Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_L14
(942 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 4e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.10
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.13
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.31
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.31
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.54
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.54
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 25 0.63
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.72
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 1.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 3.8
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.1
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.3 bits (90), Expect = 4e-04
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = -2
Query: 578 PPPPPXXXXXXXXXXXXXPPPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPPPPXPPXX 399
PPPPP P PPP PP P PPPPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP---PPPPPGVAGAGPPPPPPPPPAVSAG 788
Query: 398 XXXXXXPXXGAPPPP 354
P A P P
Sbjct: 789 GSRYYAPAPQAEPEP 803
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -2
Query: 524 PPPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPPPPXPPXXXXXXXXPXXGAPPPPP 351
PPPPP P P P PPPPP PP P PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPA---PIMGGPPPPPPPPGVAGAGPPPP---PPPPP 783
Score = 30.3 bits (65), Expect = 0.41
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = -2
Query: 704 PPPPXXXXXPPPXXXXXPXPPXXXXXXXXXXXXXXXXXXXXXPPPPP 564
PPPP P P P PP PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/50 (26%), Positives = 13/50 (26%)
Frame = -1
Query: 714 PXXPPPPXXXXXXPPXXXXXPPPPXXXXXXXXXXXXXXXXXXXXXPPPPP 565
P PPP P PPP PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.3 bits (85), Expect = 0.002
Identities = 34/123 (27%), Positives = 34/123 (27%), Gaps = 6/123 (4%)
Frame = -2
Query: 701 PPPXXXXXPPPXXXXXPXPPXXXXXXXXXXXXXXXXXXXXXPP-PPPXXXXXXXXXXXXX 525
PPP PPP PP PP PPP
Sbjct: 253 PPPI----PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANK 308
Query: 524 ----PPPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPPPPXPPXXXXXXXXP-XXGAPP 360
PPPPP PP PPPPPPP P APP
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSL------PPPPPPPRSNAAGSIPLPPQGRSAPP 362
Query: 359 PPP 351
PPP
Sbjct: 363 PPP 365
Score = 34.7 bits (76), Expect = 0.019
Identities = 29/120 (24%), Positives = 29/120 (24%), Gaps = 2/120 (1%)
Frame = -2
Query: 704 PPPPXXXXXPPPXXXXXPXPPXXXXXXXXXXXXXXXXXXXXXPPPPPXXXXXXXXXXXXX 525
PPPP PPP P PPP
Sbjct: 337 PPPP-----PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 524 PPPPPXXXXXXXPPXXXXXXX--PXXXXXPXXPPPPPPPXPPXXXXXXXXPXXGAPPPPP 351
PP P PP P P PP PP PP APP PP
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 31.9 bits (69), Expect = 0.13
Identities = 34/167 (20%), Positives = 34/167 (20%), Gaps = 3/167 (1%)
Frame = -3
Query: 844 PPPXXXXXXXXXXXXGGXXXXXXPXXPPXXXXXXXXPXXXXXXPXXXPPPXXXXXXPPPX 665
PPP G P PP PPP P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 664 XXXXPXPXXXPXXXXXXXXXXXXXXXXXXPPPPPXXXXXXXXXXXXPPPP--PPXXXXXX 491
P P P PP P PP PP
Sbjct: 374 RQ--PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSL 431
Query: 490 XPXXXXXXXXPXXXXXPXPPXPP-PPPXPXXXXXXPXXXGXGPPPPP 353
P P PP P PP P P P PPP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 3/61 (4%)
Frame = -2
Query: 524 PPPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPP--PPXPPXXXXXXXXPXXG-APPPP 354
PP P PP P PP P PP P P APPP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 353 P 351
P
Sbjct: 480 P 480
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 428 PPPPPXPPXXXXXXXXPXXGAPPPPP 351
PP PP P P AP PPP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPP 255
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = -2
Query: 578 PPPPPXXXXXXXXXXXXXPPPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPPPPXP 408
P PP PP PP P P P PPP P P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA-PPPAPAPAP 484
