Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_L18
(914 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 73 6e-14
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 71 2e-13
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 66 5e-12
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 63 5e-11
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 58 2e-09
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 29 0.70
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 29 1.2
SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 28 1.6
SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr 1|||... 27 2.8
SPMIT.11 |cox2||cytochrome c oxidase 2|Schizosaccharomyces pombe... 27 3.7
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 27 3.7
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 3.7
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 4.9
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 27 4.9
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 26 6.5
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c... 26 6.5
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 72.9 bits (171), Expect = 6e-14
Identities = 49/146 (33%), Positives = 84/146 (57%)
Frame = +3
Query: 357 LRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTL 536
L+ LD+S N+L L LS L HL++L +DSN L +L + + +L L L+ NN ++ L
Sbjct: 670 LQYLDISYNQLEDLTG-LSSLIHLRELKVDSNHLWSL-DGIQHLDGLLKLSACNNRIKEL 727
Query: 537 PVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIELNL 716
NL+ L+++ NN+++ ++I LQ+L VL L +NK+T + +++ L +
Sbjct: 728 SFTNSNLHRLEELLLGNNEIEEI-EEISSLQNLMVLQLDNNKLTNLKASQPMIHLRILRI 786
Query: 717 SQNEISLIGEDLHQAPRLKILRLDEN 794
S N I + ++ Q P L+ L +D N
Sbjct: 787 SNNAIHQL--EVDQFPHLRTLYMDLN 810
Score = 43.6 bits (98), Expect = 4e-05
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Frame = +3
Query: 291 VLQIADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALP 470
+L+I++ + ++ +D F LR L + N+ + P D+ +LK L + + +A
Sbjct: 783 ILRISNNAIHQLEVDQFPH---LRTLYMDLNRFN-RPPDIRRLKRLVNFSFRTQDPEA-- 836
Query: 471 ESLINLKKLEVLNI--SNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQIL-GLQSLDV 641
+ + L++ N+ SNN TL C ++ + +N +L+ PK I + +L V
Sbjct: 837 SNFVIQPSLDIRNLYLSNNTFVTLD-CKHMFLGVRYLELANVQLKEVPKYIATSMPNLRV 895
Query: 642 LDLSHNKITEI 674
LDLSHN I++I
Sbjct: 896 LDLSHNYISDI 906
Score = 42.3 bits (95), Expect = 9e-05
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = +3
Query: 294 LQIADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSN---KLQA 464
L++A+ +LKE+P + + LR LDLS N +S + + L L+ + +L L N K++
Sbjct: 872 LELANVQLKEVPKYIATSMPNLRVLDLSHNYISDI-ESLKPLQMIHRLYLVGNRIKKMRN 930
Query: 465 LPESLINLKKLEVLNISNN 521
L + L NLK+L VL++ N
Sbjct: 931 LCDILANLKQLNVLDLRMN 949
Score = 31.1 bits (67), Expect = 0.23
Identities = 24/104 (23%), Positives = 47/104 (45%)
Frame = +3
Query: 420 KHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQ 599
K + QL++ L +L +E L + N + L C + +L V + L
Sbjct: 603 KRIIQLDISRRHLDSLIGLSELCPSIEELTLEGNEIAYLTGCPVTIRDLNAVENRLSSLT 662
Query: 600 AFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIELNLSQNEI 731
+F L +L LD+S+N++ ++ S +++ EL + N +
Sbjct: 663 SFSN----LLNLQYLDISYNQLEDLTGLSSLIHLRELKVDSNHL 702
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 70.9 bits (166), Expect = 2e-13
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Frame = +3
Query: 294 LQIADCKLKEIPIDVFS-LCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALP 470
L ++ L+E+P + + + L L N + + ++ K L+ LN+ SN L+ P
