Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_L02
(888 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 283 3e-75
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 253 4e-66
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 251 2e-65
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 244 2e-63
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 241 2e-62
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 214 3e-54
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 213 5e-54
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 208 1e-52
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 204 2e-51
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 203 4e-51
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 202 9e-51
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 194 3e-48
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 192 1e-47
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 190 3e-47
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 186 9e-46
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 180 4e-44
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 175 1e-42
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 173 5e-42
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 167 3e-40
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 166 6e-40
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 166 8e-40
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 164 2e-39
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 164 2e-39
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 164 3e-39
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 163 7e-39
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 156 8e-37
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 154 2e-36
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 152 1e-35
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 152 1e-35
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 151 2e-35
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc... 150 4e-35
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 146 9e-34
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 145 1e-33
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 144 4e-33
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 138 1e-31
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 138 1e-31
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 134 2e-30
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 132 2e-29
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 131 2e-29
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 130 5e-29
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 130 5e-29
UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep: Cytoch... 125 2e-27
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 125 2e-27
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 123 5e-27
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 118 2e-25
UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:... 118 2e-25
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 116 1e-24
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 115 2e-24
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 108 2e-22
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 108 2e-22
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 106 7e-22
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 105 1e-21
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 100 4e-20
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|... 100 4e-20
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis... 100 6e-20
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 99 1e-19
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 97 4e-19
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep... 93 9e-18
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 93 9e-18
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 93 9e-18
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 90 6e-17
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 81 3e-14
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula... 79 2e-13
UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum lineare|... 79 2e-13
UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep: ... 78 3e-13
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 77 5e-13
UniRef50_O21345 Cluster: Apocytochrome b; n=1; Euhadra herklotsi... 75 2e-12
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 75 3e-12
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 74 6e-12
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 73 1e-11
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 72 2e-11
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ... 70 7e-11
UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole ge... 69 1e-10
UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep... 65 2e-09
UniRef50_Q76CU5 Cluster: Cytochrome b; n=1; Galaxea fascicularis... 65 3e-09
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 61 3e-08
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 61 4e-08
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 61 4e-08
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene... 53 1e-05
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:... 51 3e-05
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 51 5e-05
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 48 2e-04
UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Re... 48 2e-04
UniRef50_Q9L597 Cluster: Subunit IV; n=2; Heliobacteriaceae|Rep:... 48 4e-04
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo... 47 6e-04
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ... 47 6e-04
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re... 47 6e-04
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu... 47 6e-04
UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;... 46 0.001
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 46 0.001
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica... 46 0.002
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:... 46 0.002
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor... 45 0.003
UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 44 0.004
UniRef50_Q18UP2 Cluster: Putative uncharacterized protein; n=2; ... 44 0.005
UniRef50_P56774 Cluster: Cytochrome b6-f complex subunit 4; n=24... 44 0.007
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 43 0.009
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 43 0.009
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 43 0.012
UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon domesti... 43 0.012
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 42 0.016
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 42 0.016
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ... 42 0.028
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli... 41 0.048
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 40 0.064
UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 39 0.15
UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Re... 39 0.20
UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula ... 38 0.45
UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 38 0.45
UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4... 37 0.79
UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1; Ples... 37 0.79
UniRef50_Q7YIG0 Cluster: Cytochrome b; n=2; Otiorhynchus scaber|... 36 1.0
UniRef50_Q91096 Cluster: Cytochrome b; n=2; Malaconotidae|Rep: C... 36 1.8
UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter violace... 36 1.8
UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus rugul... 34 4.2
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc... 34 4.2
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla... 34 5.6
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 33 7.4
UniRef50_Q703H8 Cluster: Cytochrome b; n=2; Halobacteriaceae|Rep... 33 7.4
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 283 bits (695), Expect = 3e-75
Identities = 142/241 (58%), Positives = 159/241 (65%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
++ +T I +AFY VN+ICR+VNYG ++RTLHANGASFFFICIYLH+GRGIYY S+
Sbjct: 53 AMHYTADI-NLAFYSVNHICRDVNYGWLLRTLHANGASFFFICIYLHVGRGIYYGSYKFT 111
Query: 216 YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAV 395
L YVLP GQ+SFW ATVITNLL AIPYLG LV + GGFAV
Sbjct: 112 PTWLIGVIILFLVMGTAFMGYVLPWGQMSFWVATVITNLLYAIPYLGMDLVQWLWGGFAV 171
Query: 396 DNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXX 575
DNATLTRF+T QTGSNNP+GLN N+DKIPFHP+FTFKD
Sbjct: 172 DNATLTRFFTFHFILPFIVLAMTMIHLLFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDIV 231
Query: 576 XXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGG 755
+P LLGDPDNF PA PLVTP HIQPE YFLFAYAILRSIPNKLGG
Sbjct: 232 GFIVMIFILISLVLISPNLLGDPDNFIPATPLVTPAHIQPEWYFLFAYAILRSIPNKLGG 291
Query: 756 V 758
V
Sbjct: 292 V 292
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 253 bits (620), Expect = 4e-66
Identities = 127/230 (55%), Positives = 145/230 (63%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXX 248
AF V +ICR+VNYG IIR +HANGAS FFIC+++HIGRG+YY S+
Sbjct: 62 AFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHIGRGLYYGSYTFLETWNIGVLLLF 121
Query: 249 XXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTX 428
YVLP GQ+SFWGATVITNLLSAIPY+GT LV I GGF+VD ATLTRF+
Sbjct: 122 TTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAF 181
Query: 429 XXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXX 608
+TGSNNP G+ N DKIPFHP++T KD
Sbjct: 182 HFILPFIIMALAMVHLLFLHETGSNNPTGIPSNTDKIPFHPYYTIKDILGATLLILALML 241
Query: 609 XXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
P LLGDPDN+TPANPL TP HI+PE YFLFAYAILRSIPNKLGGV
Sbjct: 242 LVLFMPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGV 291
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 251 bits (614), Expect = 2e-65
Identities = 126/230 (54%), Positives = 146/230 (63%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXX 248
AF V +ICR+VNYG +IR LHANGAS FFIC++LH+GRG+YY S+
