Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_L12
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1332 + 32718584-32718706,32718892-32718960,32719069-327191...    95   5e-20
10_08_0523 - 18518158-18518442,18518786-18518899,18518994-185192...    93   3e-19
11_01_0669 - 5454116-5454153,5454569-5454770,5454865-5455029,545...    30   2.7  
06_01_0503 - 3596664-3596837,3597647-3598069,3598362-3598595,359...    30   2.7  

>04_04_1332 +
           32718584-32718706,32718892-32718960,32719069-32719155,
           32719865-32719971,32720066-32720187,32720462-32720535,
           32720833-32720946,32721100-32721213
          Length = 269

 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 43/93 (46%), Positives = 61/93 (65%)
 Frame = +2

Query: 248 LSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKFKTNLEHXYIQN 427
           + R ++L+W+N  LQ + AK+EE  +GA  CQ MDM+ PG VPM ++ F    E+  IQN
Sbjct: 19  VGRGEILSWINATLQLSLAKVEEAASGAVQCQLMDMVHPGVVPMHKVNFDAKTEYDMIQN 78

Query: 428 FKILQAGFKKMGVDKIVPIDXLVKGRFPDNLSF 526
           +KILQ  F K+ + K + ++ LVKGR  DNL F
Sbjct: 79  YKILQDVFNKLRLSKNIEVNKLVKGRPLDNLEF 111


>10_08_0523 -
           18518158-18518442,18518786-18518899,18518994-18519219,
           18519364-18519470,18519809-18519964,18520100-18520210
          Length = 332

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 40/93 (43%), Positives = 59/93 (63%)
 Frame = +2

Query: 248 LSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKFKTNLEHXYIQN 427
           + R+++LAW+N  LQ   +K+EE  +GA  CQ MD   PG+VPM ++ F    E+  IQN
Sbjct: 15  VGRNEILAWINTTLQLGLSKVEEAASGAVACQLMDAAHPGAVPMHKVNFDAKTEYEMIQN 74

Query: 428 FKILQAGFKKMGVDKIVPIDXLVKGRFPDNLSF 526
           +K+LQ  F K+ + K + ++ L KGR  DNL F
Sbjct: 75  YKVLQDVFNKLKITKHIEVNKLTKGRPLDNLEF 107


>11_01_0669 -
           5454116-5454153,5454569-5454770,5454865-5455029,
           5455278-5456183
          Length = 436

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +2

Query: 293 SNFAKIEEL-CTGAAY---CQFMDMLFPGSVPMKRIKFKTNLEHXYIQNFKILQAGF 451
           SN  KI E+ C G      C+F+  L    +P+++I  K   EH   + F  +  GF
Sbjct: 377 SNHLKIVEIKCKGKEVMWVCKFLKTLGTFGIPLEKINIKLTSEHCRSECFNFVCTGF 433


>06_01_0503 -
           3596664-3596837,3597647-3598069,3598362-3598595,
           3598720-3598993,3599390-3599523,3599572-3599634,
           3599759-3599846,3599919-3599989,3600898-3601010,
           3601836-3602004,3602580-3602671,3602819-3603295,
           3603736-3604090
          Length = 888

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 365 QGTACP*TGNRRHLYTTLRSXQSLTGDNHSPTLAYHAAIDF 243
           QGT+C      RH  T LR+    TG +   +L  H A+D+
Sbjct: 733 QGTSCRGVNWDRHSLTDLRAAVVCTGGHRLASLLRHLALDY 773


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,551,744
Number of Sequences: 37544
Number of extensions: 361538
Number of successful extensions: 667
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)