Sbjct: 32 LDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREFP 91
Query: 471 ESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDL 650
ESL L+ LE+L+IS N ++ LP L NLK + S N+L P I + +L++L +
Sbjct: 92 ESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFELPTYIAHMPNLEILKI 151
Query: 651 SHNKITEIP 677
+N I P
Sbjct: 152 ENNHIVFPP 160
Score = 57.6 bits (133), Expect = 2e-09
Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = +3
Query: 366 LDLSKNKLSVLP-DDLSKLK-HLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTLP 539
LDLS L LP + L +++ + +L L N ++++ ++ +L LNI +N ++ P
Sbjct: 32 LDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREFP 91
Query: 540 VCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIE-LNL 716
L L +L+ + S NK++ P+ L +L VL +S N++ E+P ++ + +E L +
Sbjct: 92 ESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFELPTYIAHMPNLEILKI 151
Query: 717 SQNEI 731
N I
Sbjct: 152 ENNHI 156
Score = 56.0 bits (129), Expect = 7e-09
Identities = 33/98 (33%), Positives = 54/98 (55%)
Frame = +3
Query: 357 LRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTL 536
LR L++ N L P+ L +L+ L+ L++ NK++ LPES L L+VL+IS N + L
Sbjct: 77 LRYLNIRSNVLREFPESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFEL 136
Query: 537 PVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDL 650
P + ++ NL+ + NN + FP + L D+
Sbjct: 137 PTYIAHMPNLEILKIENNHI-VFPPPHIANNDLQDSDM 173
Score = 33.5 bits (73), Expect = 0.043
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 621 GLQSLDVLDLSHNKITEIPYGMSELY---VIELNLSQNEISLIGEDLHQAPRLKILRLDE 791
G ++ LDLSH + E+PY E + L L N I IG ++ + RL+ L +
Sbjct: 25 GPENALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRS 84
Query: 792 NCL 800
N L
Sbjct: 85 NVL 87
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 66.5 bits (155), Expect = 5e-12
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 5/190 (2%)
Frame = +3
Query: 321 EIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSN---KLQALPESLINLK 491
++P+D C L+ LD+S N S ++ L+ L+ LN+ N +L L S ++
Sbjct: 443 DLPLDFMERCVKLKRLDISNNLRSPRGKPITALRQLEVLNMSRNDIYELDPLIFSGLSRN 502
Query: 492 KLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITE 671
L+ LNI+NN + LP + L NL + S N FP I L L+ L+ SHN +++
Sbjct: 503 SLKELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLSQ 562
Query: 672 IPYGMSELYVIE-LNLSQNEIS-LIGEDLHQAPRLKILRLDENCLSLDEIKPSCFEIQDT 845
I + L ++ L L N++S + +++ L+ + L N ++ C ++
Sbjct: 563 ISSKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNIASLSECPKL--N 620
Query: 846 TVSVXGNYLS 875
+++V N LS
Sbjct: 621 SINVACNLLS 630
Score = 62.5 bits (145), Expect = 8e-11
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 29/184 (15%)
Frame = +3
Query: 339 FSLCDVLRNLDLSKNKLSVLP-------------------------DDLSKLKHLKQLNL 443
FS + NLD+S++ L V+P D + + LK+L++
Sbjct: 401 FSEKKITANLDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDI 460
Query: 444 DSNKLQALPESLINLKKLEVLNISNNFVQTL-PVCLKNL--NNLKQVYASNNKLQAFPKQ 614
+N + + L++LEVLN+S N + L P+ L N+LK++ +NNKL P
Sbjct: 461 SNNLRSPRGKPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHS 520
Query: 615 ILGLQSLDVLDLSHNKITEIPYGMSELYVIE-LNLSQNEISLIGEDLHQAPRLKILRLDE 791
L +L LDLS+N P ++EL +E LN S N +S I + +LK L L
Sbjct: 521 TRYLVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLSQISSKIGSLVKLKHLYLQF 580
Query: 792 NCLS 803
N LS
Sbjct: 581 NDLS 584
Score = 51.2 bits (117), Expect = 2e-07
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Frame = +3