Sbjct: 62 AFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFMETWNIGVLLLF 121
Query: 249 XXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTX 428
YVLP GQ+SFWGATVITNLLSAIPY+G+ LV I GGF+VD ATLTRF+
Sbjct: 122 AVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFAF 181
Query: 429 XXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXX 608
+TGSNNP GL + DKIPFHP++T KD
Sbjct: 182 HFILPFVIAALAGVHLLFLHETGSNNPSGLPSDADKIPFHPYYTIKDILGILLLILVLTC 241
Query: 609 XXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
+P LLGDPDN+TPANPL TP HI+PE YFLFAYAILRSIPNKLGGV
Sbjct: 242 LVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGV 291
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 244 bits (598), Expect = 2e-63
Identities = 122/241 (50%), Positives = 151/241 (62%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
++ F+ I +AF +++I R+VN G +IR HAN ASFFFI +Y+HI RG+Y+ SF LK
Sbjct: 49 AMHFSSDI-SLAFSSISHIMRDVNMGWMIRMAHANTASFFFIFLYIHIARGLYFSSFILK 107
Query: 216 YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAV 395
+ YVLP GQ+SFWGATVITNLLSAIPY+GT + I GGF+V
Sbjct: 108 GPWMSGVTIIFTLMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGTSITQWIWGGFSV 167
Query: 396 DNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXX 575
DN TLTRF+T +TGS+NPLG++ N+DKIPFHP++T KD
Sbjct: 168 DNPTLTRFFTLHFMLPFILTVLIIIHIFSLHETGSSNPLGISNNIDKIPFHPYYTLKDIM 227
Query: 576 XXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGG 755
PY+ DP+NF ANPL+TP HIQPE YFLFAYAILRSIPNKLGG
Sbjct: 228 GFLIMLLILFTIIMNYPYMFSDPENFLEANPLITPPHIQPEWYFLFAYAILRSIPNKLGG 287
Query: 756 V 758
V
Sbjct: 288 V 288
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 241 bits (590), Expect = 2e-62
Identities = 123/230 (53%), Positives = 144/230 (62%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXX 248
AF + +I R+VNYG IIR LHANGAS FFIC++LHIGRG+YY SF
Sbjct: 62 AFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYSETWNIGIILLL 121
Query: 249 XXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTX 428
YVLP GQ+SFWGATVITNLLSAIPY+GT LV I GG++VD+ TLTRF+T
Sbjct: 122 ATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTF 181
Query: 429 XXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXX 608
+TGSNNPLG+ + DKI FHP++T KD
Sbjct: 182 HFILPFIIAALATLHLLFLHETGSNNPLGITSHSDKITFHPYYTIKDALGLLLFLLSLMT 241
Query: 609 XXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
+P LLGDPDN+T ANPL TP HI+PE YFLFAY ILRS+PNKLGGV
Sbjct: 242 LTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTILRSVPNKLGGV 291
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 214 bits (522), Expect = 3e-54
Identities = 110/241 (45%), Positives = 143/241 (59%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
++ +T ++ +AF V +I R+VN G +R LHANGAS FF+ IYLHIGRG+YY SF++K
Sbjct: 63 AVHYTPEV-NLAFSSVVHIMRDVNGGWFVRNLHANGASAFFMLIYLHIGRGVYYHSFHMK 121
Query: 216 YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAV 395
L YVLP GQ+SFWGATVITNL A+PY+G+ L+ + GG V
Sbjct: 122 KTWLVGCIIFTMLMVTAFTGYVLPWGQMSFWGATVITNLFGAVPYVGSTLMEWVWGGHCV 181
Query: 396 DNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXX 575
+ATL RF+ +TGS+NPLG++ + D +PFH ++ KD
Sbjct: 182 GDATLKRFFVLHFVSPFIIAALVALHLFFLHETGSSNPLGVDSSGDLVPFHNYYLLKDLV 241
Query: 576 XXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGG 755
+P L DP NF ANP+ TPVHIQPE YFLFAY+ILRSIP+KLGG
Sbjct: 242 GMVLMGLALAVVCLNSPDLFLDPTNFIVANPMKTPVHIQPEWYFLFAYSILRSIPSKLGG 301
Query: 756 V 758
V
Sbjct: 302 V 302
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 213 bits (520), Expect = 5e-54
Identities = 115/250 (46%), Positives = 143/250 (57%), Gaps = 1/250 (0%)
Frame = +3
Query: 12 ITXLTIGNSLRFTQQIFE-IAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 188
I L G L F E AF V +I RNVN+G ++R++HANGAS FF C+Y HIGRG
Sbjct: 46 IMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFFFCMYAHIGRG 105
Query: 189 IYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 368
+YY + + V L YVLP GQ+SFWGATVITNLL+AIP +G+ LV
Sbjct: 106 LYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPWGQMSFWGATVITNLLTAIPMVGSPLV 165
Query: 369 N*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFH 548
+ GGF+V TLTRFY+ GS+NPLG++ + KI FH
Sbjct: 166 KWVWGGFSVSGVTLTRFYSLHFILPFVLSMLVLGHVILLHDKGSSNPLGISSDTGKIRFH 225
Query: 549 PFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAIL 728
P+++ KD P++LG P+NF PANPL TP HIQPE YFLFAY IL
Sbjct: 226 PYYSTKDLLGGCVFLTLFMGLVLLYPHMLGAPENFFPANPLSTPAHIQPEWYFLFAYTIL 285
Query: 729 RSIPNKLGGV 758
RS+PNK GV
Sbjct: 286 RSMPNKSLGV 295
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 208 bits (509), Expect = 1e-52
Identities = 113/233 (48%), Positives = 137/233 (58%), Gaps = 2/233 (0%)
Frame = +3
Query: 66 IAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXX 245
+AF V +I R+VN G ++R +HANGASFFFI +YLHIGR +YY S+ L
Sbjct: 60 LAFSSVEHIMRDVNNGWLLRYIHANGASFFFIWVYLHIGRNLYYGSYRSPRGLLWSIGVV 119
Query: 246 XXXXXXXXXX--YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRF 419
YVLP GQ+SFWGATVITNLLSAIP++GT V + GGF+VDNATL RF
Sbjct: 120 IFILMMATAFIGYVLPWGQMSFWGATVITNLLSAIPWIGTDFVLFVWGGFSVDNATLNRF 179
Query: 420 YTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXX 599
++ Q GSNNP G++ + D++ FHP+FT KD
Sbjct: 180 FSLHYLLPFILAALVVMHLLALHQDGSNNPEGISSSSDRLRFHPYFTSKDLVGFVWMAIL 239
Query: 600 XXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
PY LG PDN PANPLVTP I PE YFL YAILR+IP+KLGGV
Sbjct: 240 LSIFVFFAPYYLGHPDNSIPANPLVTPHSIVPEWYFLPFYAILRAIPSKLGGV 292
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 204 bits (498), Expect = 2e-51
Identities = 104/232 (44%), Positives = 133/232 (57%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXX 242
++AF V +I RNV G ++R +HANG+S FFICIY HI RG+YY S+ K V
Sbjct: 75 DMAFDSVVHIMRNVEKGWMLRNIHANGSSMFFICIYAHIARGLYYGSYLDKTVWYFGVHL 134
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y LP GQ+S+WGATVITN+LS P +G ++ + GG+ V NATL RFY
Sbjct: 135 FLLTMAEAFLGYTLPWGQMSYWGATVITNMLSVSPVVGESMLRYVWGGWTVCNATLKRFY 194
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXX 602
T + GSNNPLG+ +PFHPF+T KD
Sbjct: 195 TLHFLLPFVMVAVVFLHLFFLHEKGSNNPLGIESGTMCVPFHPFYTIKDLFGYVCFSFFF 254
Query: 603 XXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
+P LLG+ N+ PANP+ TP+H+QPE YF+FAYAILRSIP+K GGV
Sbjct: 255 MYLVCVDPELLGNHLNYWPANPMKTPIHVQPEWYFMFAYAILRSIPHKAGGV 306
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 203 bits (496), Expect = 4e-51
Identities = 108/243 (44%), Positives = 142/243 (58%), Gaps = 2/243 (0%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL- 212
++ +T + ++AF V +I R+V G ++R +HANGAS FFI +YLHI RG+YY S++
Sbjct: 57 AMHYTPHV-DLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSP 115
Query: 213 -KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 389
++V YVLP GQ+SFWGATVIT+L SAIP +G +V + GGF
Sbjct: 116 REFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGF 175
Query: 390 AVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKD 569
+VDNATL RF++ Q GSNNPLG++ +DKI F+P+F KD
Sbjct: 176 SVDNATLNRFFSLHYLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKD 235
Query: 570 XXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKL 749
P +LG PDN+ PANP+ TP HI PE YFL YAILRSIP+K
Sbjct: 236 LVGWVAFAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKA 295
Query: 750 GGV 758
GGV
Sbjct: 296 GGV 298
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 202 bits (493), Expect = 9e-51
Identities = 102/230 (44%), Positives = 127/230 (55%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXX 248
+F + + RNV++G I R LHANGAS FF+C+YLHI R IY+ ++ K
Sbjct: 69 SFNTIAHTIRNVSWGHITRNLHANGASIFFLCVYLHISRNIYHNTWKNKTTWTLGITIYL 128
Query: 249 XXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTX 428
YVLP GQ+SFW ATVITNL SAIPY+G +V I G F++ NATL RFY+
Sbjct: 129 LMIITAFMGYVLPWGQMSFWAATVITNLFSAIPYIGNTIVLWIWGSFSISNATLNRFYSL 188
Query: 429 XXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXX 608
+ +NP G +D +PFH ++T KD
Sbjct: 189 HYLLPFILTTLIGMHILALQEENHSNPTGTQSEVDSLPFHQYYTTKDSQTIILTTIIIAM 248
Query: 609 XXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
P + DP+NF ANPL+TP HIQPE Y LFAYAILRSIPNKLGGV
Sbjct: 249 IITHIPNIFTDPENFIKANPLITPTHIQPEWYLLFAYAILRSIPNKLGGV 298
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 194 bits (473), Expect = 3e-48
Identities = 104/234 (44%), Positives = 132/234 (56%), Gaps = 4/234 (1%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFN--LKYV*LXXXXX 242
AF V I R+VNYG ++R +HANGAS FFI +Y+H+ RG+YY S+ + +
Sbjct: 73 AFDSVERIMRDVNYGWLMRYMHANGASMFFIVVYVHMFRGLYYGSYKPPREVLWWLGLVI 132
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
YVLP GQ+SFWGATVITNL SAIP +G +V + GGF+VDN TL RF+
Sbjct: 133 LLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVVGDDIVTLLWGGFSVDNPTLNRFF 192
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRN--LDKIPFHPFFTFKDXXXXXXXXX 596
+ SNNPLG++ D IPFHP++T KD
Sbjct: 193 SLHYLFPMLLFAVVFLHMWALHVKKSNNPLGIDAKGPFDTIPFHPYYTVKDAFGLGIFLM 252
Query: 597 XXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
P G+PDN+ PANP+VTP HI PE YFL YAILR++P+KLGGV
Sbjct: 253 VFCFFVFFAPNFFGEPDNYIPANPMVTPTHIVPEWYFLPFYAILRAVPDKLGGV 306
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 192 bits (467), Expect = 1e-47
Identities = 93/161 (57%), Positives = 110/161 (68%)
Frame = +3
Query: 276 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 455
YVLP GQ+SFWGATVITNL+SA+PY+GT++V + GGFAVDNATLTRF++
Sbjct: 133 YVLPWGQMSFWGATVITNLVSAVPYMGTMIVQWLWGGFAVDNATLTRFFSFHFILPFIIA 192
Query: 456 XXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLL 635
QTGSNNP G+++NLDK+ FHPFF+ KD PY L
Sbjct: 193 AMVILHLLFLHQTGSNNPAGMSKNLDKVSFHPFFSVKDSMGFIMLISFYMFISLMLPYDL 252
Query: 636 GDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
GD +NF ANPLVTP+HI+PE YFLFAYAILRSIPNKLGGV
Sbjct: 253 GDSENFIFANPLVTPIHIKPEWYFLFAYAILRSIPNKLGGV 293
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 190 bits (464), Expect = 3e-47
Identities = 94/161 (58%), Positives = 107/161 (66%)
Frame = +3
Query: 276 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 455
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLVQWIWGGFSVDNATLTRFFAFHFLFPFVIA 191
Query: 456 XXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLL 635
