Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_L16
         (903 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    25   1.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   2.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.9  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   8.8  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 430 KSF*TIH*EAHSRVIQFDMRHFSMRTKHCDSV 335
           KS    H ++HS V Q+   + +  TK+C S+
Sbjct: 29  KSMLNSHLKSHSNVYQYRCANCTYATKYCHSL 60


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 651  LGSAPSAFVF*TATCVQEPGHAPRSITARPGLNILVL 541
            +GS+PS+ V    T  Q PG  P +    P    LVL
Sbjct: 1481 IGSSPSSPVLSVRTQGQAPGIPPAATFLSPNSTTLVL 1517



 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 896 FVTSXANLIAMYRDPLFYLYP 834
           FV     +++  ++P FY+YP
Sbjct: 157 FVKDLVRVVSWLQEPSFYIYP 177


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 651  LGSAPSAFVF*TATCVQEPGHAPRSITARPGLNILVL 541
            +GS+PS+ V    T  Q PG  P +    P    LVL
Sbjct: 1477 IGSSPSSPVLSVRTQGQAPGIPPAATFLSPNSTTLVL 1513



 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 896 FVTSXANLIAMYRDPLFYLYP 834
           FV     +++  ++P FY+YP
Sbjct: 157 FVKDLVRVVSWLQEPSFYIYP 177


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 56  CKGKGKWYV 82
           CKG GKWY+
Sbjct: 234 CKGDGKWYL 242


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 530  EMNERTNILRPGLAVIDLGACPGSWTQVAVQKTNADG 640
            E N+ +N ++PG   + L   P +W  + V   N  G
Sbjct: 1505 EWNQVSNNVKPGGNFVVLDLVPATWYHLRVTAHNNAG 1541


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 371 THIKLNYTRMCFLVNCLKRFK 433
           TH +L   R   L NCL++ K
Sbjct: 52  THNELEKNRRAHLRNCLEKLK 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,087
Number of Sequences: 438
Number of extensions: 5316
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)