Query: 333 DVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNI 512
D S L+ L + ++S + +L KLKHL L+L +N ++ PE + + L+V+N+
Sbjct: 700 DAISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNL 759
Query: 513 SNNFVQ--TLPVC-----LKNLNNLKQVYA-SNNKLQAFPKQILGLQSLDVLDLSHNKIT 668
S+N ++ LPV + ++ LK + S N + + Q + +++ L L N++
Sbjct: 760 SSNILEKIKLPVATSKKLTRTISQLKIMRTLSGNPVSSLSSQEFVMPTVEELYLVDNRLG 819
Query: 669 EIPYGMSELY--VIELNLSQNEISLIGEDLHQ-APRLKILRLDENCLSLDEIKPSCFEIQ 839
+ E + + LNLS N ++ I Q LK L + N L+ I S ++
Sbjct: 820 NDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSIS-STAQVL 878
Query: 840 DTTVSVXGNYLS 875
T+ GN LS
Sbjct: 879 LETLYANGNRLS 890
Score = 46.4 bits (105), Expect = 6e-06
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +3
Query: 408 LSKLKHLKQLNLDSNKLQALPESLI-NLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYAS 584
L K LK LNL N L +P N L+ L +S N + L + L+ +YA+
Sbjct: 826 LEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLETLYAN 885
Query: 585 NNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSE 692
N+L +FPK +SL LD+S N + + +E
Sbjct: 886 GNRLSSFPKNEALSKSLRFLDISTNNLQNLAVEKAE 921
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/115 (20%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +3
Query: 546 LKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSEL-YVIELNLSQ 722
++ L N++ V + N + I +Q+L L ++ +++ + + +L +++ L+L
Sbjct: 679 IETLVNVETVKVNYNHFTSISDAISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHA 738
Query: 723 NEISLIGEDLHQAPRLKILRLDENCLSLDEIKPSCFEIQDTTVSVXGNYLSLNGS 887
N I + E++ Q LK++ L N L ++ + + T+S +L+G+
Sbjct: 739 NNIKIFPEEVWQVSSLKVVNLSSNILEKIKLPVATSKKLTRTISQLKIMRTLSGN 793
Score = 33.1 bits (72), Expect = 0.057
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = +3
Query: 366 LDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLIN-LKKLEVLNISNNFVQTLPV 542
+D S L+ + D +L ++ KL L +S+I L +E + ++ N ++
Sbjct: 642 IDFSFCPLTTI-DPAFSYSNLVYFDISHAKLIGLKDSVIETLVNVETVKVNYNHFTSISD 700
Query: 543 CLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIE-LNLS 719
+ + NLK + +N ++ + L+ L LDL N I P + ++ ++ +NLS
Sbjct: 701 AISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNLS 760
Query: 720 QNEISLI 740
N + I
Sbjct: 761 SNILEKI 767
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 63.3 bits (147), Expect = 5e-11
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Frame = +3
Query: 351 DVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQ 530
D L NL+L NK+ V+ ++L L +L++L + NK+ E+ L+KL +L+I +N +
Sbjct: 148 DRLTNLELGGNKIRVI-ENLDTLVNLEKLWVGKNKITKF-ENFEKLQKLSLLSIQSNRIT 205
Query: 531 TLP--VCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVI 704
CL + L+++Y S+N L +F I L++L++LD+S+N I + Y ++
Sbjct: 206 QFENLACLSHC--LRELYVSHNGLTSF-SGIEVLENLEILDVSNNMIKHLSYLAGLKNLV 262
Query: 705 ELNLSQNEISLIGEDLHQAPRLKIL 779
EL S NE+S E + LK L
Sbjct: 263 ELWASNNELSSFQEIEDELSGLKKL 287
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 58.0 bits (134), Expect = 2e-09
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Frame = +3
Query: 294 LQIADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPE 473
L+ + CKLK IP +VF L +LDLS N+L+ +P L +L L LNL SNK+
Sbjct: 337 LRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRT 396
Query: 474 SL-INLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFP--KQILGLQSLDVL 644
I+L L++L +S N + +L L+N+ +L+++ +N + ++++G + +
Sbjct: 397 FYHISLSHLQILVLSRNHLTSLS-GLENVPSLEKLDIRDNSITDVVEFRRLVGNTNFEEA 455
Query: 645 DLSHNKITE 671
LS N T+
Sbjct: 456 YLSLNPFTK 464
