Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_L16
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93382-7|CAB07618.1| 214|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical ... 58 1e-08
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 58 1e-08
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 58 1e-08
Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z48230-1|CAA88262.2| 587|Caenorhabditis elegans Hypothetical pr... 29 6.0
U53339-5|AAA96201.1| 342|Caenorhabditis elegans Serpentine rece... 29 6.0
AC006747-5|AAF60510.3| 310|Caenorhabditis elegans Hypothetical ... 29 6.0
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z93382-7|CAB07618.1| 214|Caenorhabditis elegans Hypothetical
protein F45G2.9 protein.
Length = 214
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +2
Query: 443 EWLSRQKADPYVEKAKIYNYRCRSAFKLLEMNERTNILRPGLAVIDLGACPGSWTQVAVQ 622
+++ RQ D + KA+ +NYR RSAFKL+E+NE+ L+P VID+G PGSW QV VQ
Sbjct: 13 KYIQRQSTDEFAVKAREHNYRARSAFKLIEINEKFKFLKPESTVIDIGCAPGSWLQVVVQ 72
Query: 623 K 625
K
Sbjct: 73 K 73
>AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical
protein H06I04.3b protein.
Length = 716
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 449 LSRQKADPYVEKAKIYNYRCRSAFKLLEMNERTNILRPGLAVIDLGACPGSWTQVAVQ 622
+ +Q+ D Y + AK YR R+AFKL+++N+R L A +DL A PG W QVA Q
Sbjct: 7 IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQ 64
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 449 LSRQKADPYVEKAKIYNYRCRSAFKLLEMNERTNILRPGLAVIDLGACPGSWTQVAVQ 622
+ +Q+ D Y + AK YR R+AFKL+++N+R L A +DL A PG W QVA Q
Sbjct: 7 IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQ 64
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 449 LSRQKADPYVEKAKIYNYRCRSAFKLLEMNERTNILRPGLAVIDLGACPGSWTQVAVQ 622
+ +Q+ D Y + AK YR R+AFKL+++N+R L A +DL A PG W QVA Q
Sbjct: 7 IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQ 64
>Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical
protein R74.7 protein.
Length = 337
Score = 52.0 bits (119), Expect = 6e-07
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 452 SRQKADPYVEKAKIYNYRCRSAFKLLEMNERTNILRPGLAVIDLGACPGSWTQV 613
SR K D Y AK +R RSAFKL+++++ IL+ +DL A PGSW+QV
Sbjct: 5 SRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQV 58
>Z48230-1|CAA88262.2| 587|Caenorhabditis elegans Hypothetical
protein F42G10.1 protein.
Length = 587
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -3
Query: 277 AQAQSLLFSFKNSIQVSTKLDLQTSIINGTVPYYFRFYFVFCCEFTYIHYS 125
A A L F+++N I +S + + I Y +F +V C E ++HY+
Sbjct: 277 AAASGLSFNYQNEIHIS--VFTMFNPIADPKSVYDQFLYVLCHELQHVHYN 325
>U53339-5|AAA96201.1| 342|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 16 protein.
Length = 342
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -3
Query: 316 PN*YIFISRYFSDAQAQSLLFSFKNSIQVSTKLDLQT--SIINGTVPYYFRFYFVFCCEF 143
PN + ++ YF A S LF+ + + LD QT I VPY + CC F
Sbjct: 54 PNFKLLLTMYFFAAIFHSFLFTASYLMMIERFLDYQTDCDIHVSMVPYAIVHSSIACCLF 113
>AC006747-5|AAF60510.3| 310|Caenorhabditis elegans Hypothetical
protein Y39A3A.3 protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -1
Query: 204 QSSMVPYLIIFVSISFSVVNLHTYIIHHR*VIFDINH*FSFTYHFPFPL 58
+SS++ +LI SI+F +++ +II ++F + F F P P+
Sbjct: 8 ESSLIDFLIAVCSITFRQMSIQLFIIFFYFLVFPASTIFQFRQFPPAPV 56
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 849 ILSLSIPGHLLHWSHVRETRSTCGHLNFY 763
+L ++P H H HV++T+ G ++FY
Sbjct: 280 VLYPALPSHPQHTVHVKQTKGMSGMISFY 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,973,053
Number of Sequences: 27780
Number of extensions: 426572
Number of successful extensions: 985
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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