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -2
Query: 488 PPXXXXXXXPXXXXXPXXPPPPPPPXPPXXXXXXXXPXXGAPPPP 354
PP P P PPPP PP APPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/38 (34%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Frame = -2
Query: 518 PPPXXXXXXXPPXXXXXXXPXXXXXPXXPP-PPPPPXP 408
PP PP P P PP PPPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 23.4 bits (48), Expect(2) = 3.5
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 574 PPPPXXXXXXXXXXXXPPPPPP 509
PPPP PPPP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
Score = 21.8 bits (44), Expect(2) = 3.5
Identities = 9/28 (32%), Positives = 9/28 (32%)
Frame = -3
Query: 715 PXXXPPPXXXXXXPPPXXXXXPXPXXXP 632
P PP PPP P P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = -2
Query: 578 PPPPPXXXXXXXXXXXXXPPPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPPPPXPP 405
PPPPP P P P PPPPPP PP
Sbjct: 191 PPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 26.2 bits (55), Expect = 6.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 434 PPPPPPPXP 408
PPPPPPP P
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect(2) = 0.13
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 431 PPPPPPXPP 405
PPPPPP PP
Sbjct: 189 PPPPPPPPP 197
Score = 24.2 bits (50), Expect(2) = 0.13
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -2
Query: 419 PPXPPXXXXXXXXPXXGAPPPPP 351
P PP P PPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPP 243
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -2
Query: 434 PP--PPPPPXPPXXXXXXXXPXXGAPPPPP 351
PP PPPPP PP P PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP----PPPPP 30
Score = 29.5 bits (63), Expect = 0.72
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 436 PPXPPPPPXPXXXXXXPXXXGXGPPPPP 353
PP PPPP P P PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPP---SQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 705 PPPPXXXXXXPPXXXXXPPPP 643
PPPP PP PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 577 PPPPPXXXXXXXXXXXXPPPPP 512
PPPPP PPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 574 PPPPXXXXXXXXXXXXPPPPPP 509
PPPP PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 714 PXXPPPPXXXXXXPPXXXXXPPPP 643
P PPPP P PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 461 PXXXXXPXXPPPPPPP 414
P P PPPPPPP
Sbjct: 15 PPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -2
Query: 488 PPXXXXXXXPXXXXXPXXPPPPPPP 414
PP P P PPPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.31
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = -2
Query: 578 PPPPPXXXXXXXXXXXXXPPPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPPPPXPPXX 399
P P P PP P P P PP PPP P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 398 XXXXXXPXXGAPPPPP 351
P G PP PP
Sbjct: 1201 PK----PSVGVPPVPP 1212
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/75 (25%), Positives = 19/75 (25%), Gaps = 1/75 (1%)
Frame = -2
Query: 575 PPPPXXXXXXXXXXXXXPPPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPPPPXP-PXX 399
PP P PP PP P P PPP P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 398 XXXXXXPXXGAPPPP 354
GAPP P
Sbjct: 1072 EIPSIPAPSGAPPVP 1086
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/75 (26%), Positives = 20/75 (26%), Gaps = 1/75 (1%)
Frame = -2
Query: 575 PPPPXXXXXXXXXXXXXPPPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPPPPXP-PXX 399
PP P PP PP P P PP PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK----PAAGVPPVPPPSEAPPVPKPSV 1205
Query: 398 XXXXXXPXXGAPPPP 354
P APP P
Sbjct: 1206 GVPPVPPPSTAPPVP 1220
Score = 25.8 bits (54), Expect = 8.8
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 4/61 (6%)
Frame = -2
Query: 524 PPPPPXXXXXXXPPXXXXXXXPXXXXX--PXXPP--PPPPPXPPXXXXXXXXPXXGAPPP 357
P P P PP P P PP PP P P P APP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPV 1239
Query: 356 P 354
P
Sbjct: 1240 P 1240
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.9 bits (64), Expect = 0.54
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = +3
