Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_M07
         (937 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.12 
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     27   1.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   4.4  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.9 bits (64), Expect = 0.12
 Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 4/76 (5%)
 Frame = +3

Query: 642 TFGPXGPXXGPXPXXXGPXWGVXXXGPPPPXAXXXXPXLXGGGXX---PRGXXKXXGF-P 809
           T GP GP   P P   G    +     PPP      P           P G        P
Sbjct: 524 TGGPLGPP--PPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQP 581

Query: 810 PXXPPGXPPXXPPXXP 857
           P  PP  PP  PP  P
Sbjct: 582 PPAPPPPPPMGPPPSP 597



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 21/76 (27%), Positives = 24/76 (31%)
 Frame = -2

Query: 459 PPPPPXDRXXKKXXRXGXNXFLPXXXGXPKTPXXPXXSPXNXFXPPXXXGGGPXXXXXXX 280
           PPPPP         +     FLP      + P  P  +P     P     G P       
Sbjct: 532 PPPPPGGAVLNIPPQ-----FLPPPLNLLRAPFFPL-NPAQLRFP----AGFPNLPNAQP 581

Query: 279 GXGPXXPPPKGGXPXP 232
              P  PPP G  P P
Sbjct: 582 PPAPPPPPPMGPPPSP 597



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 806 PPXXPPXGPPXXPPXXXP 859
           PP  PP GPP  P    P
Sbjct: 585 PPPPPPMGPPPSPLAGGP 602


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = +3

Query: 777 PRGXXKXXGFPPXXPPGXPPXXPPXXPXXXXXGXXXXPXPP 899
           P G     G P    PG PP  PP  P     G      PP
Sbjct: 72  PVGIFGRPGRPWWSVPGIPPFRPPWHPRPPFGGRPWWLRPP 112


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = +3

Query: 810 PXXPPGXPPXXPPXXPXXXXXGXXXXPXPPGGGG 911
           P  PPG     PP        G    P PP  GG
Sbjct: 183 PGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGG 216



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
 Frame = -2

Query: 828 PXGGXXGGXPXFFXXPGGXXPPXXGGGXFXWXPGGGGPXXKPP-XXAPXXGVXAPXXGPX 652
           P  G   G P     PG   PP  G       P  GG   +PP    P      P   P 
Sbjct: 181 PNPGMPPG-PQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPG 239

Query: 651 AQRXFPGXPP 622
            Q      PP
Sbjct: 240 MQPGMQPRPP 249


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 777  GXXPPXXGGGXFXWXPGGGGPXXKP 703
            G  PP  GGG      GGG P   P
Sbjct: 1297 GKQPPNDGGGAAAAAAGGGYPPLMP 1321


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = +3

Query: 612 PXNXGXPPGXTFGPXGPXXGPXPXXXGPXWGVXXXGPPP 728
           P   G PP    GP GP   P      P   V   G PP
Sbjct: 93  PGMPGAPP-LLMGPNGPLPPPMMGMRPPPMMVPTMGMPP 130



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
 Frame = +2

Query: 749 PPPXXGGXXPPGXXKXXGXPPXXPPXGPP---XXPPXXXP 859
           PPP  G   PP      G PP      PP     PP   P
Sbjct: 110 PPPMMGMRPPPMMVPTMGMPPMGLGMRPPVMSAAPPQLNP 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,248
Number of Sequences: 2352
Number of extensions: 12758
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)