Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_L24
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22176-6|CAA80139.1|  133|Caenorhabditis elegans Hypothetical pr...    53   3e-07
Z35719-3|CAA84797.1|  347|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z68317-5|CAA92689.2|  165|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical...    29   6.1  

>Z22176-6|CAA80139.1|  133|Caenorhabditis elegans Hypothetical
           protein ZK1098.7 protein.
          Length = 133

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
 Frame = +1

Query: 268 Q*NLMTDPCWFDVYKAFPPITEPKY-ARPNLVVKEIRPILYKEDVLRAKFHSNGYGLAPV 444
           Q N    P W+DVY + PP+T P +  +     + IR I Y+EDVLRAKF+      A +
Sbjct: 26  QLNWADRPLWYDVYVSSPPLTPPDWNVKLAKYDEPIRSIFYEEDVLRAKFYKTYRSTAGI 85

Query: 445 SLLNQSNETQTKRLVQQYDELKAEG--IPEDEIIE 543
             ++ S  + +++ + +Y  +K+E     +D++ E
Sbjct: 86  Q-VDSSRTSVSQQFINEYKLVKSENAEATDDQLFE 119



 Score = 32.7 bits (71), Expect = 0.38
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +3

Query: 207 SRLERIGTIFTRVEGLLSRGAMKPDDRPL 293
           +R ER G IF+RV GL+  G +   DRPL
Sbjct: 6   TRAERSGNIFSRVTGLIRAGQLNWADRPL 34


>Z35719-3|CAA84797.1|  347|Caenorhabditis elegans Hypothetical
           protein F17C8.5 protein.
          Length = 347

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = -1

Query: 705 VLIL*SSTLFVG-ENIFYISFSQYLGCNGIRIFRCNI-QFLCSIAVAFDGYCLCGFLNDF 532
           + +L SS LF   ENI Y+S S Y G   I +F   I   + +  V F GYC+   ++D 
Sbjct: 213 ISLLSSSALFSSIENISYLS-SVYFGI--ITMFLIGIGDIVPTNLVWFSGYCMLFLISDV 269

Query: 531 IFRNAFCF 508
           +    F F
Sbjct: 270 LSNQIFYF 277


>Z68317-5|CAA92689.2|  165|Caenorhabditis elegans Hypothetical
           protein T01H3.5 protein.
          Length = 165

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 21/95 (22%), Positives = 43/95 (45%)
 Frame = +1

Query: 385 YKEDVLRAKFHSNGYGLAPVSLLNQSNETQTKRLVQQYDELKAEGIPEDEIIEKAAQAVA 564
           +K DVLR  F    YG++ + +LN+   ++  +L +  +    + I E+   EK    + 
Sbjct: 3   WKNDVLR--FSGFDYGVSKIRMLNEELHSECDQLSKSNESTSLKDITEEPKDEKLESIIE 60

Query: 565 VERHSYAAQKLNVTPKNPDSVTAQVLAEADIKNIF 669
             ++  + ++ N    N     A  + E  I+N +
Sbjct: 61  TAKNKESEKEENSHVFNDCEFDA--MTERKIENFY 93


>AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical
           protein T24C4.7 protein.
          Length = 798

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 457 QSNETQTKRLVQQYDELKAEGIPEDEIIEKAAQAVAVE-RHSYAAQKLNVTPKNP 618
           +  E +  ++    + +  EG+ E+EI+E +  A++ E    YA  K +  P  P
Sbjct: 694 EEEEEEPNQIPMASEHIDIEGVDEEEIMEHSVNAISEEILFEYADDKRDDGPSTP 748


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,701,286
Number of Sequences: 27780
Number of extensions: 355102
Number of successful extensions: 904
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)