+TGSNNP GLN + DKI FHP+F++KD +P +L
Sbjct: 192 GATVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLALFSPNML 251
Query: 636 GDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
GD +NF PANPLVTP HIQPE YFLFAYAILRSIPNKLGGV
Sbjct: 252 GDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGV 292
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 186 bits (452), Expect = 9e-46
Identities = 92/179 (51%), Positives = 107/179 (59%)
Frame = +3
Query: 135 ANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 314
ANGASFFFIC+Y+HIGRGI+Y S+ + + YVLP GQ+SFWGA
Sbjct: 1 ANGASFFFICLYIHIGRGIFYGSYMTFHAWMIGVVILFMVMAAAFLGYVLPWGQMSFWGA 60
Query: 315 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 494
TVITNL SAIP++GT LV I GGF+V NATLTRF+T Q
Sbjct: 61 TVITNLFSAIPFIGTDLVQWIWGGFSVGNATLTRFFTFHFILPFIVLAASLVHILFLHQA 120
Query: 495 GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPL 671
G+NNPLG++ DKIPFHP+FTFKD NPYLLGDPDNF PANPL
Sbjct: 121 GANNPLGISSQSDKIPFHPYFTFKDIVGFVVMLSALIILTLLNPYLLGDPDNFVPANPL 179
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 180 bits (438), Expect = 4e-44
Identities = 100/236 (42%), Positives = 126/236 (53%), Gaps = 4/236 (1%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFN--LKYV*LXXX 236
++AF V I R+VNYG ++R +HA GAS FF +Y+H+ RG+YY S+ + + +
Sbjct: 73 DLAFKSVELIVRDVNYGWLLRNMHACGASMFFFAVYVHMLRGLYYGSYKEPREVLWILGV 132
Query: 237 XXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTR 416
YVLP GQ+SFWGATVITNL SAIPY G +V + GG++V N TL R
Sbjct: 133 IIYLLMMATGFMGYVLPWGQMSFWGATVITNLFSAIPYFGESIVTLLWGGYSVGNPTLNR 192
Query: 417 FYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDK--IPFHPFFTFKDXXXXXXX 590
F++ G NNP G+ +K +PF P T KD
Sbjct: 193 FFSLHYLLPFLIAGVVVLHVWALHVAGQNNPEGVEPKSEKDTVPFTPHATIKDMFGVACF 252
Query: 591 XXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
P LGD DN+ PANP VTP HI PE Y+L YAILRSIPNKL GV
Sbjct: 253 LLLYAWFIFYMPNYLGDADNYIPANPGVTPPHIVPEWYYLPFYAILRSIPNKLAGV 308
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 175 bits (426), Expect = 1e-42
Identities = 97/240 (40%), Positives = 124/240 (51%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
++ +T I +AF V +I R+V G I++ HA GAS FFICIY+HI RG+YY + K
Sbjct: 44 AIHYTANI-NLAFSSVVHITRDVPCGWIMQNTHAIGASLFFICIYIHIARGLYYGLYLNK 102
Query: 216 YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAV 395
V L YVLP GQ+SFW ATVITNLL+AIPYLG + + GGF++
Sbjct: 103 NVWLSGVTLLMTLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGVAVTTWLWGGFSI 162
Query: 396 DNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXX 575
++ TLTRF GSNNPLG N ++DKIPFHP+ ++KD
Sbjct: 163 NDPTLTRFCALHFILPFIIISLSSIHIILLHNEGSNNPLGTNSDIDKIPFHPYHSYKDFM 222
Query: 576 XXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGG 755
+P LL DP+ T NP Y +LRSIPNKLGG
Sbjct: 223 TTTSMIILLPISLSVSPDLLXDPEKLTKPNPXXXXXXXXXXXXXXXXYGLLRSIPNKLGG 282
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 173 bits (421), Expect = 5e-42
Identities = 100/232 (43%), Positives = 121/232 (52%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXX 242
E AF V I +V +G + R++HANGASFFF +YLHIGRG+Y + L V +
Sbjct: 65 EEAFSSVVMIVDDVPFGWMFRSIHANGASFFFFWVYLHIGRGLYLSKYKLNPVWMKGVLI 124
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
YV P GQI GATVIT+LLSAIPY+G LV + GGF V TL RF+
Sbjct: 125 FFFLMGTAFMGYVPPWGQIFLGGATVITSLLSAIPYMGGFLVKWVWGGFFVKGPTLHRFF 184
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXX 602
+ NP+G + N K F P+F F D
Sbjct: 185 SLHYLLPLILSVFVFFQVFFFQSKSGVNPMGGSLNSKKGFFVPYFFFVDLGGIFFFFFFF 244
Query: 603 XXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
+L DPDNF PANP+ TP HIQPE YFLFAY ILRS+P+KLGGV
Sbjct: 245 FMFVFVFHDVLMDPDNFIPANPMSTPPHIQPEWYFLFAYTILRSVPSKLGGV 296
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 167 bits (406), Expect = 3e-40
Identities = 95/244 (38%), Positives = 130/244 (53%), Gaps = 1/244 (0%)
Frame = +3
Query: 30 GNSLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFN 209
G L F + E F + I YG ++ +H N +S F IYLH+ +G+ + SF+
Sbjct: 43 GLFLTFYYENSENCFDSIYIIHIETFYGVLVHFIHLNVSSIIFFLIYLHMTKGLIFSSFS 102
Query: 210 L-KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GG 386
+ K + YVLP GQ+S WGATVITNLLSAIP +G ++V I GG
Sbjct: 103 MMKITWISGWIMMMLSMLSAFMGYVLPWGQMSLWGATVITNLLSAIPVIGKMMVEWIWGG 162
Query: 387 FAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFK 566
+ V N T+ F++ GSNNP+G N +L KI F+P ++FK
Sbjct: 163 YFVSNFTMKMFFSFHFLVPFIILIFIMIHLIILHYYGSNNPIG-NFSLMKIEFNPIYSFK 221
Query: 567 DXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNK 746
D +PY + DP+NF +NP+++P+HIQPE YFL YAILR+IPNK
Sbjct: 222 DLMSIIFIILMFVLFFY-SPYFMVDPENFIKSNPMISPIHIQPEWYFLQYYAILRAIPNK 280
Query: 747 LGGV 758
LGGV
Sbjct: 281 LGGV 284
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 166 bits (404), Expect = 6e-40
Identities = 98/243 (40%), Positives = 124/243 (51%), Gaps = 10/243 (4%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL- 212
++ +T + ++AF V +I RNVN G ++R LHANGAS FFI +YLHI RG+YY S+
Sbjct: 66 AMHYTPHV-DLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAP 124
Query: 213 -KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 389
+ + YVLP GQ+SFWGATVIT L AIP +G + + GG
Sbjct: 125 REVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGP 184
Query: 390 AVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL--------NRNLDKIPF 545
AVDNATL RF++ TG+NNP G+ D +PF
Sbjct: 185 AVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPF 244
Query: 546 HPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAI 725
P+F KD P LG PDN+ ANPL TP HI PE YFL YAI
Sbjct: 245 WPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAI 304
Query: 726 LRS 734
LR+
Sbjct: 305 LRA 307
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 166 bits (403), Expect = 8e-40
Identities = 92/241 (38%), Positives = 125/241 (51%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
SL + E AF + +I R+VN G I+R++H GAS FF +Y H+GRG+YY S+
Sbjct: 53 SLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSFFFFMYCHVGRGLYYGSYKNF 112
Query: 216 YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAV 395
YVLP GQ+SFWGATVI+N L+ IP+ G L+ + GG++V
Sbjct: 113 KAWSMGVAILALSMLEGFMGYVLPAGQMSFWGATVISNFLTVIPFFGDTLLKYVLGGYSV 172
Query: 396 DNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXX 575
+ TL+RF+ + G++NPLG++ D I P + FKD
Sbjct: 173 CDLTLSRFFVAHFLAPFLISLMVLFHLIWGHEKGASNPLGVSTT-DWITLSPGYVFKDLA 231
Query: 576 XXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGG 755
+L DP N ANP+ TPVHIQPE YFLFAY+ILR + +K GG
Sbjct: 232 GGFFMESLVLGMFSSYSWLFQDPTNSIMANPMYTPVHIQPEWYFLFAYSILRCVDSKTGG 291
Query: 756 V 758
V
Sbjct: 292 V 292
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 164 bits (399), Expect = 2e-39
Identities = 92/233 (39%), Positives = 124/233 (53%), Gaps = 2/233 (0%)
Frame = +3
Query: 66 IAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXX 239
+AFY V ++ +V YG +IR H NGAS FF+ ++LH+ R +YY S + + + +
Sbjct: 60 LAFYSVIHLTVDVPYGFVIRYFHMNGASLFFVAVFLHLFRNLYYNSGSQPRELLYISGVV 119
Query: 240 XXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRF 419
YVLP GQ+SFWGATVIT+L+SA+P +GT LV + GGF+V N TL RF
Sbjct: 120 ILLLMVITAFIGYVLPWGQMSFWGATVITSLVSAVPIVGTDLVYYLWGGFSVSNPTLNRF 179
Query: 420 YTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXX 599
++ GS NPL +N ++ K+PF ++ KD
Sbjct: 180 FSFHYLLPFVLAGLSIAHLAALHSYGSTNPLSIN-SVAKVPFGSYYIIKDLLGVLIIGAA 238
Query: 600 XXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
P L DN+ PANP TP HI PE YFL YAILRSIP+K G+
Sbjct: 239 MIVLAFFFPEALNHSDNYIPANPYSTPAHIVPEWYFLPVYAILRSIPDKGIGI 291
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 164 bits (399), Expect = 2e-39
Identities = 87/232 (37%), Positives = 123/232 (53%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXX 242
++AF V++I + V+ G +R+ H N A+F CIY+HIGRG+YY SF L V
Sbjct: 61 DLAFSSVSFIMKEVSMGWAMRSFHINVANFMLGCIYVHIGRGLYYGSFRLYKVWASGIIL 120
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
YVLP GQ+++W A VI+++++AIP +G + + GG+AV N TL R +
Sbjct: 121 LVLVMLAAFTGYVLPWGQMAYWAAQVISSMVTAIPKVGGEVAMWVWGGYAVGNITLKRLF 180
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXX 602
+ +GS NPLGL+ + + FH FF+ KD
Sbjct: 181 SVHFLLPFVILAVVLLHLLFLHSSGSGNPLGLDSDCSLVRFHSFFSVKDLLGVSGGCCFL 240
Query: 603 XXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
PY L D ++F P + + TP I PE YFLFAYAILRS+PNK GG+
Sbjct: 241 IFMVSFYPYSLVDGESFVPCDYMDTPPSIHPEWYFLFAYAILRSVPNKAGGI 292
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 164 bits (398), Expect = 3e-39
Identities = 93/234 (39%), Positives = 120/234 (51%), Gaps = 2/234 (0%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXX 242
+ AF + +I R+VNYG +IR H NGAS FF +Y+HIGRGIYY + V
Sbjct: 58 DYAFDSIVHINRDVNYGALIRGFHINGASMFFFFMYIHIGRGIYYGCYRQAGVWYTGIIL 117
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
YVLP GQ+S+W + VIT+LLS IPY+G LV I GGF+V ATLTRFY
Sbjct: 118 MLLLMATSFLGYVLPWGQMSYWASVVITSLLSTIPYIGPSLVEWIWGGFSVGQATLTRFY 177
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL--NRNLDKIPFHPFFTFKDXXXXXXXXX 596
+ +TGS+NPLGL + FHP ++ D
Sbjct: 178 SLHFILPFVMVIVVIIHVGLLHETGSSNPLGLYDPSGVCMRSFHPLYSCNDLFFCLVAMG 237
Query: 597 XXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
+ + +N+ A+P+ TP HI PE YFL+ Y ILRS P K GGV
Sbjct: 238 YLIKLSAFHTWAFVPCENWIKADPMTTPKHITPEWYFLWVYTILRSAPTKGGGV 291
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 163 bits (395), Expect = 7e-39
Identities = 95/242 (39%), Positives = 123/242 (50%), Gaps = 10/242 (4%)
Frame = +3
Query: 39 LRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL-- 212
+ +T + ++AF V +I R+VN G ++R LHANGAS FF+ +Y+HI RG+YY S+
Sbjct: 67 MHYTPHV-DLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIHIFRGLYYGSYKAPR 125
Query: 213 KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFA 392
+ + YVLP GQ+SFWGATVIT L AIP +G + + GG A
Sbjct: 126 EVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGVGEAIQTWLLGGPA 185
Query: 393 VDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL--------NRNLDKIPFH 548
VDN TL RF++ TG+NNP G+ D +PF
Sbjct: 186 VDNPTLNRFFSLHYLLPFVIAALVVVHIWAFHTTGNNNPTGVEVRRGSKEEAKKDTLPFW 245
Query: 549 PFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAIL 728
P+F KD P LG PDN+ ANPLVTP HI PE YFL YAIL
