Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_L06
         (1000 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078     31   1.9  
11_07_0007 - 27262229-27262638,27263252-27263312                       29   5.8  
09_02_0274 + 6611555-6611615,6612229-6612638                           29   5.8  

>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
          Length = 1034

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 727 KGRKGGXGIPVSGRGREQESAGGSXQGENAW 635
           +G + G G    G GR  ES GG  +G N W
Sbjct: 98  RGYESGGGRGPGGGGRGHESGGGGGRGGNVW 128


>11_07_0007 - 27262229-27262638,27263252-27263312
          Length = 156

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 22/64 (34%), Positives = 26/64 (40%)
 Frame = -1

Query: 838 GQTGGXXXHXPSLGRTDXHRTGDTYXGEL*ESPXASXKGRKGGXGIPVSGRGREQESAGG 659
           GQ+GG     P  G       G +  G        S +G  GG G  +SGRG     AGG
Sbjct: 73  GQSGGIGA--PGGGCGGAGHGGGSAGGGRGGGAGGSHRGGGGGRGGGLSGRGHGSGGAGG 130

Query: 658 SXQG 647
           S  G
Sbjct: 131 SSGG 134


>09_02_0274 + 6611555-6611615,6612229-6612638
          Length = 156

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 22/64 (34%), Positives = 26/64 (40%)
 Frame = -1

Query: 838 GQTGGXXXHXPSLGRTDXHRTGDTYXGEL*ESPXASXKGRKGGXGIPVSGRGREQESAGG 659
           GQ+GG     P  G       G +  G        S +G  GG G  +SGRG     AGG
Sbjct: 73  GQSGGIGA--PGGGCGGAGHGGGSAGGGRGGGAGGSHRGGGGGRGGGLSGRGHGSGGAGG 130

Query: 658 SXQG 647
           S  G
Sbjct: 131 SSGG 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,127,246
Number of Sequences: 37544
Number of extensions: 408643
Number of successful extensions: 1056
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2928685000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)