Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_L17
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 0.064
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 0.064
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 35 0.093
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.28
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 32 0.66
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 28 0.89
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 28 0.89
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.1
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 27 1.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.5
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 31 1.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.5
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 3.5
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 4.6
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 4.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 4.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 6.1
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 25 7.4
U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 8.1
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP P PP
Sbjct: 2 PPPPPPPPPPPPPPPP 17
Score = 27.9 bits (59), Expect(2) = 0.064
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXP 911
PPPPP PP P P
Sbjct: 10 PPPPPPPPAASAPPP 24
Score = 27.5 bits (58), Expect(2) = 0.18
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP PP
Sbjct: 9 PPPPPPPPPAASAPPP 24
Score = 26.6 bits (56), Expect(2) = 0.31
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP PP
Sbjct: 8 PPPPPPPPPPAASAPP 23
Score = 26.2 bits (55), Expect(2) = 0.064
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 741 PPPPPXKXXPPPXA 782
PPPPP PPP A
Sbjct: 5 PPPPPPPPPPPPPA 18
Score = 25.0 bits (52), Expect(2) = 0.18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 741 PPPPPXKXXPPP 776
PPPPP PPP
Sbjct: 2 PPPPPPPPPPPP 13
Score = 25.0 bits (52), Expect(2) = 0.31
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 741 PPPPPXKXXPPP 776
PPPPP PPP
Sbjct: 3 PPPPPPPPPPPP 14
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP P PP
Sbjct: 2 PPPPPPPPPPPPPPPP 17
Score = 27.9 bits (59), Expect(2) = 0.064
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXP 911
PPPPP PP P P
Sbjct: 10 PPPPPPPPAASAPPP 24
Score = 27.5 bits (58), Expect(2) = 0.18
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP PP
Sbjct: 9 PPPPPPPPPAASAPPP 24
Score = 26.6 bits (56), Expect(2) = 0.31
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP PP
Sbjct: 8 PPPPPPPPPPAASAPP 23
Score = 26.2 bits (55), Expect(2) = 0.064
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 741 PPPPPXKXXPPPXA 782
PPPPP PPP A
Sbjct: 5 PPPPPPPPPPPPPA 18
Score = 25.0 bits (52), Expect(2) = 0.18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 741 PPPPPXKXXPPP 776
PPPPP PPP
Sbjct: 2 PPPPPPPPPPPP 13
Score = 25.0 bits (52), Expect(2) = 0.31
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 741 PPPPPXKXXPPP 776
PPPPP PPP
Sbjct: 3 PPPPPPPPPPPP 14
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 34.7 bits (76), Expect = 0.093
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXGGXPXPP 914
PPP PPP A PPPPP PP G P PP
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXG---GXPXP 911
PPPPP PP PPPPP PP G G P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 912 P 914
P
Sbjct: 787 P 787
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 177 PGXXGGXXPPPGGGXRXKXAKXXXXXTPPPGGXAXPP 287
P GG PPP G + PPPGG PP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPP PP G P PP
Sbjct: 714 PPPPGLPPITGGPPPP 729
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXG---GXPXP 911
PPPPP PP PPPPP PP G G P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 912 P 914
P
Sbjct: 787 P 787
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 177 PGXXGGXXPPPGGGXRXKXAKXXXXXTPPPGGXAXPP 287
P GG PPP G + PPPGG PP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPP PP G P PP
Sbjct: 714 PPPPGLPPITGGPPPP 729
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXG---GXPXP 911
PPPPP PP PPPPP PP G G P P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 912 P 914
P
Sbjct: 370 P 370
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 177 PGXXGGXXPPPGGGXRXKXAKXXXXXTPPPGGXAXPP 287
P GG PPP G + PPPGG PP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPP PP G P PP
Sbjct: 297 PPPPGLPPITGGPPPP 312
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 5/63 (7%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPP-----PXPPXGGXP 905
PPPPP K PP PPPP P PP G P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 906 XPP 914
PP
Sbjct: 298 PPP 300
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXGGXP 905
PPPPP PPP PPPPP PP G P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP-PPRGSPP 308
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXGGXPXPP 914
PPPPP PP A PPP PP GG P PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 5/63 (7%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPP-----PXPPXGGXP 905
PPPPP K PP PPPP P PP G P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 906 XPP 914
PP
Sbjct: 319 PPP 321
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXGGXP 905
