Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_M03
         (943 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    29   0.27 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.47 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.62 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.82 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.82 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          26   1.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.8  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 28.7 bits (61), Expect = 0.27
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +1

Query: 379 PXFXXPAPGGGGGX-XXGKGXTAXPPPXGXXVXGPXGPPP 495
           P +   A GGGGG    G    A PP  G    G  G PP
Sbjct: 118 PYYGATAGGGGGGYGHQGSMMRAMPPELGMYGGGCYGSPP 157


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 0.47
 Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
 Frame = +1

Query: 346 PPXXXXXPPXPPXFXXPA-PGGGGGXXXGKGXTAXPPPXGXXVXGPXGPPPSXKPXPXGP 522
           PP      P PP    P  P    G   G      P P      G   PP   +P P  P
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPS--AQGMQRPPMMGQPPPIRP 268

Query: 523 PXGGGGXPP 549
           P   GG  P
Sbjct: 269 PNPMGGPRP 277



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 15/48 (31%), Positives = 15/48 (31%)
 Frame = +1

Query: 478 PXGPPPSXKPXPXGPPXGGGGXPPXXGGXXVPPXPGXXXXKPXKPGGP 621
           P  P P   P P      G   PP  G    P  P      P  PG P
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVP 225



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +1

Query: 448 PPPXGXXVXGPXGPPPSXKPXPXGPPXGGGGXPPXXG 558
           P P      G  GPP +  P    PP  GG  P   G
Sbjct: 187 PGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPG 223



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 22/84 (26%), Positives = 23/84 (27%)
 Frame = +1

Query: 370 PXPPXFXXPAPGGGGGXXXGKGXTAXPPPXGXXVXGPXGPPPSXKPXPXGPPXGGGGXPP 549
           P  P    P PG  G    G      PP  G        P P   P P  P    G  P 
Sbjct: 186 PPGPQMMRP-PGNVGPPRTGTPTQPQPPRPGGMY-----PQPPGVPMPMRPQMPPGAVPG 239

Query: 550 XXGGXXVPPXPGXXXXKPXKPGGP 621
              G    P       +P   G P
Sbjct: 240 MQPGMQPRPPSAQGMQRPPMMGQP 263



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 26/100 (26%), Positives = 28/100 (28%), Gaps = 15/100 (15%)
 Frame = +1

Query: 295 QPPXKXXXXRXXXXXXXPPXXXXXPPXPPXFXXPAPGGGGGXXXGKGXTAXP-PPXGXXV 471
           +PP      R       PP     P   P                 G    P PP     
Sbjct: 247 RPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQG 306

Query: 472 XGPXGPPPSXKP----XPXG------PPXG----GGGXPP 549
             P GPP   +P     P G      PP G    GGG PP
Sbjct: 307 GAPGGPPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPP 346


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 27.5 bits (58), Expect = 0.62
 Identities = 21/68 (30%), Positives = 21/68 (30%)
 Frame = +1

Query: 346 PPXXXXXPPXPPXFXXPAPGGGGGXXXGKGXTAXPPPXGXXVXGPXGPPPSXKPXPXGPP 525
           PP     PP P     P   G      G      PP  G        PPP   P    PP
Sbjct: 79  PPPTMNMPPRPGMI--PGMPGAPPLLMGPNGPLPPPMMGMR------PPPMMVPTMGMPP 130

Query: 526 XGGGGXPP 549
            G G  PP
Sbjct: 131 MGLGMRPP 138


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.82
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +1

Query: 451 PPXGXXVXGPXGPPPSXKPXPXGPPXGGGGXPP 549
           PP       P GPPPS  P   GP  G  G  P
Sbjct: 581 PPPAPPPPPPMGPPPS--PLAGGPLGGPAGSRP 611



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 14/49 (28%), Positives = 15/49 (30%)
 Frame = +1

Query: 367 PPXPPXFXXPAPGGGGGXXXGKGXTAXPPPXGXXVXGPXGPPPSXKPXP 513
           PP PP    P     GG   G   +  P P      G   P     P P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPYP 633



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
 Frame = +1

Query: 478 PXGPPPSXKPXPXGPPXGG-GGXPPXXGGXXVPPXP 582
           P  PPP   P P GPP     G P        PP P
Sbjct: 582 PPAPPP---PPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 11/33 (33%), Positives = 12/33 (36%)
 Frame = +1

Query: 451 PPXGXXVXGPXGPPPSXKPXPXGPPXGGGGXPP 549
           PP      GP G P   +P        GG  PP
Sbjct: 593 PPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +2

Query: 338 PKXPPXPXXXPXPPXXFXXXPRGGGGG 418
           P  PP P     PP      P GG  G
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAG 608


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.1 bits (57), Expect = 0.82
 Identities = 19/64 (29%), Positives = 20/64 (31%)
 Frame = +1

Query: 394 PAPGGGGGXXXGKGXTAXPPPXGXXVXGPXGPPPSXKPXPXGPPXGGGGXPPXXGGXXVP 573
           P   G  G    KG     P       GP GPP          P G  G P   G   +P
Sbjct: 689 PGMSGLNGAPGEKGQKGETPQLPPQRKGPPGPP------GFNGPKGDKGLPGLAGPAGIP 742

Query: 574 PXPG 585
             PG
Sbjct: 743 GAPG 746



 Score = 26.2 bits (55), Expect = 1.4
 Identities = 20/61 (32%), Positives = 20/61 (32%)
 Frame = +2

Query: 476 GPGGXPLPXNPXPXAPXXGGGGXPPXXGEXGXPPPXGXXXKNPXNRGAPXGPXXXKKXPG 655
           GP G   P  P       G  G     G  G P P G        RG P GP   K   G
Sbjct: 582 GPSGPSGPLGPQGEKGDRGDSGLMGRPGNDGLPGPQG-------QRGLP-GPQGEKGDQG 633

Query: 656 P 658
           P
Sbjct: 634 P 634



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 20/72 (27%), Positives = 20/72 (27%)
 Frame = +1

Query: 406 GGGGXXXGKGXTAXPPPXGXXVXGPXGPPPSXKPXPXGPPXGGGGXPPXXGGXXVPPXPG 585
           G  G    KG    P        GP G P    P       G  G P   G    P   G
Sbjct: 84  GAPGLPGSKGVKGDPGLSMVGPPGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKG 143

Query: 586 XXXXKPXKPGGP 621
                P  PG P
Sbjct: 144 -DLGTPGPPGYP 154



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 27/85 (31%), Positives = 28/85 (32%), Gaps = 12/85 (14%)
 Frame = +1

Query: 367 PPXP---PXFXXPAPGGGGGXXXGK----GXTAXPPPXGXX-VXGPXGPP----PSXKPX 510
           PP P   P    P    GG    G     G    P   G     GP G P    P  +P 
Sbjct: 105 PPGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPGYPGDVGPKGEPG 164

Query: 511 PXGPPXGGGGXPPXXGGXXVPPXPG 585
           P G P G  G P   G   V   PG
Sbjct: 165 PKG-PAGHPGAPGRPGVDGVKGLPG 188



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 13/42 (30%), Positives = 14/42 (33%)
 Frame = +2

Query: 530 GGGGXPPXXGEXGXPPPXGXXXKNPXNRGAPXGPXXXKKXPG 655
           G  G P   GE G P       + P     P GP   K   G
Sbjct: 559 GRDGPPGLTGEKGEPGLPVWKDRGPSGPSGPLGPQGEKGDRG 600


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 848  GGSPXSKXGXXPVSPRGPXGXXKG 777
            GGSP  +    PV+PR P G   G
Sbjct: 1106 GGSPRPETPAFPVTPRTPYGLSNG 1129


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 403 GGGGGXXXGKGXTAXPPP 456
           GGGGG   G G T   PP
Sbjct: 555 GGGGGGVIGSGSTTRLPP 572


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
 Frame = +1

Query: 379 PXFXXPAPGG----GGGXXXGKGXTAXPPPXGXXVXGPXGPPPSXKPXPXGPPXGGGGXP 546
           P    P+ GG    GGG   G G  A                   +P   G    GGG P
Sbjct: 154 PNAQNPSSGGRSSSGGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGG-GSGGGAP 212

Query: 547 PXXGGXXVPPXPG 585
              GG    P PG
Sbjct: 213 GGGGGSSGGPGPG 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.152    0.529 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,267
Number of Sequences: 2352
Number of extensions: 12815
Number of successful extensions: 82
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)