Sbjct: 246 PYFVIKDLFALAVVLVVFFAIVGFMPNYLGHPDNYIEANPLVTPAHIVPEWYFLPFYAIL 305
Query: 729 RS 734
R+
Sbjct: 306 RA 307
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 156 bits (378), Expect = 8e-37
Identities = 91/231 (39%), Positives = 118/231 (51%)
Frame = +3
Query: 66 IAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXX 245
+AF V YI VN+G + R H NGAS FFI +YLHI +G+++ S+ LK V +
Sbjct: 58 MAFSTVQYIMYEVNFGWVFRIFHFNGASLFFIFLYLHIFKGLFFMSYRLKKVWMSGLTIY 117
Query: 246 XXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 425
YVL Q+SFW A VIT+LLS IP G +V I GF V ATL F+
Sbjct: 118 LLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPTIVTWIWSGFGVTGATLKFFFV 177
Query: 426 XXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXX 605
TGS + L + + DK+ F P + KD
Sbjct: 178 LHFLLPWAILVIVLGHLIFLHSTGSTSSLYCHGDYDKVCFSPEYLGKDAYNIVIWLLFIV 237
Query: 606 XXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
P+ LGD + F A+P+++PVHI PE YFLFAYAILR+IPNK+ GV
Sbjct: 238 LSLIY-PFNLGDAEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGV 287
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 154 bits (374), Expect = 2e-36
Identities = 88/223 (39%), Positives = 114/223 (51%)
Frame = +3
Query: 90 ICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXX 269
I ++V G IR +H++G S F +YLHI RG+ Y SF V
Sbjct: 65 IMQDVWGGWFIRFIHSSGVSLFMFIMYLHILRGLIYGSFCKVDVWYSGILLLFICMGSAF 124
Query: 270 XXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXX 449
YVLP G +S+WG TV+TN+LSAIP +G LV I GG + +TL RF++
Sbjct: 125 LGYVLPWGSMSYWGMTVVTNMLSAIPMVGVYLVETIWGGSSAGVSTLVRFFSFHYLLSLF 184
Query: 450 XXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPY 629
+ GS+NPLG+ + +K FHP F+ KD PY
Sbjct: 185 IMVFILIHLILLHECGSSNPLGVYYSCEKFTFHPLFSLKDTLVFVLVVFLYWFCIFVCPY 244
Query: 630 LLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
LL D NF N ++TP HI+PE YFLF Y ILRS P+KLGGV
Sbjct: 245 LLLDAINFEEINFMMTPSHIKPEWYFLFIYCILRSTPSKLGGV 287
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 152 bits (369), Expect = 1e-35
Identities = 77/129 (59%), Positives = 89/129 (68%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
++ +T I AF V +ICR+VNYG IIR LHANGASFFFICIYLHIGRG+YY S+ K
Sbjct: 48 AMHYTSDI-STAFSSVVHICRDVNYGWIIRNLHANGASFFFICIYLHIGRGLYYGSYMYK 106
Query: 216 YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAV 395
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+V
Sbjct: 107 ETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSV 166
Query: 396 DNATLTRFY 422
DNATLTRF+
Sbjct: 167 DNATLTRFF 175
Score = 152 bits (369), Expect = 1e-35
Identities = 77/129 (59%), Positives = 89/129 (68%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
++ +T I AF V +ICR+VNYG IIR LHANGASFFFICIYLHIGRG+YY S+ K
Sbjct: 235 AMHYTSDI-STAFSSVVHICRDVNYGWIIRNLHANGASFFFICIYLHIGRGLYYGSYMYK 293
Query: 216 YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAV 395
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+V
Sbjct: 294 ETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSV 353
Query: 396 DNATLTRFY 422
DNATLTRF+
Sbjct: 354 DNATLTRFF 362
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 152 bits (368), Expect = 1e-35
Identities = 82/232 (35%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Frame = +3
Query: 66 IAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESF-NLKYV*LXXXXX 242
+A ++Y+ R+ NYG IIR+LH GAS FF Y H+ RG++Y ++ +V
Sbjct: 62 LAVVSIDYMMRDANYGWIIRSLHMGGASLFFALTYAHVARGVFYGAYLKNPHVWYSGLSL 121
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
YVLP G +S+WG TVITN+++ +P G ++ GGF + + TL R +
Sbjct: 122 YILSMGVGFLGYVLPWGVMSYWGLTVITNMMTVVPG-GARALDWFQGGFVISSLTLKRVF 180
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXX 602
Q GS+NPLGL++ +PFHP+++ KD
Sbjct: 181 VLHFILPFVILGLALVHVLILHQNGSSNPLGLDQEGINVPFHPYYSIKDLAGFAVLVAML 240
Query: 603 XXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
+ DP + P N + TP I+PE YFL+AYAILRSIP+K GGV
Sbjct: 241 IGMAFTFASVTADPLQWQPINKMKTPAVIKPEWYFLYAYAILRSIPHKAGGV 292
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 151 bits (366), Expect = 2e-35
Identities = 85/230 (36%), Positives = 118/230 (51%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXX 248
AF + + R V +G ++R +H NGASF F+ +Y H+ +G+ Y SF L L
Sbjct: 59 AFNSIITLMREVKFGFLLRFMHLNGASFIFMTMYAHMFKGLMYSSFMLPGSWLTGNLILF 118
Query: 249 XXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTX 428
YV+P G +SFW ATVIT+ +SAIP LG ++ I GG+++ TL F+T
Sbjct: 119 LMILVAFMGYVIPWGNMSFWAATVITSFMSAIPILGESILYWIWGGYSITGRTLQFFFTL 178
Query: 429 XXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXX 608
GS+NPLG + ++ K FHPFFT KD
Sbjct: 179 HYLLPFVISAIAMIHLLLLHSKGSSNPLGTHSHMLKTKFHPFFTNKDMMNIMILMIMGWS 238
Query: 609 XXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
PY DP+NF+ A+ L +P++IQPE YFL Y LRS +KLGG+
Sbjct: 239 LISY-PYWSSDPENFSYADRLSSPINIQPEWYFLPMYGFLRSSDSKLGGL 287
>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
Cytochrome b - Procladius villosimanus
Length = 233
Score = 150 bits (364), Expect = 4e-35
Identities = 75/134 (55%), Positives = 83/134 (61%)
Frame = +3
Query: 318 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTG 497
VITNLLSAIPYLG L + GGFAVDNATLTRF+ QTG
Sbjct: 1 VITNLLSAIPYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALTTIHLLFLHQTG 60
Query: 498 SNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVT 677
S NPLG+N N+DKIPFHP+FT+KD +PY +GDPDNF PANPLVT
Sbjct: 61 SPNPLGINSNVDKIPFHPYFTYKDIFGFVAMTMILIMLTLISPYGMGDPDNFIPANPLVT 120
Query: 678 PVHIQPE*YFLFAY 719
P HIQPE YFLFAY
Sbjct: 121 PPHIQPEWYFLFAY 134
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 146 bits (353), Expect = 9e-34
Identities = 85/230 (36%), Positives = 118/230 (51%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXX 248
AF V YI VN G ++R +H+NGAS FF+ IYLHI +G+ S+ L V +
Sbjct: 51 AFSSVQYIMFEVNLGWLVRIMHSNGASMFFLFIYLHIFKGLINSSYRLSSVWISGIAMYL 110
Query: 249 XXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTX 428
YVL GQ+S+W A VIT+L++++PYLG +V I G F+V TL FY+
Sbjct: 111 VLMGIAFTGYVLIWGQMSYWAAVVITSLMTSVPYLGKYMVWWIWGSFSVCENTLKFFYSI 170
Query: 429 XXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXX 608
TGS++ L + + DKI F P + FKD
Sbjct: 171 HFIFPWLLLVMVIFHLFFLHFTGSSSSLYCHGDYDKIHFFPSYWFKDGFDIFFYFFLVLF 230
Query: 609 XXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
+ + L DP F ++ + +P H+ PE YFLFA+ ILRS+PNKL GV
Sbjct: 231 SLYFS-FNLSDPMIFVESDSMASPAHVVPEWYFLFAFTILRSVPNKLFGV 279
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 145 bits (352), Expect = 1e-33
Identities = 72/129 (55%), Positives = 88/129 (68%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
++ +T I AF V +ICR+VNYG +IR+LHANGASFFFIC+Y+HI RG+YY S+ K
Sbjct: 52 AMHYTSDI-STAFSSVTHICRDVNYGWLIRSLHANGASFFFICLYMHIARGLYYGSYLYK 110
Query: 216 YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAV 395
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+V
Sbjct: 111 ETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDTLVQWIWGGFSV 170
Query: 396 DNATLTRFY 422
D ATLTRF+
Sbjct: 171 DXATLTRFF 179
Score = 91.1 bits (216), Expect = 3e-17
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = +3
Query: 621 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
+P LLGDP+NFTPANPLVTP HIQPE YFLFAYAILRSIPNKLGGV
Sbjct: 211 SPNLLGDPENFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGV 256
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 144 bits (348), Expect = 4e-33
Identities = 71/130 (54%), Positives = 86/130 (66%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
++ +T I +AF V +ICR+V YG ++R LH NGAS FF CIYLHIGRG+YY S LK
Sbjct: 9 AMHYTPHI-SLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFCIYLHIGRGLYYGSHTLK 67
Query: 216 YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAV 395
YVLP GQ+SFWGATVITNL SA+PY+G LV+ GGFA+
Sbjct: 68 KTWYTGTMLLLMLMATAFLGYVLPWGQMSFWGATVITNLSSALPYIGPTLVHWTWGGFAI 127
Query: 396 DNATLTRFYT 425
DNATLTRF+T
Sbjct: 128 DNATLTRFFT 137
Score = 67.3 bits (157), Expect = 5e-10
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +3
Query: 657 PANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
PANPL+TP HI+PE YFLFAYAILRSIPNK+GGV
Sbjct: 148 PANPLITPPHIKPEWYFLFAYAILRSIPNKIGGV 181
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 138 bits (335), Expect = 1e-31
Identities = 85/245 (34%), Positives = 118/245 (48%), Gaps = 4/245 (1%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL- 212
++ +T I + AF V I R V G IR+LH G + F C+Y+HIGR ++Y S+
Sbjct: 64 AINYTPDITQ-AFASVEAIDRQVPSGWFIRSLHMGGVTMLFACLYIHIGRSLWYGSYKAP 122
Query: 213 -KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 389
+ + L YVLP GQ+S+WGATVI N + AIP +G L + GG
Sbjct: 123 RELLWLTGLGLMLMVMVTAFAGYVLPWGQMSYWGATVILNAVHAIPLIGQPLSELLLGGD 182
Query: 390 AVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLN--RNLDKIPFHPFFTF 563
+ N L R + SNNP G++ +PFHP++T
Sbjct: 183 TLGNVALHRLFVLHFTMAFAILGVIALHVAALHVVKSNNPSGVDPVNPSQTLPFHPYYTS 242
Query: 564 KDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPN 743
+D P LL DN+ ANPLVTP I+PE YF YAILR++P+
Sbjct: 243 RDGFALCLFLMVYAGLVFFLPDLLTLADNYIQANPLVTPRDIRPEWYFAPFYAILRAVPS 302
Query: 744 KLGGV 758
+LGG+
Sbjct: 303 RLGGL 307
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 138 bits (335), Expect = 1e-31
Identities = 88/247 (35%), Positives = 120/247 (48%), Gaps = 18/247 (7%)
Frame = +3
Query: 66 IAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXX 239
+AF V YI R+V++G +IR +H+ GAS FFI IYLH+ RG+ S+ + + +
Sbjct: 69 LAFASVEYIMRDVDWGWLIRYMHSTGASMFFIVIYLHMFRGLLRGSYRKPRELLWMIGVV 128
Query: 240 XXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRF 419
Y+LP GQ+S+WGA VI NL +A+P +G L + G F + +ATL RF
Sbjct: 129 IYLVMMATAFFGYLLPWGQMSYWGAQVIVNLFAAVPVVGEDLSVWVRGDFVISDATLNRF 188
Query: 420 YTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL--------NRNLDK-----IPFHPFFT 560
+ GSNNP G+ NR DK IPFHP++T
Sbjct: 189 FAFHFLLPFLLAGLVFLHIVALHHVGSNNPDGIEIKEGPKGNRWSDKAPADGIPFHPYYT 248
Query: 561 FKDXXXXXXXXXXXXXXXXXNPYLLG---DPDNFTPANPLVTPVHIQPE*YFLFAYAILR 731
KD NP + G + NF PANP+ TP HI P YF YA+LR
Sbjct: 249 VKDLMGVVVFLAIFGYVMFFNPTMGGLFLEAPNFQPANPMQTPAHIAPVWYFTPFYAMLR 308
Query: 732 SIPNKLG 752
++P G
Sbjct: 309 AVPPMYG 315
