Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_M06
         (948 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-5|CAA86743.1|  409|Caenorhabditis elegans Hypothetical pr...   102   4e-22
U64852-6|AAB04969.1|  359|Caenorhabditis elegans Hypothetical pr...    30   2.8  

>Z46787-5|CAA86743.1|  409|Caenorhabditis elegans Hypothetical
           protein C16C10.5 protein.
          Length = 409

 Score =  102 bits (244), Expect = 4e-22
 Identities = 39/91 (42%), Positives = 63/91 (69%)
 Frame = +1

Query: 229 ELTSEERLXYDHQKLHELHKGHESMHTXMVLILIGALVISQVVIVQWKKRHYRSYAFFTX 408
           ELT EE+   +H+K+HE HKGHE+MH  M++I + ++++ Q+ +V WK++H++SY   T 
Sbjct: 96  ELTEEEQWAEEHRKMHEKHKGHEAMHMEMMVIFMISVIVGQIFLVTWKRKHFKSYQMCTL 155

Query: 409 IAMWSIPVMIXFKNGWWRFVPIWSVFXLLTA 501
           I M +IPV + F   W+RF+  W VF + +A
Sbjct: 156 IGMLTIPVYVCFNRSWYRFLATWLVFCIFSA 186


>U64852-6|AAB04969.1|  359|Caenorhabditis elegans Hypothetical
           protein W01A11.2 protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
 Frame = +1

Query: 355 VIVQWKKRHYRSYAFFTXIAMWSI-PVM-------IXFKNGWWRFVPIWSVF 486
           ++V WK+R   + A    I MW I P+M       + F   WW  VP+++V+
Sbjct: 30  LLVPWKRR-LETLAVMGFIFMWVILPIMDLWVPFHVLFNTRWWFLVPLYAVW 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,882,031
Number of Sequences: 27780
Number of extensions: 198759
Number of successful extensions: 312
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)