Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_M02
(905 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 27 0.31
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 2.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 2.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 2.2
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 3.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 5.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 5.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 5.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 5.1
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 5.1
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 8.8
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 26.6 bits (56), Expect = 0.31
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 682 RYVLTAAHCLI 714
RYVLTAAHC+I
Sbjct: 196 RYVLTAAHCII 206
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/38 (23%), Positives = 23/38 (60%)
Frame = +2
Query: 488 TVDPTVPEDSSPAPRNQCGVDTXGDRIYGGQFTDLDEF 601
T++ E+++PAP++ +++YG +D+D++
Sbjct: 370 TINGRADEEAAPAPQHLIHPGKDINKLYGMTPSDIDKY 407
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/38 (23%), Positives = 23/38 (60%)
Frame = +2
Query: 488 TVDPTVPEDSSPAPRNQCGVDTXGDRIYGGQFTDLDEF 601
T++ E+++PAP++ +++YG +D+D++
Sbjct: 370 TINGRADEEAAPAPQHLIHPGKDINKLYGMTPSDIDKY 407
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/38 (23%), Positives = 23/38 (60%)
Frame = +2
Query: 488 TVDPTVPEDSSPAPRNQCGVDTXGDRIYGGQFTDLDEF 601
T++ E+++PAP++ +++YG +D+D++
Sbjct: 308 TINGRADEEAAPAPQHLIHPGKDINKLYGMTPSDIDKY 345
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.0 bits (47), Expect = 3.8
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -2
Query: 346 TLLCKGRCSKADNS*EQSYNXTHSLT-SPSG 257
T CKG C ++ N T+SL SP G
Sbjct: 456 TFCCKGYCMDLLKELSKTINFTYSLALSPDG 486
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 615 LLGYLTSXNTITYQC 659
L+G NTITYQC
Sbjct: 162 LIGMPGKKNTITYQC 176
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 615 LLGYLTSXNTITYQC 659
L+G NTITYQC
Sbjct: 162 LIGMPGKKNTITYQC 176
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 615 LLGYLTSXNTITYQC 659
L+G NTITYQC
Sbjct: 162 LIGMPGKKNTITYQC 176
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 615 LLGYLTSXNTITYQC 659
L+G NTITYQC
Sbjct: 162 LIGMPGKKNTITYQC 176
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 615 LLGYLTSXNTITYQC 659
L+G NTITYQC
Sbjct: 162 LIGMPGKKNTITYQC 176
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 615 LLGYLTSXNTITYQC 659
L+G NTITYQC
Sbjct: 162 LIGMPGKKNTITYQC 176
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 615 LLGYLTSXNTITYQC 659
L+G NTITYQC
Sbjct: 230 LIGMPGKKNTITYQC 244
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 615 LLGYLTSXNTITYQC 659
L+G NTITYQC
Sbjct: 230 LIGMPGKKNTITYQC 244
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 5.1
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +3
Query: 372 CGFQGIRTKSLLWAFTGATREADYATFKNNA 464
C QG+ T +++W ++ +Y + A
Sbjct: 731 CQAQGVPTPTIVWKKATGSKSGEYEELRERA 761
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 5.1
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +3
Query: 372 CGFQGIRTKSLLWAFTGATREADYATFKNNA 464
C QG+ T +++W ++ +Y + A
Sbjct: 727 CQAQGVPTPTIVWKKATGSKSGEYEELRERA 757
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 753 NRSPITDFLFDCTD 712
NRSP+ DF +D +D
Sbjct: 73 NRSPMVDFGYDISD 86
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -2
Query: 343 LLCKGRCSKADNS*EQSYNXTHS 275
L+ RC+ DN YN H+
Sbjct: 408 LIRNSRCANFDNQDNNHYNHNHN 430
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,824
Number of Sequences: 438
Number of extensions: 4023
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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