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 134 bits (325), Expect = 2e-30
Identities = 87/232 (37%), Positives = 117/232 (50%), Gaps = 1/232 (0%)
Frame = +3
Query: 66 IAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXX 245
+A+ V I R V G ++R++H+N ASF F +++H RGI SF L +
Sbjct: 54 LAWSSVVEITREVYAGWLVRSIHSNTASFVFFLMFMHFFRGIIQSSFYLVLPWISGFVLM 113
Query: 246 XXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 425
YVLP GQ+SFWGATVI NLLS +PY G +LV + GGF V AT + F+
Sbjct: 114 LLTMAAAFLGYVLPWGQMSFWGATVIINLLSILPY-GKMLVVWLWGGFYVSAATCSFFFA 172
Query: 426 XXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLD-KIPFHPFFTFKDXXXXXXXXXXX 602
+GS++ G+N + K+ F F+ KD
Sbjct: 173 LHYIVPFAVLVVIMVHLFFLHFSGSSSFGGMNYSDSLKVKFGLLFSLKDMVNVIFIWVGF 232
Query: 603 XXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
P L DP NF PA+ +PVHIQPE YFL YA+LR+IPNK+GG+
Sbjct: 233 LVILSM-PDLFSDPVNFLPADLSSSPVHIQPEWYFLHFYAVLRAIPNKVGGL 283
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 132 bits (318), Expect = 2e-29
Identities = 70/171 (40%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*L--XXX 236
E+AF V +I R+V+ G I+R LHANGASFFF+ +++H+ +G+YY S+ V L
Sbjct: 59 ELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGV 118
Query: 237 XXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTR 416
Y GQ+S WGATVITNL SAIP++G +V+ + GGF+V N T+ R
Sbjct: 119 IIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQR 178
Query: 417 FYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKD 569
F+ GS+NPLG+ NLD+IP H +F FKD
Sbjct: 179 FFALHYLVPFIIAAMVIMHLMALHIHGSSNPLGITGNLDRIPMHSYFIFKD 229
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 131 bits (317), Expect = 2e-29
Identities = 84/241 (34%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYES-FNL 212
+L +T + A++ + ++ R V YG +R H++GASF F+ ++LH+GR ++Y S F
Sbjct: 59 ALHYTSDL-NSAYFSLFFLIREVFYGWCLRYFHSSGASFVFLFLFLHLGRAMFYGSYFYN 117
Query: 213 KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFA 392
YVLP GQ+SFWGATVITNLLS P L+ + GG+
Sbjct: 118 PNTWFSGIILFLFLMAIAFMGYVLPFGQMSFWGATVITNLLSPFP----SLIEWVSGGYC 173
Query: 393 VDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDX 572
V + TL RF+ SNNPL + N +KIPF P KD
Sbjct: 174 VHSPTLKRFFLFHYQLPFLVCGFSILHLFYLHFLSSNNPLRNSTN-NKIPFFPLIFDKDF 232
Query: 573 XXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLG 752
L PDN A L+TP+HI PE YFL YA+L+++PNK
Sbjct: 233 FGLILVLCLYFFETHFGVSSLSHPDNALEACALLTPLHIVPEWYFLCQYAMLKAVPNKNA 292
Query: 753 G 755
G
Sbjct: 293 G 293
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 130 bits (314), Expect = 5e-29
Identities = 82/241 (34%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
AF + I R V +G +IR H GAS FF +Y+H+ RG+YY S+ + V L
Sbjct: 77 AFNSIEAIMRYVGFGWLIRYGHMVGASLFFAALYIHMFRGVYYGSYKAPREVVWLIGVLL 136
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y L GQ+S+W A VIT L S +P++G + + GGFA + AT+ RF+
Sbjct: 137 FMLAMATAFLGYSLVWGQMSYWAAQVITGLFSVVPFVGEKIRIWVLGGFAPNAATVNRFF 196
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLN--RNLDKIPFHPFFTFKDXXXXXXXXX 596
+ GS NP G+ + + +P P++ KD
Sbjct: 197 VLHFTLPFVILAVVGLHVWALHRQGSGNPTGIEVKKAEEVVPMQPYYIAKDFVAICVFLL 256
Query: 597 XXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRS-------IPNKLGG 755
P + DPDN+ PANP TP HI+PE YF YA+LRS IP KL G
Sbjct: 257 IFCSLVFFYPNVFTDPDNYIPANPFSTPAHIKPEWYFWPFYAVLRSFTVNFMGIPAKLWG 316
Query: 756 V 758
V
Sbjct: 317 V 317
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 130 bits (314), Expect = 5e-29
Identities = 85/245 (34%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
AF V YI R+V +G +IR +H+ GAS FF+ +YLH+ RG+ Y S+ + V +
Sbjct: 83 AFESVEYIMRDVPWGWLIRYMHSTGASAFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAI 142
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y+LP GQ+S+WGA VI NL SAIP++G L I G + V +ATL RF+
Sbjct: 143 FLALMAEAFMGYLLPWGQMSYWGAQVIVNLFSAIPFIGPDLALLIRGDYVVSDATLNRFF 202
Query: 423 T-XXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL------------NRNLDKIPFHPFFTF 563
+ GSNNP G+ LD +PFHP++T
Sbjct: 203 SFHVIAVPLVLLGLVVAHLLALHDVGSNNPDGIEIKGPGKPVDEHGHPLDGVPFHPYYTV 262
Query: 564 KDXXXXXXXXXXXXXXXXXNPYLLG---DPDNFTPANPLVTPVHIQPE*YFLFAYAILRS 734
D P L G + +NF PA+PL TP HI P YF Y++LR+
Sbjct: 263 HDILGVGVFLFIFSAVVFFAPELGGYFLEYNNFIPADPLQTPAHIAPVWYFTPFYSMLRA 322
Query: 735 IPNKL 749
I ++
Sbjct: 323 ITTEM 327
>UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep:
Cytochrome b - Aleyrodes elevatus
Length = 232
Score = 125 bits (301), Expect = 2e-27
Identities = 66/148 (44%), Positives = 84/148 (56%)
Frame = +3
Query: 315 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 494
TVITNLLS+IP G ++V I GG++V N TL RF++
Sbjct: 1 TVITNLLSSIPIWGEMIVYWIWGGYSVGNPTLIRFFSFHFFFPFLMIFTIFLHLIFLHGH 60
Query: 495 GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLV 674
GS NPLGL + DKI F+P+F KD P +L D +NF AN ++
Sbjct: 61 GSGNPLGLGGSYDKIYFYPYFMLKDFIGFFFFYIYLFICGFFFPLILVDSENFIVANSMI 120
Query: 675 TPVHIQPE*YFLFAYAILRSIPNKLGGV 758
TP+HIQPE Y+LF+YAILRS+PNKLGGV
Sbjct: 121 TPLHIQPEWYYLFSYAILRSVPNKLGGV 148
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 125 bits (301), Expect = 2e-27
Identities = 83/239 (34%), Positives = 109/239 (45%)
Frame = +3
Query: 42 RFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV 221
R+T + A+Y + +I R + G R +HA GAS F+ YLHI RG+ Y L
Sbjct: 49 RYTPDV-SYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHILRGLNYSYMYLPLS 107
Query: 222 *LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDN 401
+ YVLP GQ+S+WGATVITNLLS+IP + V I GG+ V +
Sbjct: 108 WISGLILFMIFIVTAFVGYVLPWGQMSYWGATVITNLLSSIP----VAVIWICGGYTVSD 163
Query: 402 ATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXX 581
T+ RF+ GS NPLG + L KIPF+P D
Sbjct: 164 PTIKRFFVLHFILPFIGLCIVFIHIFFLHLHGSTNPLGYDTAL-KIPFYPNLLSLDVKGF 222
Query: 582 XXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
L PDN N VTP I PE YFL YA+L+++P+K G+
Sbjct: 223 NNVIILFLIQSLFGIIPLSHPDNAIVVNTYVTPSQIVPEWYFLPFYAMLKTVPSKPAGL 281
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 123 bits (297), Expect = 5e-27
Identities = 57/90 (63%), Positives = 64/90 (71%)
Frame = +3
Query: 489 QTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANP 668
+TGSNNP GLN + DKIPFHP++T KD P +LGDPDN+TPANP
Sbjct: 121 ETGSNNPTGLNSDADKIPFHPYYTIKDLLGALLLLMALMILVLFFPDILGDPDNYTPANP 180
Query: 669 LVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
L TP HI+PE YFLFAYAILRSIPNKLGGV
Sbjct: 181 LNTPPHIKPEWYFLFAYAILRSIPNKLGGV 210
Score = 78.2 bits (184), Expect = 3e-13
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL 212
AF V +ICR+VNYG +IR +HANGAS FFIC++LH+GRG+YY S+N+
Sbjct: 43 AFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGVYYGSYNM 90
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 118 bits (285), Expect = 2e-25
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 2/216 (0%)
Frame = +3
Query: 117 IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQ 296
IIR +H S F +Y+HIGR +YY S+ + V Y+LP Q
Sbjct: 67 IIRYIHIWCVSIIFFLVYVHIGRSLYYSSYRMIGVWNVGFFIYVILMVEAFLGYILPWHQ 126
Query: 297 ISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNA-TLTRFYTXXXXXXXXXXXXXXXX 473
+S+W ATV+T+++ ++P +G ++ + + GGF+V TL R +
Sbjct: 127 MSYWAATVLTSIILSVPVVGGLIFSYVVGGFSVTLIDTLVRVFPVHISLGFILLGLIVLH 186
Query: 474 XXXXXQTGSNNPLGL-NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDN 650
Q+GS +PL N D + FH + T KD +P ++ D +
Sbjct: 187 LFYLHQSGSTSPLFFYNGYSDCVYFHSYHTIKDLFAFMVVIVFSNFLVLVDPNIILDVEA 246
Query: 651 FTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
F ANPLVTP I+PE YFL YA+LRSI +K+GG+
Sbjct: 247 FIVANPLVTPDSIKPEWYFLLFYAMLRSINSKVGGL 282
>UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:
Cytochrome b - Partula turgida
Length = 211
Score = 118 bits (285), Expect = 2e-25
Identities = 60/125 (48%), Positives = 71/125 (56%)
Frame = +3
Query: 381 GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFT 560
GGF+V ATL RF++ + GS NPLG N +++KI FHP+FT
Sbjct: 6 GGFSVGQATLNRFFSLHFILPFIILVLVIVHLMFLHEKGSTNPLGHNMHINKILFHPYFT 65
Query: 561 FKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIP 740
KD PYLL DP+N AN +VTPVHIQPE YFLFAYAILRSIP
Sbjct: 66 LKDVVGFLLVLFCLIMMCAYFPYLLSDPENLINANSMVTPVHIQPEWYFLFAYAILRSIP 125
Query: 741 NKLGG 755
+KLGG
Sbjct: 126 SKLGG 130
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 116 bits (278), Expect = 1e-24
Identities = 90/234 (38%), Positives = 116/234 (49%), Gaps = 2/234 (0%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFN--LKYV*LXXX 236
++AF V ++ R+V G ++R +HANGAS F I ++L I RG ++ ++V
Sbjct: 51 DLAFNSVEHVMRDVEGGWLLRYMHANGASMFLIVVHLXIFRGXXXXXYSSXXEFVRCXGV 110
Query: 237 XXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTR 416
GQ+SFWG + AI +G V GF+VD TL
Sbjct: 111 VXXXXMIVXAXXGXXPXXGQMSFWGXXXXXSXXXAIXXVGDTXVTXXXXGFSVDXXTLNX 170
Query: 417 FYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXX 596
+ Q GSNNPLG++ +DKI +P+F KD
Sbjct: 171 XXSLHHXLPLILVGASLLHLAALHQYGSNNPLGVHSEMDKIAPYPYFYVKDLVGRVASAI 230
Query: 597 XXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
G PDN N TP HI PE YFL +AILRSIP+K GGV
Sbjct: 231 FSSXXXXXXXXXXGHPDNXXXXNXXPTPPHIVPEWYFLPIHAILRSIPDKSGGV 284
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 115 bits (276), Expect = 2e-24
Identities = 81/242 (33%), Positives = 111/242 (45%), Gaps = 19/242 (7%)
Frame = +3
Query: 90 ICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXX 263
I R+V +G +IR +H+ GAS FFI +YLH+ RG+ Y S + V +
Sbjct: 83 IMRDVEWGWLIRYMHSTGASLFFIGVYLHMFRGLIYGSGKKPRELVWVLGMLMYVVLMVE 142
Query: 264 XXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXX 443
YVLP GQ+SFWGA VI +L AIP +G L I G + + TL RF+
Sbjct: 143 AFVGYVLPWGQVSFWGAKVIISLFGAIPVIGNGLDEWIMGDYLPSDVTLNRFFALHVIAL 202
Query: 444 XXXXXXXXXXXXXXXQ-TGSNNPLGLN-------------RNLDKIPFHPFFTFKDXXXX 581
+ GSNNP G++ ++ D IPFHP++T K+
Sbjct: 203 PLLLGFLVVLHLVALRGVGSNNPDGIDIHQGPKGNRWDSMQSADSIPFHPYYTLKEMVAV 262
Query: 582 XXXXXXXXXXXXXNPYLLG---DPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLG 752
P G + NF ANPL+TP ++P YF YA+LR +P K
Sbjct: 263 CVLLLLAAFVIFFAPEFGGLFLEYGNFVEANPLMTPEDMKPVWYFAPYYAMLRLVPGKSV 322
Query: 753 GV 758
GV
Sbjct: 323 GV 324
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 108 bits (260), Expect = 2e-22
