BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_M02
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y18287-2|CAB50735.1| 686|Homo sapiens MASP-2 protein. 32 3.3
Y18286-2|CAB50733.1| 686|Homo sapiens MASP-2 protein protein. 32 3.3
Y09926-1|CAA71059.1| 686|Homo sapiens MASP-2 protein protein. 32 3.3
X98400-1|CAA67050.1| 686|Homo sapiens mannan-binding lectin-ass... 32 3.3
AL109811-4|CAI22102.1| 686|Homo sapiens mannan-binding lectin s... 32 3.3
AJ300188-1|CAC15568.1| 323|Homo sapiens Masp-2 protein protein. 32 3.3
>Y18287-2|CAB50735.1| 686|Homo sapiens MASP-2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 509 EDSSPAPRNQCGVD--TXGDRIYGGQFTDLDEFPW 607
E S P CG+ T G RIYGGQ +FPW
Sbjct: 424 EKSLPVCEPVCGLSARTTGGRIYGGQKAKPGDFPW 458
>Y18286-2|CAB50733.1| 686|Homo sapiens MASP-2 protein protein.
Length = 686
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 509 EDSSPAPRNQCGVD--TXGDRIYGGQFTDLDEFPW 607
E S P CG+ T G RIYGGQ +FPW
Sbjct: 424 EKSLPVCEPVCGLSARTTGGRIYGGQKAKPGDFPW 458
>Y09926-1|CAA71059.1| 686|Homo sapiens MASP-2 protein protein.
Length = 686
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 509 EDSSPAPRNQCGVD--TXGDRIYGGQFTDLDEFPW 607
E S P CG+ T G RIYGGQ +FPW
Sbjct: 424 EKSLPVCEPVCGLSARTTGGRIYGGQKAKPGDFPW 458
>X98400-1|CAA67050.1| 686|Homo sapiens mannan-binding
lectin-associated serine protease-2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 509 EDSSPAPRNQCGVD--TXGDRIYGGQFTDLDEFPW 607
E S P CG+ T G RIYGGQ +FPW
Sbjct: 424 EKSLPVCEPVCGLSARTTGGRIYGGQKAKPGDFPW 458
>AL109811-4|CAI22102.1| 686|Homo sapiens mannan-binding lectin
serine peptidase 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 509 EDSSPAPRNQCGVD--TXGDRIYGGQFTDLDEFPW 607
E S P CG+ T G RIYGGQ +FPW
Sbjct: 424 EKSLPVCEPVCGLSARTTGGRIYGGQKAKPGDFPW 458
>AJ300188-1|CAC15568.1| 323|Homo sapiens Masp-2 protein protein.
Length = 323
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 509 EDSSPAPRNQCGVD--TXGDRIYGGQFTDLDEFPW 607
E S P CG+ T G RIYGGQ +FPW
Sbjct: 61 EKSLPVCEPVCGLSARTTGGRIYGGQKAKPGDFPW 95
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,331,678
Number of Sequences: 237096
Number of extensions: 1972659
Number of successful extensions: 4033
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4033
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -