Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_L23
         (910 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.72 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   5.1  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   5.1  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   5.1  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   6.7  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   8.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.4 bits (53), Expect = 0.72
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 535 SPWPTLAACVCYAYCAKELGPKLMANRK 618
           SP  T+A CVC   C +   P   +N K
Sbjct: 96  SPNSTIAVCVCMRKCPRRHRPVCASNGK 123



 Score = 23.4 bits (48), Expect = 2.9
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 598 KLMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMSGWWGHYD 726
           K  +N++   +++ L++YN A+ +       EYL+S  + HYD
Sbjct: 204 KECSNQEYEIMKDNLLLYNHARLMSQDNHSKEYLVSIMFSHYD 246


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 129 LSNLQNYKQNF*NRIISTHSRHHPTXTKX*GIPYSXXVL 13
           LS   +YK N+ + I   H +   T  +  G+P S  V+
Sbjct: 55  LSGEYDYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVI 93


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 129 LSNLQNYKQNF*NRIISTHSRHHPTXTKX*GIPYSXXVL 13
           LS   +YK N+ + I   H +   T  +  G+P S  V+
Sbjct: 55  LSGEYDYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVI 93


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 129 LSNLQNYKQNF*NRIISTHSRHHPTXTKX*GIPYSXXVL 13
           LS   +YK N+ + I   H +   T  +  G+P S  V+
Sbjct: 55  LSGEYDYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVI 93


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 120 LQNYKQNF*NRIISTHSRHHPTXTK 46
           L+N   N+ N  + TH +  PT  K
Sbjct: 41  LENLLMNYENNQLPTHGKGTPTVVK 65


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +1

Query: 541 WPTLAACVCYAYCA-KELGPKLMANRKPFELRNILVVY 651
           WP      CY YC  ++ G  L+ +++   L  +L  +
Sbjct: 63  WPETRQLKCYMYCLWEQFG--LVDDKRELSLNGMLTFF 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,065
Number of Sequences: 438
Number of extensions: 4535
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)