Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_L19
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0816 + 7502669-7503145                                           29   4.9  
05_01_0127 - 863755-865182                                             29   6.5  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    28   8.6  
05_04_0220 - 19167485-19169290                                         28   8.6  

>12_01_0816 + 7502669-7503145
          Length = 158

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 818 RXSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERR 687
           R SG  +R V    PAW ER   + ++ +V  E+A      ERR
Sbjct: 8   RSSGEGDRPVARWWPAWQEREKESLESSAVEGERATAEVGSERR 51


>05_01_0127 - 863755-865182
          Length = 475

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 792 PPFSPTAXPYPVTIVLSPPGKXNYXPWQXPW 884
           PP  P A  +P  +   P G  +Y P   PW
Sbjct: 153 PPCQPAAKAHPDPLAWLPRGTTSYLPSMTPW 183


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 351 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 506
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 300 NESAN---ARGEAVCVLGALPLPRSLTRCAR 383
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 519 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 659
           CWR  +        T  D Q    +    +KD    P + PSC L+F
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIF 329


>05_04_0220 - 19167485-19169290
          Length = 601

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = -2

Query: 854 FTGWTQDDSYRIRXSGRAERGVRAHSPAWSERPTPN*D----TYSVSYEKAPRFPKGERR 687
           FT W  DD+ + R  G     +      W  RP P  D    +YS   + APRF +G+ R
Sbjct: 175 FTFWALDDAGQRRCLGGDFFEIDLAGDEWKSRP-PVVDHGDGSYSFRLQVAPRFAEGDFR 233

Query: 686 TGI 678
             I
Sbjct: 234 LTI 236


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,564,607
Number of Sequences: 37544
Number of extensions: 525949
Number of successful extensions: 1610
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)