Identities = 58/134 (43%), Positives = 72/134 (53%)
Frame = +3
Query: 291 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 470
GQ+ FWGATVITN LS IPY G +VN I GGF+V + TLTRFYT
Sbjct: 5 GQMGFWGATVITNFLSVIPYYGGDIVNWIWGGFSVGSPTLTRFYTFHFLFPFLIIVFSLV 64
Query: 471 XXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDN 650
+TGS+NPL L+ + K+ F P+ KD P + GDP+N
Sbjct: 65 HLVFLHRTGSSNPLKLSSSSLKMSFWPYSGVKDMLGFLLVFLLFFFVVLFLPTVFGDPEN 124
Query: 651 FTPANPLVTPVHIQ 692
F ANP+VTPVHI+
Sbjct: 125 FMKANPMVTPVHIK 138
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 108 bits (259), Expect = 2e-22
Identities = 80/242 (33%), Positives = 107/242 (44%), Gaps = 19/242 (7%)
Frame = +3
Query: 63 EIAFYRVNY-ICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXX 233
++AF VNY I + V +G + R +HA AS F+ IY+H+ GIYY S+ + + +
Sbjct: 70 KLAFDSVNYTIMQEVWFGWLWRHMHAVAASVVFLVIYIHMFTGIYYASYKRGREMIWISG 129
Query: 234 XXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLT 413
Y+LP GQ+S+W A VITNL IP++G LV I G F V + TLT
Sbjct: 130 MLLFVTFSAEAFSGYMLPWGQMSYWAAQVITNLFGGIPFIGDDLVVWIRGNFYVSDPTLT 189
Query: 414 RFYTXXXXXXXXXXXXXXXXXXXXXQTGS-NNPLG---------------LNRNLDKIPF 545
RF+ + NN G L + IPF
Sbjct: 190 RFFMLHVLLMPLIIMAIIGLHFYTLRIPHVNNQDGEEIDFDAEAEKYKAGLKKESKVIPF 249
Query: 546 HPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAI 725
P F KD + DP NF PANP+ TP HI PE YFL++Y +
Sbjct: 250 WPVFLSKDFFVLGVFMIFYFYLVFYHYDFAMDPINFDPANPMKTPPHIYPEWYFLWSYEV 309
Query: 726 LR 731
LR
Sbjct: 310 LR 311
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 106 bits (255), Expect = 7e-22
Identities = 56/117 (47%), Positives = 72/117 (61%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
++ +T + +AF V +I R+V YG +++ HA GAS FFICIY HI RG+YY S+ K
Sbjct: 44 AIHYTADV-NLAFSSVVHIMRDVPYGWMMQNTHAIGASLFFICIYTHIARGLYYGSYMNK 102
Query: 216 YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GG 386
V L YVLP GQ+SFW ATVITNLL+AIPYLGT + + GG
Sbjct: 103 EVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTTMTXWLWGG 159
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 105 bits (253), Expect = 1e-21
Identities = 72/235 (30%), Positives = 99/235 (42%), Gaps = 4/235 (1%)
Frame = +3
Query: 66 IAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKY--V*LXXXX 239
+AF + +I R+V +G ++R H+ GAS FF YLHI R +YY + Y + +
Sbjct: 59 LAFDSIIHIMRSVRHGELVRNAHSIGASLFFFACYLHIFRAMYYNVYRKPYLKMWMISVT 118
Query: 240 XXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRF 419
Y L GQ S+W ATVIT AIP++G L + + GG+A TL RF
Sbjct: 119 LYVLLMITAFLGYSLIWGQKSYWAATVITGFTRAIPWVGDTLYSFLVGGYAPGTPTLGRF 178
Query: 420 YTXXXXXXXXXXXXXXXXXXXXXQTGSN--NPLGLNRNLDKIPFHPFFTFKDXXXXXXXX 593
Y + K+ F T D
Sbjct: 179 YVLHFIIPFVIVGGTIWHIRTVQSAFAQAMKKTFTQSESRKLFFDYKITDSDAIKLTLFM 238
Query: 594 XXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
P+ L DNF PA+P VTP + PE YFL ++ILR PN+L G+
Sbjct: 239 MLFAWFLFFAPHYLSSADNFIPADPTVTPAVVAPEWYFLPFFSILRCFPNELLGI 293
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 100 bits (240), Expect = 4e-20
Identities = 71/245 (28%), Positives = 106/245 (43%), Gaps = 15/245 (6%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
AF V I + +G +IR +H +G S FI +Y H+ RG+ Y S + V +
Sbjct: 66 AFASVQGIMYDTKWGWLIRYMHVDGVSLIFILLYTHMFRGLLYGSHRAPRELVWVIGYVI 125
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
YVLP G +S+W VIT+++ A+P +G L GG + +ATL R
Sbjct: 126 YLLMMAEAFVGYVLPFGNLSYWAGEVITSIMHALPVVGPSLTTLTRGGPGIGSATLQRLL 185
Query: 423 T-XXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLN---------RNLDKIPFHPFFTFKDX 572
+ GSNNP G++ + LD +PFHP++T KD
Sbjct: 186 ALHVVLFFLIILAAIALHIVALHRVGSNNPDGIDIKKHKGPDGKPLDGVPFHPYYTVKDL 245
Query: 573 XXXXXXXXXXXXXXXXNPYLLG---DPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPN 743
P + G + F ANP+V+ + P Y YA+LR++PN
Sbjct: 246 FGVGVWLTIFVSVIFYAPTMHGVFMERTTFLAANPMVSLPDVTPPWYLSPYYAMLRAVPN 305
Query: 744 KLGGV 758
K G+
Sbjct: 306 KYYGI 310
>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
402|Rep: Cytochrome b - Sycoscapter sp. 402
Length = 157
Score = 100 bits (240), Expect = 4e-20
Identities = 51/120 (42%), Positives = 68/120 (56%)
Frame = +3
Query: 285 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXX 464
P GQ+SFWGATVITNL+SAI Y+G +V + GGF+V +ATL RFYT
Sbjct: 2 PWGQMSFWGATVITNLVSAISYVGESVVLWMWGGFSVSDATLNRFYTFHFISDFVILFLV 61
Query: 465 XXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDP 644
QTGS NP+GLN N++KIPF+P+++ +D +PY+L P
Sbjct: 62 LIHLVFLHQTGSTNPMGLNSNMNKIPFNPYYSIQDLLGFIILIISFILICFLSPYILPIP 121
>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
sebastis|Rep: Cytochrome b - Microcotyle sebastis
Length = 386
Score = 100 bits (239), Expect = 6e-20
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Frame = +3
Query: 117 IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXX-YVLP*G 293
++R +H GAS FIC+ HIGRG+YY S++ V Y+LP
Sbjct: 90 LLRFMHLWGASLVFICLLGHIGRGLYYCSYSKNPVLWSFGMILYVVILIEAFLGYLLPWH 149
Query: 294 QISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXX 473
Q+S+W VI+ + ++P +G L + + G + + +R +
Sbjct: 150 QMSYWAGVVISTIFLSLPVIGPHLYSFLLGSYDFGDGIXSRVFCVHVCFGFVIIALIVLH 209
Query: 474 XXXXXQTGSNNPLGLNRNL-DKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDN 650
+ GS+N + D I FH + +KD +P+ +N
Sbjct: 210 LVNLHKIGSSNSFNSGDSYSDVIFFHXGYGYKDVLLFLSVXLVTLLFSCYSPWFTSLKEN 269
Query: 651 FTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
F NPL TP +I+PE YFL YA+LRSI NK+GG+
Sbjct: 270 FITPNPLATPXNIKPEWYFLPFYALLRSIENKIGGL 305
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 99.1 bits (236), Expect = 1e-19
Identities = 56/131 (42%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Frame = +3
Query: 12 ITXLTIGNSLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 191
+T +T+ ++ +T + E AF V +I R+VN G ++R LH+N AS FF +YLHIGRG+
Sbjct: 45 VTGVTL--AMHYTPSVSE-AFNSVEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHIGRGL 101
Query: 192 YYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 365
YY S+ YVLP GQ+S WGATVITNL+SAIP++G +
Sbjct: 102 YYGSYKTPRTLTWAIGTVILIVMMATAFLGYVLPYGQMSLWGATVITNLMSAIPWIGQDI 161
Query: 366 VN*I*GGFAVD 398
V I GG D
Sbjct: 162 VEFIWGGLYTD 172
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 97.5 bits (232), Expect = 4e-19
Identities = 68/234 (29%), Positives = 97/234 (41%), Gaps = 2/234 (0%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXX 242
E AF ++ + +G +R H+ G SF+F +++HI +G++Y S + +
Sbjct: 50 EGAFESLSRLVTETQFGWFVRLYHSVGVSFYFFFMFIHIIKGMWYSSKYMPWSWYSGIVI 109
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
YVLP GQ+SFWGATVI+NLL I GGF V TL RF+
Sbjct: 110 LILSIVIAFTGYVLPDGQMSFWGATVISNLLEWFGKAKVITF----GGFTVGPETLKRFF 165
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXX 602
+ GS+NPL L + + F+ F D
Sbjct: 166 ILHFVLPAVVLVIVLLHLYFLHREGSSNPLTLAEAVALLKFYQLILFSDVKFLVIISMFI 225
Query: 603 XXXXXXNPYLL--GDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
+ L D DN ++ TP HI PE Y L YA L+ P K+ G+
Sbjct: 226 GPQVGYGIWTLFQADNDNSILSSSENTPAHIIPEWYLLLFYATLKVFPTKVSGL 279
>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
Cytochrome b - Aquifex aeolicus
Length = 409
Score = 93.1 bits (221), Expect = 9e-18
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 18/223 (8%)
Frame = +3
Query: 141 GASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 314
GA+FF +YLH+ GIYY ++ + V + Y+LP GQ+S+WG
Sbjct: 93 GANFFMAIVYLHMFTGIYYNAYKRPRELVWIVGWLIYFVLILTALSGYLLPWGQLSYWGF 152
Query: 315 TVITNL---LSAIPYLGTI-------LVN*I*GGFAVDNATLTR-FYTXXXXXXXXXXXX 461
V T + L+ P L I +V + GG+ V + TL R F +
Sbjct: 153 IVTTEIPGSLADAPILKPIFKAIAETIVLWMKGGYVVTDVTLGRVFGSHVLIYPLILLAL 212
Query: 462 XXXXXXXXXQTGSNNPLGLN----RNLDK-IPFHPFFTFKDXXXXXXXXXXXXXXXXXNP 626
G +NP G+ +N DK +PFHP+ T K+ +
Sbjct: 213 VGIHLYLVRAAGISNPEGIEYDKKKNPDKFVPFHPYMTLKEGAYVMWYLAVFFFFVFFHI 272
Query: 627 YLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGG 755
P+NF PANPL TP HI PE Y L Y + RSIP+K G
Sbjct: 273 SHFLPPENFEPANPLKTPAHIAPEWYLLGYYEVFRSIPSKFWG 315
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 93.1 bits (221), Expect = 9e-18
Identities = 53/125 (42%), Positives = 74/125 (59%)
Frame = +3
Query: 12 ITXLTIGNSLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 191
+T +T+ ++ + + E AF + +I R+VN G +IR LH+N AS FF +YLHIGRG+
Sbjct: 45 VTGVTL--AMHYNPSVAE-AFNSIEHIMRDVNNGWLIRYLHSNTASAFFFLVYLHIGRGL 101
Query: 192 YYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN 371
YY S+ YVLP GQ+S WGATVITNL+SAIP++G +V
Sbjct: 102 YYASYR------------APRTLAWVSLYVLPYGQMSLWGATVITNLISAIPWIGQDIVE 149
Query: 372 *I*GG 386
+ GG
Sbjct: 150 FVWGG 154
Score = 86.6 bits (205), Expect = 7e-16
Identities = 50/124 (40%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +3
Query: 390 AVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT-GSNNPLGLNRNLDKIPFHPFFTFK 566
+V+NATL RF+ T G++NPLG+ D+IPF P+F FK
Sbjct: 208 SVNNATLNRFFALHFVLPFVLAALALMHLIAVHDTAGASNPLGVPGYYDRIPFAPYFLFK 267
Query: 567 DXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNK 746
D P +LGD +N+ ANP+ TP I PE Y L YAILRSIPNK
Sbjct: 268 DLVTIFIFLFGLSLFVFFMPNVLGDSENYVMANPMQTPAAIVPEWYLLPFYAILRSIPNK 327
Query: 747 LGGV 758
L GV
Sbjct: 328 LLGV 331
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 93.1 bits (221), Expect = 9e-18
Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*L--XXX 236
E+AF V +I R+V+ G I+R LHANGASFFF+ +++H+ +G+YY S+ V L
Sbjct: 59 ELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGV 118
Query: 237 XXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDN 401
Y GQ+S WGATVITNL SAIP++G +V+ + GGF +++
Sbjct: 119 IIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFNMED 173
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 90.2 bits (214), Expect = 6e-17
Identities = 73/248 (29%), Positives = 99/248 (39%), Gaps = 18/248 (7%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
AF V I +V +G +IR HA G++ + LH+ ++ S+ + L
Sbjct: 69 AFRSVTAIMNDVPFGWLIRMCHAVGSNMMVAVLLLHMLSVLFMGSYKRPRELNWLTGFIL 128
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y+LP Q+SFW TV TN AIP +G LV + GG V TL RF+
Sbjct: 129 FNLVLGISLTGYLLPWSQLSFWATTVATNSAGAIPVIGGYLVEFLRGGKLVGPPTLGRFF 188
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQT--GSNNPLGL--------------NRNLDKIPFHPF 554