Score = 51.6 bits (118), Expect = 2e-07
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +3
Query: 558 NNLKQVYASNNKLQAFPKQI-LGLQSLDVLDLSHNKITEIPYGMSEL-YVIELNLSQNEI 731
+ L + S+ KL++ PK + L LQSL LDLS N++TEIPY + EL + LNL+ N+I
Sbjct: 332 SQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKI 391
Query: 732 SLIGEDLH-QAPRLKILRLDENCLS 803
+ H L+IL L N L+
Sbjct: 392 TGCRTFYHISLSHLQILVLSRNHLT 416
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 462 ALPESLINLKKLEVLNISNNFVQTLPV 542
AL ESL +LKK E LN+S LP+
Sbjct: 38 ALTESLKDLKKFETLNVSGKVPHVLPL 64
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 28.7 bits (61), Expect = 1.2
Identities = 37/140 (26%), Positives = 69/140 (49%)
Frame = +3
Query: 291 VLQIADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALP 470
V QI + +LKE+P+ +S+ ++ +L N L + + + + L KLQ
Sbjct: 288 VKQILEKELKELPVACYSIINLHDSLTQFPN-LDFILKTTALVLFIIFLVPSFKKLQN-E 345
Query: 471 ESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDL 650
ES+++L L +L+ + F T+P + N+ K A +++Q +L + +VL++
Sbjct: 346 ESILHL--LNILH--SIFEYTVPEAIDNIVQSKTSDARTSEIQHL--SVLLQKVANVLNI 399
Query: 651 SHNKITEIPYGMSELYVIEL 710
EIP +SE VI +
Sbjct: 400 LSKVAHEIP--LSEAVVIRI 417
>SPAC3F10.02c |trk1|sptrk|potassium ion transporter
Trk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 841
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = -2
Query: 562 LFKFFKQTGSVCTKLFDIFKTSSFFKFMSDSGKA*SLLLSKFNCFRCFNLLKSSGKTESL 383
LF TG C I+ T + F + +A + LL RCF LL SG T L
Sbjct: 545 LFIIAGNTGFPCFFRTFIWTTYKLYPFSFEKKEAMAFLLDHPR--RCFTLLFPSGATWVL 602
Query: 382 FF 377
FF
Sbjct: 603 FF 604
>SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr
1|||Manual
Length = 459
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 55 VSTYNLYLIYIPLKVYLLVLIRKDLSC*PTENTPELTEFFFFCLLP 192
+ T L LI I V + + +++ P N L EFF FCL+P
Sbjct: 20 IETCGLLLIGIACNVLWVNMTARNIL--PKGNLGFLVEFFIFCLIP 63
>SPMIT.11 |cox2||cytochrome c oxidase 2|Schizosaccharomyces
pombe|chr mitochondrial|||Manual
Length = 248
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 279 MQFHNVVLNQRSPSWTLMFQD 217
M F N +LN SW L FQD
Sbjct: 1 MLFFNSILNDAPSSWALYFQD 21
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 265 CCFKPAFPILDPYVSRFRSQ 206
C F FP++ P++ RFRS+
Sbjct: 555 CGFNIYFPLMSPWIQRFRSR 574
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 501 VLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPK 611
V SNN Q +P+ LK+ N+ +YAS N FP+
Sbjct: 101 VFGTSNNH-QIVPLTLKDGNDFGALYASLNTTPHFPQ 136
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 519 NFVQTLPVCLKNLNNLKQVYASNNKLQA 602
N ++ P+ LKN NNL + AS+N L +
Sbjct: 788 NALRQAPIGLKNTNNLSERNASSNLLNS 815
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 843 YLESRSNLV*FHPNSNSSHPIAISLILELGVSLLQSK 733
Y+++ S L N SHP+ +S L + L+QSK
Sbjct: 294 YMQTSSELTSSTEKMNGSHPLQLSNKSLLSIHLMQSK 330
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 636 LSSVIQVFVSEKPVIYYCLHKPVLNYLNSSNKLGV 532
L + + FVS ++ C PV+ Y+ N +G+
Sbjct: 289 LQNYVGFFVSVLDALFECFDVPVVQYMYQENIIGI 323
>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 585
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 591 YYCLHKPVLNYLNSSNKLGVFVQSCLIYLK 502
+ + KP L + + +N+LG+ V C I K
Sbjct: 346 FIAIVKPNLTFTDIANRLGISVSECFILAK 375
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,652,114
Number of Sequences: 5004
Number of extensions: 77745
Number of successful extensions: 251
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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