Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_L10
         (905 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    26   1.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.6  

>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -2

Query: 424 CGRVYAKAYDASNESLRFLW*TLDSCRSPILKSNKASTAFVPVKY 290
           C R Y    DA+ E++  +      C   +   NKA  A+ PV +
Sbjct: 57  CKRKYKCCNDANTENMEKIHEIKKQCFMEVRNKNKADGAYEPVDF 101


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = -3

Query: 861 PNPXKXGPPGGXGXPXXFXGEXPPPQXXREKXPYPK 754
           P P    PPG  G P    G    PQ  R    YP+
Sbjct: 187 PGPQMMRPPGNVGPPR--TGTPTQPQPPRPGGMYPQ 220


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 220  YSSLV--GFSDSGGSPKSSLRFLVFLLSAIVC 131
            Y +LV  G+ DS G P  SL  ++ L   +VC
Sbjct: 2167 YDALVSAGYLDSQGRPLKSLYLMLELRLPLVC 2198


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 220  YSSLV--GFSDSGGSPKSSLRFLVFLLSAIVC 131
            Y +LV  G+ DS G P  SL  ++ L   +VC
Sbjct: 2168 YDALVSAGYLDSQGRPLKSLYLMLELRLPLVC 2199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,646
Number of Sequences: 2352
Number of extensions: 14023
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)