+ S P GL + D IPF+P
Sbjct: 189 AVHVALLPLLIAALIGAHLFLLERIGVSAPPFGLANTRTRWAGDRFRHESHPDGIPFYPT 248
Query: 555 FTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRS 734
+ +D NPYL P F PA+P TP HI+PE YFL Y L+
Sbjct: 249 YLLQDATSIFIYLALFFGVVFFNPYLFFPPTAFIPADPFKTPPHIKPEWYFLANYQTLKV 308
Query: 735 IPNKLGGV 758
PN+L G+
Sbjct: 309 FPNELLGL 316
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 81.4 bits (192), Expect = 3e-14
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
++ +T I AF V +ICR+VNYG +IR +HANGASFFFICIY HIGRG+YY S+ K
Sbjct: 52 AMHYTSDI-STAFSSVTHICRDVNYGWLIRNMHANGASFFFICIYFHIGRGLYYGSYLYK 110
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +3
Query: 657 PANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
PANPLVTP HI+PE YFLFAYAILRSIPNKLGGV
Sbjct: 135 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGV 168
>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
(redback poison frog)
Length = 109
Score = 78.6 bits (185), Expect = 2e-13
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +3
Query: 81 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESF 206
V +ICR+VNYG ++R LHANGASFFFICIYLHIGRG+YY SF
Sbjct: 50 VAHICRDVNYGWLLRNLHANGASFFFICIYLHIGRGMYYGSF 91
>UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum
lineare|Rep: Cytochrome b - Microstomum lineare
Length = 234
Score = 78.6 bits (185), Expect = 2e-13
Identities = 52/148 (35%), Positives = 67/148 (45%)
Frame = +3
Query: 315 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 494
+V TN LS +PYLG L+ I GG V ++ RF++ +
Sbjct: 3 SVXTNFLSTLPYLGVFLLYSIWGGLNVCEISVYRFFSLHFIMPFVLVVLSIIHMAMLHVS 62
Query: 495 GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLV 674
S+NPL +N N D + F P+F KD PYL D NF A+
Sbjct: 63 VSSNPLHIN-NKDFLSFFPYFWSKDIVGFFLMFIFVLWLLTFFPYLFCDAANFMEASFSE 121
Query: 675 TPVHIQPE*YFLFAYAILRSIPNKLGGV 758
TP HI+PE YFL YAILR+ K GV
Sbjct: 122 TPEHIKPEWYFLPFYAILRAFATKSSGV 149
>UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep:
Cytochrome b - Antonina pretiosa
Length = 211
Score = 78.2 bits (184), Expect = 3e-13
Identities = 39/87 (44%), Positives = 49/87 (56%)
Frame = +3
Query: 498 SNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVT 677
S+NPLG+N N+D I +P+ KD P LL + DNF N +T
Sbjct: 38 SSNPLGMNNNIDLITLNPYSIMKDMIMLILNMMMFLNLNFYLPMLLNNFDNFNEMNYFIT 97
Query: 678 PVHIQPE*YFLFAYAILRSIPNKLGGV 758
P HI+PE YFLF Y+ILRSI NKL G+
Sbjct: 98 PNHIEPEWYFLFFYSILRSINNKLSGL 124
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 77.4 bits (182), Expect = 5e-13
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Frame = +3
Query: 9 FITXLT-IGNSLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 185
FI LT + + R++ +I A+Y + +I R + G R +HA GAS F YLHI R
Sbjct: 203 FIQILTGVFLASRYSPEI-SYAYYSIQHILRELWSGWCFRYMHATGASLVFFLTYLHILR 261
Query: 186 GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 353
G+ Y L + YVLP GQ+S+WGATVITNLLS IP L
Sbjct: 262 GLNYSYLYLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSGIPAL 317
>UniRef50_O21345 Cluster: Apocytochrome b; n=1; Euhadra
herklotsi|Rep: Apocytochrome b - Euhadra herklotsi
Length = 139
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +3
Query: 624 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
P + DP+NF AN +VTP+HIQPE YFLFAYAILRS+P+KLGGV
Sbjct: 9 PNMFTDPENFLEANSMVTPIHIQPEWYFLFAYAILRSVPSKLGGV 53
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 74.5 bits (175), Expect = 3e-12
Identities = 50/124 (40%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +3
Query: 54 QIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXX 233
Q A+Y V +I R + G R +HA GASF FI YLHI RG+ Y L +
Sbjct: 52 QKLSYAYYSVQHILRAIMDGWCFRYMHATGASFVFILTYLHILRGLNYSYSYLPLSWISG 111
Query: 234 XXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL-GTILVN*I*GGFAVDNATL 410
YVLP GQ+SFW TVITNLL YL T ++ GG+ V + TL
Sbjct: 112 LMIFLISIVTAFYGYVLPWGQMSFWNTTVITNLL----YLFRTCFMD--CGGYLVSDPTL 165
Query: 411 TRFY 422
RF+
Sbjct: 166 KRFF 169
Score = 46.4 bits (105), Expect = 0.001
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 633 LGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
L PDN + TP+HI PE YFL YA+L++IPNK G+
Sbjct: 189 LSHPDNAITVDRYATPLHIVPEWYFLPFYAMLKTIPNKTAGL 230
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 73.7 bits (173), Expect = 6e-12
Identities = 74/210 (35%), Positives = 93/210 (44%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXX 248
AF V YI VNYG I R H NGAS FF+ +YLHI +G++ S+ LK
Sbjct: 2 AFNVVXYIMYEVNYGWIFRIFHFNGASLFFVFLYLHIFKGLFMMSYRLKKXXASGLXXXX 61
Query: 249 XXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTX 428
V + GF V +ATL F+
Sbjct: 62 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMWVWSGFGVSSATLKFFFVX 121
Query: 429 XXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXX 608
TGS + + + D I F P + KD
Sbjct: 122 HFLVPWGLLLXVMFHXIFXHSTGSTSSMYCXGDYDXICFGPDYWNKDMYNLIFWFLFLGF 181
Query: 609 XXXXNPYLLGDPDNFTPANPLVTPVHIQPE 698
P+ LGDP+ F A+P+++PVHI PE
Sbjct: 182 SLFY-PFSLGDPEMFIEADPMMSPVHIVPE 210
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 72.9 bits (171), Expect = 1e-11
Identities = 30/49 (61%), Positives = 38/49 (77%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 215
AF + +ICR+VNYG +IR HANGAS FFIC+Y+HI RG+YY S+ K
Sbjct: 62 AFSSIAHICRDVNYGWVIRYTHANGASMFFICLYIHIARGLYYGSYLFK 110
Score = 43.2 bits (97), Expect = 0.009
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 702 YFLFAYAILRSIPNKLGGV 758
YFLFAYAILRSIPNKLGGV
Sbjct: 273 YFLFAYAILRSIPNKLGGV 291
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 72.1 bits (169), Expect = 2e-11
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = +3
Query: 36 SLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESF 206
++ +T + ++AF V +I R+VNYG +IR LHAN ASFFFI +YLHIGRG+YY S+
Sbjct: 51 AMHYTPSV-DLAFISVEHIMRDVNYGWLIRYLHANTASFFFIFVYLHIGRGLYYGSY 106
>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
Length = 108
Score = 70.1 bits (164), Expect = 7e-11
Identities = 34/61 (55%), Positives = 37/61 (60%)
Frame = +3
Query: 129 LHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFW 308
LHANGASFFFICIYLHIGRG+YY S+ K YVLP GQ+SFW
Sbjct: 48 LHANGASFFFICIYLHIGRGLYYGSYMNKETWNVGIILLLMLMATAFVGYVLPWGQMSFW 107
Query: 309 G 311
G
Sbjct: 108 G 108
>UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_110, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 184
Score = 69.3 bits (162), Expect = 1e-10
Identities = 50/147 (34%), Positives = 67/147 (45%)
Frame = +3
Query: 297 ISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXX 476
+SFWGAT T + Y + + G F D ATL F++
Sbjct: 1 MSFWGATHHTY---SRRYHNDLAL----GWFLYD-ATLNYFFSLHHLLSFVLVGDILFHL 52
Query: 477 XXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFT 656
Q GSNNPLG++ LDKI F+P+ K+ P +LG +N+
Sbjct: 53 VALHQYGSNNPLGVHLELDKISFYPYCFVKNLVGQVAYVIFSFIWIFYAPNVLGHLNNYI 112
Query: 657 PANPLVTPVHIQPE*YFLFAYAILRSI 737
P N ++TP HI PE YFL +AIL SI
Sbjct: 113 PTNLMLTPPHIMPEWYFLPIHAILPSI 139
>UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep:
Cytochrome oxidase B - Pyura haustor
Length = 137
Score = 65.3 bits (152), Expect = 2e-09
Identities = 44/127 (34%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Frame = +3
Query: 303 FWGA-----TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXX 467
FWG +VI NLL+ IP++G VN GGF V ATLTRFYT
Sbjct: 2 FWGQGGFEESVIPNLLNPIPFIGGDTVNWAWGGFFVGGATLTRFYTFHFLFPFILVVLSM 61
Query: 468 XXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPD 647
+ GS+NPL N K+ F P+ KD P LL DP+
Sbjct: 62 LHLVFLHEGGSSNPLKGTNNSFKVWFWPYNGVKDMFGLLFILIGLVFVVFFFPNLLTDPE 121
Query: 648 NFTPANP 668
N+ NP
Sbjct: 122 NYMSENP 128
>UniRef50_Q76CU5 Cluster: Cytochrome b; n=1; Galaxea
fascicularis|Rep: Cytochrome b - Galaxea fascicularis
Length = 137
Score = 64.9 bits (151), Expect = 3e-09
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +3
Query: 660 ANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
AN LVTPVHIQPE YFLFAYAILRSIPNK GGV
Sbjct: 8 ANSLVTPVHIQPEWYFLFAYAILRSIPNKFGGV 40
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*L--XXX 236
E+AF V +I R+V+ G I+R LHANGASFFF+ +++H+ +G+YY S+ V L
Sbjct: 59 ELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGV 118
Query: 237 XXXXXXXXXXXXXYVLP*GQISFWG 311
Y GQ+S WG
Sbjct: 119 IIFILTIATAFLGYCCVYGQMSHWG 143
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 60.9 bits (141), Expect = 4e-08
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +3
Query: 12 ITXLTIGNSLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 191
+T +T+ ++ ++ + E AF + +I R+VN G ++R LH+N AS FF +YLHIGRG+
Sbjct: 45 VTGVTL--AMHYSPNVLE-AFNSIEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHIGRGM 101
Query: 192 YYESF 206
YY S+
Sbjct: 102 YYGSY 106
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 60.9 bits (141), Expect = 4e-08
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
AF V YI N+G +IR++H AS + + LH+ R F + +
Sbjct: 65 AFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVL 124
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y LP QI +W ++T + AIP +G+ LV + G +V +TLTRFY
Sbjct: 125 GVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFY 184
Query: 423 T 425
+
Sbjct: 185 S 185
>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 115
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +2
Query: 89 YLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCF 268
Y P+ KL L+ S WS +L T+R+R LL + + + +Y Y ++N F
Sbjct: 26 YHPRRKLRLDYSLSPRQWSLYALHLPFPTHRSRPLLWLISPSRNLKHRHYTPSYNHNNSF 85
Query: 269 HRLCLTLRSNIFLGGNRNYKSIICNPLFRN 358
H L +R NI LG N N+K I NP++RN
Sbjct: 86 HGLRSPMRPNIILGSNSNHKPTISNPVYRN 115
>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
b gene - Chlamydomonas smithii
Length = 374
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYES 203
+ AF V ++ +V G I+R HANGAS FFI +YLH+ RG+YY S
Sbjct: 59 DYAFASVQHLMTDVPSGMILRYAHANGASLFFIVVYLHVLRGMYYGS 105
>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
Cytochrome b - Ovis aries (Sheep)
Length = 113
Score = 51.2 bits (117), Expect = 3e-05
Identities = 33/81 (40%), Positives = 42/81 (51%)
Frame = +2
Query: 65 NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL*IF*LKICMINWNYNF 244
NS L +LP+ KLWLN T FYL ++ RTR +L I L M + +