PPPPP PPP PPPPP PP G P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP-PPRGSPP 329
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXGGXPXPP 914
PPPPP PP A PPP PP GG P PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 5/63 (7%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPP-----PXPPXGGXP 905
PPPPP K PP PPPP P PP G P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 906 XPP 914
PP
Sbjct: 304 PPP 306
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXGGXP 905
PPPPP PPP PPPPP PP G P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP-PPRGSPP 314
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXGGXPXPP 914
PPPPP PP A PPP PP GG P PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPPPP 298
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 31.9 bits (69), Expect = 0.66
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 668 PPXDTXHXKKXXPPPPQK 721
PP DT H K+ PPPPQ+
Sbjct: 370 PPPDTPHKKRAAPPPPQE 387
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 28.3 bits (60), Expect(2) = 0.89
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP G P PP
Sbjct: 185 PPPPPIPPPG--PPPP 198
Score = 21.8 bits (44), Expect(2) = 0.89
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 741 PPPPPXKXXPPP 776
P PPP PPP
Sbjct: 182 PKPPPPPPIPPP 193
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 28.3 bits (60), Expect(2) = 0.89
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP G P PP
Sbjct: 185 PPPPPIPPPG--PPPP 198
Score = 21.8 bits (44), Expect(2) = 0.89
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 741 PPPPPXKXXPPP 776
P PPP PPP
Sbjct: 182 PKPPPPPPIPPP 193
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/17 (70%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +3
Query: 867 PPPPPXPPXG-GXPXPP 914
PPPPP PP G G P PP
Sbjct: 234 PPPPPLPPVGAGAPPPP 250
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/17 (70%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +3
Query: 867 PPPPPXPPXG-GXPXPP 914
PPPPP PP G G P PP
Sbjct: 220 PPPPPLPPVGAGAPPPP 236
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/17 (70%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +3
Query: 867 PPPPPXPPXG-GXPXPP 914
PPPPP PP G G P PP
Sbjct: 220 PPPPPLPPVGAGAPPPP 236
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 27.1 bits (57), Expect(2) = 1.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXP 911
PPPPP PP P P
Sbjct: 792 PPPPPPPPVATAPVP 806
Score = 22.2 bits (45), Expect(2) = 1.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 744 PPPPXKXXPPP 776
PPPP PPP
Sbjct: 784 PPPPRASEPPP 794
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 741 PPPPPXKXXPPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXPPXGGXPXPP 914
PPPPP PPP PPPPP PP P PP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPP--------PPPPPPPPMCPPPPPP 80
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 913 GGXGXPPXGGXGGGGGXXP 857
GG G P GG GGGGG P
Sbjct: 5 GGPGGPMYGGAGGGGGGPP 23
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
Frame = +3
Query: 867 PPPPPXPPXGG---XPXPP 914
PPPPP PP GG P PP
Sbjct: 39 PPPPPPPPCGGGYEAPPPP 57
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 869 PPPPXPPXGXGPXPP 913
PPPP PP G P PP
Sbjct: 297 PPPPPPPPGRTPGPP 311
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 869 PPPPXPPXGXGPXPP 913
PPPP PP G P PP
Sbjct: 307 PPPPPPPPGRTPGPP 321
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 870 PPPPXPPXGGXPXPP 914
PPPP PP GG PP
Sbjct: 331 PPPPPPPIGGLTSPP 345
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP P PP
Sbjct: 134 PPPPPSPPPPPPPPPP 149
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 913 GGXGXPPXGGXGGGGG 866
GG G PP G GGGGG
Sbjct: 622 GGGGGPPRGPGGGGGG 637
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 913 GGXGXPPXGGXGGGGG 866
GG G PP G GGGGG
Sbjct: 622 GGGGGPPRGPGGGGGG 637
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXP 911
PPP P PP GG P P
Sbjct: 1599 PPPGPPPPNGGPPPP 1613
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/17 (64%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
Frame = +3
Query: 867 PPPPPXPP-XGGXPXPP 914
PPPPP PP G P PP
Sbjct: 795 PPPPPLPPISSGAPPPP 811
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/17 (64%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
Frame = +3
Query: 867 PPPPPXPP-XGGXPXPP 914
PPPPP PP G P PP
Sbjct: 795 PPPPPLPPISSGAPPPP 811
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 25.0 bits (52), Expect(2) = 7.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP P P PP
Sbjct: 72 PPPPPPPMPCPPPPPP 87
Score = 21.8 bits (44), Expect(2) = 7.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 741 PPPPPXKXXPPP 776
PPP P + PPP
Sbjct: 57 PPPCPAQFCPPP 68
>U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical
protein ZK546.7 protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP G P PP
Sbjct: 150 PPPPPIPPPG--PPPP 163
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 867 PPPPPXPPXGGXPXPP 914
PPPPP PP P PP
Sbjct: 86 PPPPPPPPTLKAPPPP 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,082,382
Number of Sequences: 27780
Number of extensions: 247251
Number of successful extensions: 3248
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1988
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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