Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_L10
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 50 3e-06
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 31 1.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 3.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 6.0
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 6.0
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z77655-7|CAB01133.2| 221|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical
protein C18E9.2a protein.
Length = 364
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 225 VAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALFDFKMGDRQESSVHHKNRSD 383
+AK+++ N PT T F + V YF+G KAVD L++ K G++ + K R D
Sbjct: 24 IAKYIRFNCPTATTMFEGNEVHYFSGNKAVDTLWESKYGNKAKKDAMFKTRDD 76
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = -3
Query: 855 PXKXGPPGGXGXPXXFXGEXPPPQXXREKXPYPKXGRPRGEXPKXGWFQXG 703
P + GPPG G P GE PP K P G P + P Q G
Sbjct: 212 PGEPGPPGAHGDPGDL-GEEGPPGLPGPKGPPGASGIPGNDGPPGARGQPG 261
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = -2
Query: 859 QPQXXXXPGGXGXPFXFXXGXPPPPXXQGKXPLSXKXPAKGGXXKXGLVPXGTKIPQ 689
Q Q PGG P+ + G PP Q + P PA+G G K P+
Sbjct: 797 QQQQQGAPGGPRPPYPYPGGPVPPGPPQNRMP--PPPPAQGAPSPSGAAGSNGKQPR 851
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 861 PNPXKXGPPGGXGXPXXFXGEXPPPQXXREKXPYPKXGRPRGEXPK 724
P P GPPG P + G PP+ P PK P + PK
Sbjct: 141 PRPHFPGPPGPHRPPEHYPG---PPRPQAPAAPPPKSLFPSAQKPK 183
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -3
Query: 843 GPPGGXGXPXXFXGEXPPPQXXREKXPYPKXGRPRGEXPKXG 718
GPPGG G P G PP + P P G G P G
Sbjct: 166 GPPGGMGGPPGHGGMGGPPGHGGQGGP-PGHGGMGGPPPGQG 206
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -3
Query: 843 GPPGGXGXPXXFXGEXPPPQXXREKXPYPKXGRPRGEXPKXG 718
GPPGG G P G PP + P P G G P G
Sbjct: 446 GPPGGMGGPPGHGGMGGPPGHGGQGGP-PGHGGMGGPPPGQG 486
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 791 GGXSPXKXKGXPXPPGGPXXLG 856
GG P KG P PPGGP LG
Sbjct: 148 GGPGP---KGPPGPPGGPGELG 166
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 791 GGXSPXKXKGXPXPPGGPXXLG 856
GG P KG P PPGGP LG
Sbjct: 148 GGPGP---KGPPGPPGGPGELG 166
>Z77655-7|CAB01133.2| 221|Caenorhabditis elegans Hypothetical
protein C56A3.4 protein.
Length = 221
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 304 VPVKYSTW*FRNFVFFVGTFALSHFATAYSSLVGFSDSGGSPKSSLRFLVFLLSAIV 134
+PV+ + W F NF F AT +L + +P+ S F+ ++L +V
Sbjct: 36 IPVRITNWFFTNFPVFSSLSLFLFIATVLITLYVYRRLSSTPRES--FISYILYTVV 90
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 895 PPRXXXGXXXGSQPQXXXXPGGXGXPFXFXXGXPPP 788
PP GS P PGG G P F G P P
Sbjct: 286 PPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGP 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,783,036
Number of Sequences: 27780
Number of extensions: 349933
Number of successful extensions: 1267
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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