Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_L15
(897 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 33 1.1
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 33 1.1
AF491813-1|AAM09558.1| 2113|Homo sapiens Down syndrome cell adhe... 33 1.9
AF334384-1|AAL57166.1| 2053|Homo sapiens Down syndrome cell adhe... 33 1.9
AF304305-1|AAN32614.1| 1842|Homo sapiens Down syndrome cell adhe... 33 1.9
AF304304-1|AAN32613.1| 2053|Homo sapiens Down syndrome cell adhe... 33 1.9
AB032958-1|BAA86446.2| 2092|Homo sapiens KIAA1132 protein protein. 33 1.9
AK126559-1|BAC86594.1| 308|Homo sapiens protein ( Homo sapiens ... 32 2.5
BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein. 32 3.2
BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein. 32 3.2
AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein. 32 3.2
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -1
Query: 753 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 574
ER G+ GS+Q S+ G++P + GFA+ + +F +A GG + +P +
Sbjct: 573 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 630
Query: 573 RPFYGSWP 550
P Y S P
Sbjct: 631 TPSYLSVP 638
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -1
Query: 753 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 574
ER G+ GS+Q S+ G++P + GFA+ + +F +A GG + +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631
Query: 573 RPFYGSWP 550
P Y S P
Sbjct: 632 TPSYLSVP 639
>AF491813-1|AAM09558.1| 2113|Homo sapiens Down syndrome cell adhesion
molecule 2 protein.
Length = 2113
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 674 PGVSPWKLPRALSCSDPAAYRIPVRLS-PFGKRGAFSXLTL*VSQSGVGRSLQAG 835
PG +P + P A S + PA P R P K G L +S SGVGRS + G
Sbjct: 2048 PGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQG 2102
>AF334384-1|AAL57166.1| 2053|Homo sapiens Down syndrome cell adhesion
molecule DSCAML1 protein.
Length = 2053
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 674 PGVSPWKLPRALSCSDPAAYRIPVRLS-PFGKRGAFSXLTL*VSQSGVGRSLQAG 835
PG +P + P A S + PA P R P K G L +S SGVGRS + G
Sbjct: 1988 PGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQG 2042
>AF304305-1|AAN32614.1| 1842|Homo sapiens Down syndrome cell adhesion
molecule like-protein 1b protein.
Length = 1842
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 674 PGVSPWKLPRALSCSDPAAYRIPVRLS-PFGKRGAFSXLTL*VSQSGVGRSLQAG 835
PG +P + P A S + PA P R P K G L +S SGVGRS + G
Sbjct: 1777 PGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQG 1831
>AF304304-1|AAN32613.1| 2053|Homo sapiens Down syndrome cell adhesion
molecule like-protein 1a protein.
Length = 2053
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 674 PGVSPWKLPRALSCSDPAAYRIPVRLS-PFGKRGAFSXLTL*VSQSGVGRSLQAG 835
PG +P + P A S + PA P R P K G L +S SGVGRS + G
Sbjct: 1988 PGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQG 2042
>AB032958-1|BAA86446.2| 2092|Homo sapiens KIAA1132 protein protein.
Length = 2092
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 674 PGVSPWKLPRALSCSDPAAYRIPVRLS-PFGKRGAFSXLTL*VSQSGVGRSLQAG 835
PG +P + P A S + PA P R P K G L +S SGVGRS + G
Sbjct: 2027 PGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQG 2081
>AK126559-1|BAC86594.1| 308|Homo sapiens protein ( Homo sapiens
cDNA FLJ44595 fis, clone BLADE2004849. ).
Length = 308
Score = 32.3 bits (70), Expect = 2.5
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 689 WKLPRALSCSDPAAYRIPVRL-SPFGKRGAFSXLTL*VSQSGVGRSLQAGLCAXTPRSXR 865
W LP + PA R P R SP G + L L Q+G G A L P+
Sbjct: 111 WLLPPTTTFGRPA--RQPARTRSPTGTPSSSPSLPLRPCQAGAGAGPHAYLQRRKPKPPP 168
Query: 866 PXXPYPVLSS 895
P P P+LSS
Sbjct: 169 PPPPPPLLSS 178
>BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein.
Length = 299
Score = 31.9 bits (69), Expect = 3.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 755 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 627
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein.
Length = 293
Score = 31.9 bits (69), Expect = 3.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 755 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 627
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein.
Length = 482
Score = 31.9 bits (69), Expect = 3.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 755 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 627
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,475,459
Number of Sequences: 237096
Number of extensions: 2519759
Number of successful extensions: 9817
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9816
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -