Sbjct: 234 NKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPP 282
>BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger
protein 162 protein.
Length = 265
Score = 31.5 bits (68), Expect = 4.4
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = +1
Query: 517 PPXGXFXFGPGXGXGXQYS-THXHHXRXGGGGGXHRXXXP-XPPPPQXXVTPXPXEGGXN 690
P G GPG G +S H GG GG P PPPP P P G +
Sbjct: 4 PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPH 63
Query: 691 P 693
P
Sbjct: 64 P 64
>BC016169-1|AAH16169.1| 333|Homo sapiens GIPC PDZ domain containing
family, member 1 protein.
Length = 333
Score = 31.1 bits (67), Expect = 5.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 674 LGXGVTXXCGGGGXGXXXRXXPPPPP 597
LG G GGGG G PPPPP
Sbjct: 27 LGVGEPGPLGGGGSGGPQMGLPPPPP 52
>BC012810-1|AAH12810.1| 333|Homo sapiens GIPC PDZ domain containing
family, member 1 protein.
Length = 333
Score = 31.1 bits (67), Expect = 5.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 674 LGXGVTXXCGGGGXGXXXRXXPPPPP 597
LG G GGGG G PPPPP
Sbjct: 27 LGVGEPGPLGGGGSGGPQMGLPPPPP 52
>BC000410-1|AAH00410.1| 333|Homo sapiens GIPC PDZ domain containing
family, member 1 protein.
Length = 333
Score = 31.1 bits (67), Expect = 5.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 674 LGXGVTXXCGGGGXGXXXRXXPPPPP 597
LG G GGGG G PPPPP
Sbjct: 27 LGVGEPGPLGGGGSGGPQMGLPPPPP 52
>AF089816-1|AAC67548.1| 333|Homo sapiens RGS-GAIP interacting
protein GIPC protein.
Length = 333
Score = 31.1 bits (67), Expect = 5.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 674 LGXGVTXXCGGGGXGXXXRXXPPPPP 597
LG G GGGG G PPPPP
Sbjct: 27 LGVGEPGPLGGGGSGGPQMGLPPPPP 52
>X95677-1|CAA64980.1| 299|Homo sapiens argBPIB protein.
Length = 299
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +1
Query: 469 GGXWXPDTPNQKKXPXPPXGXFXFGPGXGXGXQYSTHXHHXRXGGGGGXHRXXXPXPPPP 648
GG P QK P G G G + + R G G P P
Sbjct: 4 GGLPRTTPPTQKPPSPPMSGKGTLGSSGSSGGSHPSSRSSSRENSGSGSVGVPIAVPTPS 63
Query: 649 QXXVTPXP-XEGGXNPXPPTXA 711
V P P G P P T A
Sbjct: 64 PPSVFPAPACSAGTPPLPATSA 85
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 779 PXPGGAPPVSXKXXPPXKXXKXRPXXXGXXPWXXTPPPGXGPPXXP 916
P P A P PP P G P PPPG PP P
Sbjct: 339 PPPSSAGPPPPPPPPPLPNSPAPPNPGGPPP--APPPPGLAPPPPP 382
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,325,508
Number of Sequences: 237096
Number of extensions: 2454258
Number of successful extensions: 12154
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10972
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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