Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_M06
         (948 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457298-1|CAG33579.1|  327|Homo sapiens RNF121 protein.              105   2e-22
BC117273-1|AAI17274.1|  317|Homo sapiens RNF121 protein protein.      105   2e-22
BC009672-1|AAH09672.2|  329|Homo sapiens RNF121 protein protein.      105   2e-22
AK023139-1|BAB14423.1|  327|Homo sapiens 1,4-N-acetylglucosaminy...   105   2e-22
BC034385-1|AAH34385.1|  328|Homo sapiens ring finger protein 175...   101   5e-21

>CR457298-1|CAG33579.1|  327|Homo sapiens RNF121 protein.
          Length = 327

 Score =  105 bits (253), Expect = 2e-22
 Identities = 43/91 (47%), Positives = 62/91 (68%)
 Frame = +1

Query: 229 ELTSEERLXYDHQKLHELHKGHESMHTXMVLILIGALVISQVVIVQWKKRHYRSYAFFTX 408
           +L+ EE+   +H ++H  H+GHE+MH  MVLILI  LV++Q+++VQWK+RH RSY   T 
Sbjct: 26  DLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTL 85

Query: 409 IAMWSIPVMIXFKNGWWRFVPIWSVFXLLTA 501
             MW +P+    K  WWRF+ IW +F  +TA
Sbjct: 86  FQMWVVPLYFTVKLHWWRFLVIWILFSAVTA 116


>BC117273-1|AAI17274.1|  317|Homo sapiens RNF121 protein protein.
          Length = 317

 Score =  105 bits (253), Expect = 2e-22
 Identities = 43/91 (47%), Positives = 62/91 (68%)
 Frame = +1

Query: 229 ELTSEERLXYDHQKLHELHKGHESMHTXMVLILIGALVISQVVIVQWKKRHYRSYAFFTX 408
           +L+ EE+   +H ++H  H+GHE+MH  MVLILI  LV++Q+++VQWK+RH RSY   T 
Sbjct: 16  DLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTL 75

Query: 409 IAMWSIPVMIXFKNGWWRFVPIWSVFXLLTA 501
             MW +P+    K  WWRF+ IW +F  +TA
Sbjct: 76  FQMWVVPLYFTVKLHWWRFLVIWILFSAVTA 106


>BC009672-1|AAH09672.2|  329|Homo sapiens RNF121 protein protein.
          Length = 329

 Score =  105 bits (253), Expect = 2e-22
 Identities = 43/91 (47%), Positives = 62/91 (68%)
 Frame = +1

Query: 229 ELTSEERLXYDHQKLHELHKGHESMHTXMVLILIGALVISQVVIVQWKKRHYRSYAFFTX 408
           +L+ EE+   +H ++H  H+GHE+MH  MVLILI  LV++Q+++VQWK+RH RSY   T 
Sbjct: 28  DLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTL 87

Query: 409 IAMWSIPVMIXFKNGWWRFVPIWSVFXLLTA 501
             MW +P+    K  WWRF+ IW +F  +TA
Sbjct: 88  FQMWVVPLYFTVKLHWWRFLVIWILFSAVTA 118


>AK023139-1|BAB14423.1|  327|Homo sapiens
           1,4-N-acetylglucosaminyltransferase IV.  protein.
          Length = 327

 Score =  105 bits (253), Expect = 2e-22
 Identities = 43/91 (47%), Positives = 62/91 (68%)
 Frame = +1

Query: 229 ELTSEERLXYDHQKLHELHKGHESMHTXMVLILIGALVISQVVIVQWKKRHYRSYAFFTX 408
           +L+ EE+   +H ++H  H+GHE+MH  MVLILI  LV++Q+++VQWK+RH RSY   T 
Sbjct: 26  DLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTL 85

Query: 409 IAMWSIPVMIXFKNGWWRFVPIWSVFXLLTA 501
             MW +P+    K  WWRF+ IW +F  +TA
Sbjct: 86  FQMWVVPLYFTVKLHWWRFLVIWILFSAVTA 116


>BC034385-1|AAH34385.1|  328|Homo sapiens ring finger protein 175
           protein.
          Length = 328

 Score =  101 bits (241), Expect = 5e-21
 Identities = 37/100 (37%), Positives = 67/100 (67%)
 Frame = +1

Query: 202 PVDPNKTYQELTSEERLXYDHQKLHELHKGHESMHTXMVLILIGALVISQVVIVQWKKRH 381
           P     ++ +L++E+      ++++++H+GH+SMH  M+LI +  LVI+Q+V+VQW++RH
Sbjct: 18  PQQEQLSHTKLSAEDTWNLQQERMYKMHRGHDSMHVEMILIFLCVLVIAQIVLVQWRQRH 77

Query: 382 YRSYAFFTXIAMWSIPVMIXFKNGWWRFVPIWSVFXLLTA 501
            RSY   T + MW +P+    K  WWRF+ +W +F ++T+
Sbjct: 78  GRSYNLVTLLQMWVVPLYFTIKLYWWRFLSMWGMFSVITS 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,380,013
Number of Sequences: 237096
Number of extensions: 1375915
Number of successful extensions: 1824
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1824
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)