Query: 351 WGGGGGPXPXXXGXXXXXXGXGGGGGXGGXGXXXXXGXXXXXXXXGXXXXXXXGGGGGGX 530
+GGG G P G G GG G G G G GG GGG
Sbjct: 193 FGGGSGGPPPGPGGFGGFGGFGGEGHHHG-GHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 531 XXXXXXXXXXXGGGGG 578
GG GG
Sbjct: 252 GGFGGGPGGFGGGPGG 267
Score = 26.6 bits (56), Expect = 5.1
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = +1
Query: 352 GGGGGAPXXGXXXXXXXXGGXGG-GGGGGXXGXXXXXGXXXXXXXGGXXXXXXXGGGGGX 528
GG GG P GG GG GG G G G GG GG G
Sbjct: 195 GGSGGPP-----PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG 249
Query: 529 XXXXXXXXXXXXGGGGG 579
GGG G
Sbjct: 250 GLGGFGGGPGGFGGGPG 266
Score = 25.8 bits (54), Expect = 8.8
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +1
Query: 406 GGXGGGGGGGXXGXXXXXGXXXXXXXGGXXXXXXXGGGGGXXXXXXXXXXXXXGGGGG 579
GG GGG GG G G G GG GG GG GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEG--HHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.9 bits (64), Expect = 0.54
Identities = 18/76 (23%), Positives = 18/76 (23%)
Frame = -2
Query: 578 PPPPPXXXXXXXXXXXXXPPPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPPPPXPPXX 399
PPPPP PPPP P P P P P P
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVA 967
Query: 398 XXXXXXPXXGAPPPPP 351
PP P
Sbjct: 968 AASRISSSPNMPPSNP 983
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 24.6 bits (51), Expect(2) = 0.63
Identities = 11/36 (30%), Positives = 11/36 (30%)
Frame = -2
Query: 521 PPPPXXXXXXXPPXXXXXXXPXXXXXPXXPPPPPPP 414
PP P P PPPPPPP
Sbjct: 341 PPAPFFPLGFSPHLNDESSRSRWSNISYSPPPPPPP 376
Score = 23.4 bits (48), Expect(2) = 0.63
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 428 PPPPPXPP 405
PPPPP PP
Sbjct: 370 PPPPPPPP 377
Score = 23.0 bits (47), Expect(2) = 8.2
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -3
Query: 427 PPPPPXPXXXXXXPXXXGXGPPP 359
PPPPP P P G P
Sbjct: 371 PPPPPPPELLNHSPKSRPLGDKP 393
Score = 21.0 bits (42), Expect(2) = 8.2
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3
Query: 526 PPPPPP 509
PPPPPP
Sbjct: 370 PPPPPP 375
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.72
Identities = 21/78 (26%), Positives = 21/78 (26%), Gaps = 5/78 (6%)
Frame = -3
Query: 574 PPPPXXXXXXXXXXXXPPPP--PPXXXXXXXPXXXXXXXXPXXXXXPXPPXPP---PPPX 410
P PP PP P PP P P P P P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 409 PXXXXXXPXXXGXGPPPP 356
P P PPPP
Sbjct: 188 PSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -2
Query: 443 PXXPPPPPPPXPPXXXXXXXXPXXGAPPPPP 351
P PPP P PP P PP P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.3 bits (60), Expect = 1.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2
Query: 443 PXXPPPPPPPXP 408
P PPPPPPP P
Sbjct: 942 PAFPPPPPPPPP 953
Score = 26.2 bits (55), Expect = 6.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 431 PPPPPPXPP 405
PPPPPP PP
Sbjct: 945 PPPPPPPPP 953
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -2
Query: 434 PPPPPPPXPPXXXXXXXXPXXGAPPPPP 351
PPPPPP P P PP P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGP 1909
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 GGGGGAPXXGXXXXXXXXGGXGG--GGGGGXXG 444
GG GGA G GG GG GG GG G
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 355 GGGGAPXXGXXXXXXXXGGXGGGGGGGXXGXXXXXGXXXXXXXGGXXXXXXXGGGGG 525
GG G G GG GGG GG G G GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 434 PPPPPPPXP 408
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect = 6.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 431 PPPPPPXPP 405
PPPPPP PP
Sbjct: 306 PPPPPPPPP 314
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 436 PPXPPPPP 413
PP PPPPP
Sbjct: 307 PPPPPPPP 314
Score = 21.0 bits (42), Expect(2) = 6.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3
Query: 526 PPPPPP 509
PPPPPP
Sbjct: 306 PPPPPP 311
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,778,288
Number of Sequences: 5004
Number of extensions: 35179
Number of successful extensions: 611
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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