Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_L11
         (894 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy...    29   8.6  
AY051501-1|AAK92925.1|  839|Drosophila melanogaster GH15453p pro...    29   8.6  
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,...    29   8.6  

>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dynein
            heavy chian protein.
          Length = 4639

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 347  YFLSKLLFIIVYKVKRYIPTEWVRRTSFNE 436
            YFL      IV +  RY+P  W ++  FNE
Sbjct: 4164 YFLLAWFHAIVQERLRYVPLGWAKKYEFNE 4193


>AY051501-1|AAK92925.1|  839|Drosophila melanogaster GH15453p
           protein.
          Length = 839

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 347 YFLSKLLFIIVYKVKRYIPTEWVRRTSFNE 436
           YFL      IV +  RY+P  W ++  FNE
Sbjct: 364 YFLLAWFHAIVQERLRYVPLGWAKKYEFNE 393


>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
            isoform A protein.
          Length = 4639

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 347  YFLSKLLFIIVYKVKRYIPTEWVRRTSFNE 436
            YFL      IV +  RY+P  W ++  FNE
Sbjct: 4164 YFLLAWFHAIVQERLRYVPLGWAKKYEFNE 4193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,500,215
Number of Sequences: 53049
Number of extensions: 507090
Number of successful extensions: 1414
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)