Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_L09
(894 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-778|AAX52730.2| 660|Drosophila melanogaster CG33545-PA... 30 4.9
AE014297-4641|AAN14249.1| 659|Drosophila melanogaster CG31019-P... 29 6.5
U31961-5|AAA84404.1| 424|Drosophila melanogaster protein ( Dros... 29 8.6
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 29 8.6
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 29 8.6
AY058599-1|AAL13828.1| 773|Drosophila melanogaster LD29226p pro... 29 8.6
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 29 8.6
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 29 8.6
AE014297-2268|AAF55361.3| 417|Drosophila melanogaster CG10349-P... 29 8.6
AE013599-3146|AAF46686.2| 1215|Drosophila melanogaster CG4266-PA... 29 8.6
>AE014296-778|AAX52730.2| 660|Drosophila melanogaster CG33545-PA
protein.
Length = 660
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 614 RYQAFXP-GSSLVRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 757
++ +F P GSS + SPVP PL SA +P+ +V L+ C SV
Sbjct: 257 KFPSFNPSGSSFMPSPVPPAPLPA--SASVPAPTVPLATQISCPSAPSV 303
>AE014297-4641|AAN14249.1| 659|Drosophila melanogaster CG31019-PA
protein.
Length = 659
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 688 QVSGKRQGRNRRAHEGASRGK 626
+V KR+GRNR AH SR K
Sbjct: 491 EVRSKRRGRNRHAHHSRSRSK 511
>U31961-5|AAA84404.1| 424|Drosophila melanogaster protein (
Drosophila melanogasterbithorax complex (BX-C), complete
sequence. ).
Length = 424
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 305 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 400
ES +VC G LP+P L C + GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 8.6
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -3
Query: 856 LPGGLKTIVTG*GAAVGLNGGFVHTAQLGANDXHRTEIPTA*AMRKRHASRREKGGQVSG 677
L GGLK +G G V +GG V +A L AN P++ M R + G++SG
Sbjct: 1096 LNGGLKAASSGSGVGVVTSGGVVSSAVL-ANAPRVYLTPSSTFMTNRQMAGVASTGRMSG 1154
Query: 676 KRQG 665
+ G
Sbjct: 1155 QVVG 1158
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 29.1 bits (62), Expect = 8.6
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -3
Query: 856 LPGGLKTIVTG*GAAVGLNGGFVHTAQLGANDXHRTEIPTA*AMRKRHASRREKGGQVSG 677
L GGLK +G G V +GG V +A L AN P++ M R + G++SG
Sbjct: 13 LNGGLKAASSGSGVGVVTSGGVVSSAVL-ANAPRVYLTPSSTFMTNRQMAGVASTGRMSG 71
Query: 676 KRQG 665
+ G
Sbjct: 72 QVVG 75
>AY058599-1|AAL13828.1| 773|Drosophila melanogaster LD29226p
protein.
Length = 773
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = -3
Query: 850 GGLKTIVTG*GAAVGLNGGFVHTAQLGANDXHRTEIPTA*AMRKRHASRREKGGQVSGKR 671
GG++ + G G G G + G N+ R P + R E+GG++ R
Sbjct: 497 GGVRGVGGGGGGGPGGRGRWSDDEDEGGNNFKRRGGPGGPGGNR---FRGERGGEMMDDR 553
Query: 670 QGRNRRAHEGASRGKR 623
+G N R G R R
Sbjct: 554 RGNNSRGGRGGPREDR 569
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 29.1 bits (62), Expect = 8.6
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -3
Query: 856 LPGGLKTIVTG*GAAVGLNGGFVHTAQLGANDXHRTEIPTA*AMRKRHASRREKGGQVSG 677
L GGLK +G G V +GG V +A L AN P++ M R + G++SG
Sbjct: 13 LNGGLKAASSGSGVGVVTSGGVVSSAVL-ANAPRVYLTPSSTFMTNRQMAGVASTGRMSG 71
Query: 676 KRQG 665
+ G
Sbjct: 72 QVVG 75
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 29.1 bits (62), Expect = 8.6
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -3
Query: 856 LPGGLKTIVTG*GAAVGLNGGFVHTAQLGANDXHRTEIPTA*AMRKRHASRREKGGQVSG 677
L GGLK +G G V +GG V +A L AN P++ M R + G++SG
Sbjct: 13 LNGGLKAASSGSGVGVVTSGGVVSSAVL-ANAPRVYLTPSSTFMTNRQMAGVASTGRMSG 71
Query: 676 KRQG 665
+ G
Sbjct: 72 QVVG 75
>AE014297-2268|AAF55361.3| 417|Drosophila melanogaster CG10349-PA
protein.
Length = 417
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 305 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 400
ES +VC G LP+P L C + GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364
>AE013599-3146|AAF46686.2| 1215|Drosophila melanogaster CG4266-PA
protein.
Length = 1215
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = -3
Query: 850 GGLKTIVTG*GAAVGLNGGFVHTAQLGANDXHRTEIPTA*AMRKRHASRREKGGQVSGKR 671
GG++ + G G G G + G N+ R P + R E+GG++ R
Sbjct: 939 GGVRGVGGGGGGGPGGRGRWSDDEDEGGNNFKRRGGPGGPGGNR---FRGERGGEMMDDR 995
Query: 670 QGRNRRAHEGASRGKR 623
+G N R G R R
Sbjct: 996 RGNNSRGGRGGPREDR 1011
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,404,552
Number of Sequences: 53049
Number of extensions: 757167
Number of successful extensions: 1966
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1966
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -