Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_M14
         (942 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.62 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   7.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.62
 Identities = 12/37 (32%), Positives = 13/37 (35%)
 Frame = +2

Query: 650 PXXXXKXPRXQTPPXXXPQXPLXPXKHPPXTXPXGXP 760
           P      P  Q PP   P  P+ P   P    P G P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGP 606



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 18/64 (28%), Positives = 18/64 (28%), Gaps = 1/64 (1%)
 Frame = +3

Query: 747 PGVXPPPXXXXXXXXX-LNPGPTTFXXXXXPPXXFPGXXXGXXPPPXXEXPTPPXPLXXS 923
           P   PPP          LNP    F          P       PPP      PP PL   
Sbjct: 545 PQFLPPPLNLLRAPFFPLNPAQLRFPAGFP---NLPNAQPPPAPPPPPPMGPPPSPLAGG 601

Query: 924 PPSG 935
           P  G
Sbjct: 602 PLGG 605


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 928 GGXXXXGFGGVGXSXXGGG 872
           GG    G GG+G S  GGG
Sbjct: 661 GGGGSVGSGGIGSSSLGGG 679


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 17/70 (24%), Positives = 18/70 (25%)
 Frame = +3

Query: 720 PXNTLPPXXPGVXPPPXXXXXXXXXLNPGPTTFXXXXXPPXXFPGXXXGXXPPPXXEXPT 899
           P N  PP       P            PG         PP   PG   G  P P      
Sbjct: 195 PGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGM 254

Query: 900 PPXPLXXSPP 929
              P+   PP
Sbjct: 255 QRPPMMGQPP 264


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 910 GFGGVGXSXXGGGXXPXXXPGKXXGG 833
           G GG G    GGG      PG   GG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGG 228


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 14/40 (35%), Positives = 15/40 (37%)
 Frame = +2

Query: 362 PVXPGTXKXPLPLXGGGXXXGGXPRPQXXXXXPPPXGXKG 481
           P  PG    P    GGG    G P P+       P G KG
Sbjct: 391 PGQPGIA-GPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKG 429


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,968
Number of Sequences: 2352
Number of extensions: 12186
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)