Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_L12
         (863 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...   137   1e-32
AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical ...   102   3e-22
AF039710-3|AAD32272.1|  347|Caenorhabditis elegans Serpentine re...    30   2.4  
AF045641-4|AAO91715.1|  332|Caenorhabditis elegans Hypothetical ...    28   7.5  
AF045641-3|AAO91716.1|  368|Caenorhabditis elegans Hypothetical ...    28   7.5  
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ...    28   7.5  
AF039710-4|AAD32273.1|  347|Caenorhabditis elegans Serpentine re...    28   7.5  

>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score =  137 bits (331), Expect = 1e-32
 Identities = 55/105 (52%), Positives = 82/105 (78%)
 Frame = +2

Query: 212 VNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIK 391
           VNVY+T  +++NLSRH+ML WVNDCLQ++F KIE+L TGA YC F D LFP S+ +K++K
Sbjct: 6   VNVYTTASSADNLSRHEMLMWVNDCLQAHFTKIEQLHTGAGYCLFTDFLFPDSIQLKKVK 65

Query: 392 FKTNLEHXYIQNFKILQAGFKKMGVDKIVPIDXLVKGRFPDNLSF 526
           + + LE  ++ N+K++Q  +K +GV+K++P+D L+KG+F DN  F
Sbjct: 66  WNSRLELDWLSNWKLVQTTWKNLGVEKVIPVDKLIKGKFQDNFEF 110


>AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical
           protein VW02B12L.3 protein.
          Length = 299

 Score =  102 bits (245), Expect = 3e-22
 Identities = 44/107 (41%), Positives = 73/107 (68%)
 Frame = +2

Query: 206 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 385
           M VNV+ + VT++ LSR + +AWVN+ L+S+F K+EE+ +GAAYCQ   +LF  ++ +K+
Sbjct: 1   MVVNVFISAVTTDTLSRKEAVAWVNNLLKSHFTKVEEMASGAAYCQLTHLLF-NAINLKK 59

Query: 386 IKFKTNLEHXYIQNFKILQAGFKKMGVDKIVPIDXLVKGRFPDNLSF 526
           +KF    E   + N+K+L   +K +G+DK V ++ + K +F DN+ F
Sbjct: 60  VKFNPRSEPDVLNNWKVLTTTWKDLGIDKPVDVEKMKKAKFQDNMEF 106


>AF039710-3|AAD32272.1|  347|Caenorhabditis elegans Serpentine
           receptor, class h protein100 protein.
          Length = 347

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 21/79 (26%), Positives = 33/79 (41%)
 Frame = +2

Query: 215 NVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKF 394
           N YSTN +  NLS   + +W      ++F +I  L        F  +L    V MK +K+
Sbjct: 7   NYYSTNYSKCNLSESFLASWKGVAYPTDFIQIFSL--PLQILAFYIILTKTPVQMKSMKW 64

Query: 395 KTNLEHXYIQNFKILQAGF 451
                H +   F ++   F
Sbjct: 65  PLFYNHLFCSIFDVILCTF 83


>AF045641-4|AAO91715.1|  332|Caenorhabditis elegans Hypothetical
           protein F53H1.4b protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +2

Query: 206 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 385
           +A+ VYS  V + NLS  D+L  + D +   F   E+L +       +     G + +  
Sbjct: 17  LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 75

Query: 386 IKFKTNLEHXYIQNFKILQA-GFKKMGVDKIVPID 487
           ++  T + H  ++  K L     KK+ ++    +D
Sbjct: 76  MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVD 110


>AF045641-3|AAO91716.1|  368|Caenorhabditis elegans Hypothetical
           protein F53H1.4c protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +2

Query: 206 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 385
           +A+ VYS  V + NLS  D+L  + D +   F   E+L +       +     G + +  
Sbjct: 53  LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 111

Query: 386 IKFKTNLEHXYIQNFKILQA-GFKKMGVDKIVPID 487
           ++  T + H  ++  K L     KK+ ++    +D
Sbjct: 112 MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVD 146


>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
           protein F53H1.4a protein.
          Length = 1370

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +2

Query: 206 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 385
           +A+ VYS  V + NLS  D+L  + D +   F   E+L +       +     G + +  
Sbjct: 53  LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 111

Query: 386 IKFKTNLEHXYIQNFKILQA-GFKKMGVDKIVPID 487
           ++  T + H  ++  K L     KK+ ++    +D
Sbjct: 112 MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVD 146


>AF039710-4|AAD32273.1|  347|Caenorhabditis elegans Serpentine
           receptor, class h protein99 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 20/79 (25%), Positives = 32/79 (40%)
 Frame = +2

Query: 215 NVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKF 394
           N YSTN +  NLS   + +W      ++  +I  L        F  +L    V MK +K+
Sbjct: 7   NYYSTNYSKCNLSESFLASWKGVAYPTDIIQIFSL--PLQILAFFIILAKSPVQMKSMKW 64

Query: 395 KTNLEHXYIQNFKILQAGF 451
                H +   F ++   F
Sbjct: 65  PLFYNHLFCSIFDLILCTF 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,808,659
Number of Sequences: 27780
Number of extensions: 327435
Number of successful extensions: 708
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)