Sbjct: 32 NSILLCNPHLPRRKLWLNYPIYTRKRGINIFYLPIYACRTRPILWIIYLPRNMKHRSNPP 91
Query: 245 IYTNSNCFHRLCLTLRSNIFL 307
I NS+ HRLC T+R NI L
Sbjct: 92 ICDNSHSIHRLCFTMRPNIXL 112
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 50.8 bits (116), Expect = 5e-05
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFN--LKYV*LXXX 236
E AF V I V +G IR+LH A+ + ++LH+ R Y SF + L
Sbjct: 61 EAAFASVQMITNEVRFGATIRSLHHWAANLMILLVFLHMLRVYYTGSFKKPRELNWLAGC 120
Query: 237 XXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTR 416
Y+LP Q+S+W + + ++P +G + + GG V L+R
Sbjct: 121 FLLVLSLGLAFTGYLLPYEQLSYWASVIGAETAGSLPVVGATMKIMMQGGIKVTAEMLSR 180
Query: 417 FY 422
FY
Sbjct: 181 FY 182
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
A+ + I +V G ++R +H GA F + LH+ R + S+ +++
Sbjct: 106 AYATMTQIMNDVPLGGLMRNVHRLGAHFMVAVVILHMLRTYFTASYKAPRQFIWFTGMIL 165
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y+LP Q++FW T+ +++ A P +G + + GG + L RFY
Sbjct: 166 LFMTLLLSFSGYLLPWDQLAFWAVTIGSSMADAAPGVGPAIGRLLRGGAEIGAGALLRFY 225
>UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Rep:
Cytochrome b6 - Halobacterium salinarium (Halobacterium
halobium)
Length = 270
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Frame = +3
Query: 66 IAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR----GIYYESFNLKYV*LXX 233
+A+ V I ++N+G +R+LH A ++LH+ R G Y E + + L
Sbjct: 119 VAYCAVAGIMTDLNFGFFLRSLHRWAAQVMTAAVFLHMLRVYFTGSYKEPREVNW--LIG 176
Query: 234 XXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLT 413
Y+LP Q+++W + + +IP +G + + GGF++ ATL
Sbjct: 177 IVLLSLTMVFGYTGYLLPWDQLAYWAGQIGVEMSLSIPLVGDWVAQLMFGGFSLGQATLQ 236
Query: 414 RFY 422
R Y
Sbjct: 237 RMY 239
>UniRef50_Q9L597 Cluster: Subunit IV; n=2; Heliobacteriaceae|Rep:
Subunit IV - Heliobacterium gestii
Length = 133
Score = 47.6 bits (108), Expect = 4e-04
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 657 PANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
PA+ LVTP+ ++PE Y+L+AY IL +PNKL G+
Sbjct: 45 PADKLVTPIGLKPEWYYLWAYVILEKVPNKLMGI 78
>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
Anaeromyxobacter sp. Fw109-5
Length = 448
Score = 47.2 bits (107), Expect = 6e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 276 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y+LP Q+++W TV TN+ SA+P +G + + GG +D TL RFY
Sbjct: 169 YLLPWDQLAYWAVTVGTNIASAVPLVGAEVRELLLGGRNIDQPTLIRFY 217
>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
Cytochrome b - Eulemur mongoz (Mongoose lemur)
Length = 59
Score = 47.2 bits (107), Expect = 6e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3
Query: 138 NGASFFFICIYLHIGRGIYYESFNL 212
NGAS FF+C+++HIGRG+YY SF L
Sbjct: 21 NGASMFFLCLFIHIGRGLYYGSFTL 45
>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
Cytochrome b - Meloidogyne hapla (Root-knot nematode
worm)
Length = 132
Score = 47.2 bits (107), Expect = 6e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV 221
+F + Y+ VN G +IR +H N SFFF+ ++LHI + +++ S+ LK V
Sbjct: 58 SFNSIQYLMIEVNKGWLIRLIHFNLVSFFFMMLFLHILKALFFFSYRLKMV 108
>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
cytochrome b subunit - Chlorobium tepidum
Length = 428
Score = 47.2 bits (107), Expect = 6e-04
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 9/230 (3%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFN--LKYV*LXXXXX 242
AF +I V +G +IR +HA A+ + +++H+ + +S+ + + +
Sbjct: 138 AFSSFLFIQGQVPFGWLIRQIHAWSANLMILMLFIHMFSTFFMKSYRKPRELLWVSGFIL 197
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y+LP +++F+ V T + P G LV + GG V TLTR +
Sbjct: 198 LVLTLGFGFTGYLLPWNELAFFATQVGTEVPKVAPG-GAFLVEILRGGPDVSGETLTRMF 256
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQT-GSNNPL-----GLNRNLDKIPFHPFFTFKDXXXXX 584
+ Q G++ P+ GL + DK F P F KD
Sbjct: 257 SLHVVLLPGLVMLVLAAHLTLVQVLGTSAPIGYKEAGLIKGYDK--FFPTFLAKDGIGWL 314
Query: 585 XXXXXXXXXXXXNPYLLGDPDNFTPANPL-VTPVHIQPE*YFLFAYAILR 731
P+ +G ANPL PV I+PE YF + +L+
Sbjct: 315 IGFALLVYLAVMFPWEIG-----VKANPLSPAPVGIKPEWYFWAQFQLLK 359
>UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;
Symbiobacterium thermophilum|Rep: Menaquinol-cytochrome
C reductase - Symbiobacterium thermophilum
Length = 258
Score = 46.4 bits (105), Expect = 0.001
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 99 NVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXX 272
+V +G R LH A I ++LH+ R Y S+ ++ +
Sbjct: 97 DVIFGPFARNLHRWAAHGMVIAVWLHMTRVFYTGSYKPPREFNWVIGVALFLITVLLSFT 156
Query: 273 XYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 425
Y+LP Q+++W V +N+ P +GT + + G+ + ATL R+YT
Sbjct: 157 GYLLPWDQLAYWAIQVGSNMAKVTPVIGTYVQRALLDGYDIGPATLVRWYT 207
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 46.4 bits (105), Expect = 0.001
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Frame = +3
Query: 9 FITXLTIGNSLRFTQQIFEIAFYR-VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 185
+IT + G L F ++ +R + Y+ +V +G ++R +H GA I + LH+ R
Sbjct: 81 YITLVFTGTLLMFYYHPSKVVAFRDILYLESDVPFGKLLRNMHRWGAHLMVIMVELHMFR 140
Query: 186 GIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 356
S+ ++ + Y+LP Q+ FW TV TN+ A P LG
Sbjct: 141 VFLTGSYKKPREFNWVVGVLLLVLTLLLSFTGYLLPDDQLGFWAVTVGTNMARATPLLG 199
>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
javanica|Rep: Cytochrome b - Meloidogyne javanica
(Root-knot nematode worm)
Length = 113
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 45 FTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV 221
F + +F + Y+ VN G +IR +H N S FF+ + LH+ + ++Y SF LK V
Sbjct: 50 FYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLFFMLVMLHMLKALFYFSFRLKKV 108
>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
Cytochrome b - Trypanoplasma borreli
Length = 372
Score = 45.6 bits (103), Expect = 0.002
Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 11/227 (4%)
Frame = +3
Query: 111 G*IIRTLHANGASFFFICIYLHIGRGIY----YESFNLKYV*LXXXXXXXXXXXXXXXXY 278
G IIR+LH S + +Y+HI + I+ ++S L + Y
Sbjct: 76 GFIIRSLHIIFTSLLYFLLYIHIIKVIFLCLIFDSSMLVW--FFGFLIFIFILIIAFIGY 133
Query: 279 VLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXX 458
LP +S+WG TV +N+L+ IP +G + I +++ TL + ++
Sbjct: 134 TLPCTSMSYWGLTVFSNILATIPLIGIYICQWIWCSEFINDFTLLKLHSIHIFLPFVLLF 193
Query: 459 XXXXXXXXXXQTGSNNPLGLNRNLDKIPFH--PFFTF-----KDXXXXXXXXXXXXXXXX 617
S++ L LD+ PF+ FF F +D
Sbjct: 194 LIGAHFFVLHYFLSSDGL-----LDRFPFYYERFFFFLLYYLRDLFLIINILCFLIYYIC 248
Query: 618 XNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
+ + +++ + L T I PE +FL + L+S+P+K G+
Sbjct: 249 IYWFFVFHEESWIIVDTLKTSDKILPEWFFLSFFGFLKSVPDKFMGL 295
>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 333
Score = 44.8 bits (101), Expect = 0.003
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 276 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y+LP Q+S+W T++TN+L +P +G L + GG V+ TL+ FY
Sbjct: 45 YLLPWDQLSYWAVTIMTNILEYLPLVGNNLAIIVRGGEYVNGNTLSIFY 93
>UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 545
Score = 44.4 bits (100), Expect = 0.004
Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 2/169 (1%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
A+ + YI + G ++R LH GAS + + LH+ + Y ++ + +
Sbjct: 69 AYNSLRYILTELTAGRLMRGLHHWGASMIIVVVVLHMVQVFLYGAYKKPREATWMVGVVL 128
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y+LP ++WG V T + + P +G L + G +V T RFY
Sbjct: 129 FLVTLAYGLTGYLLPWDNRAYWGTVVATKIAAQAPVVGPYLSRLLGGEGSVGVVTFARFY 188
Query: 423 TXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKD 569
+ P+ + L K F+P FKD
Sbjct: 189 GLHVLLLPPATIFLVILHVFLVRKHGVAPVPGDELLPKKQFYPAQVFKD 237
>UniRef50_Q18UP2 Cluster: Putative uncharacterized protein; n=2;
Desulfitobacterium hafniense|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain DCB-2)
Length = 131
Score = 44.0 bits (99), Expect = 0.005
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +3
Query: 657 PANPLVTPVHIQPE*YFLFAYAILRSIPNKLG 752
PANP++TP HI+P+ YF++ + +L+ +P LG
Sbjct: 48 PANPVMTPAHIEPDWYFMWLFGLLKIVPQLLG 79
>UniRef50_P56774 Cluster: Cytochrome b6-f complex subunit 4; n=247;
cellular organisms|Rep: Cytochrome b6-f complex subunit
4 - Arabidopsis thaliana (Mouse-ear cress)
Length = 160
Score = 43.6 bits (98), Expect = 0.007
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +3
Query: 657 PANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 758
PA+P TP+ I PE YF + ILR++PNKL GV
Sbjct: 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGV 98
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 43.2 bits (97), Expect = 0.009
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
A+ V YI +G +IR +H A+F I +H+ R + ++ + +
Sbjct: 77 AWNSVYYIMNEAYFGKLIRGIHYWSANFLMAVIGMHMARTFFSGAYKAPREMNWIVGVIL 136
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y+L Q FW + V + S P+LG + + + GG V ATL+RF+
Sbjct: 137 LLLVIGLAFTGYLLRWDQDGFWASVVGIKIGSYSPFLGPYITHFLLGGDVVGPATLSRFF 196
>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 250
Score = 43.2 bits (97), Expect = 0.009
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +3
Query: 117 IIRTLHANGASFFFICIYLHIGRG-----IYYESFNLKYV*LXXXXXXXXXXXXXXXXYV 281
+IR+ H S F +Y+HI I +++ L +V YV
Sbjct: 48 VIRSTHICFTSLLFFLLYIHIFIKCIVLIILFDTHILVWV--VGFVIYIFIVIIGFIGYV 105
Query: 282 LP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
LP +S+WG TV +N+L+ +P +GT L I G +++ TL + +
Sbjct: 106 LPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEYINDFTLLKLH 152
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 42.7 bits (96), Expect = 0.012
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Frame = +3
Query: 69 AFYRVNYICR----NVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LX 230
A+ VNYI ++ G +IR H GAS + + H+ + + ++ + + L
Sbjct: 71 AWDSVNYIDHLHYGTLDVGRLIRGFHYWGASIMVVLVGAHLLQVFLWGAYKRPREIMWLV 130
Query: 231 XXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATL 410
Y+LP + ++WG V TN++ +P +G +L + I GG + TL
Sbjct: 131 GVILLALTMTAAFTGYLLPWDERAYWGTIVGTNMIGLVPVVGPLLKSAIRGGSGLGALTL 190
Query: 411 TRFY 422
+ F+
Sbjct: 191 SHFF 194
>UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon
domesticum|Rep: Cytochrome b - Trichosporon domesticum
Length = 132
Score = 42.7 bits (96), Expect = 0.012
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +3
Query: 495 GSNNPLGLNRNLDKIPFHPFFTFKD 569
GS+NPLG++ N D+IP HP++ FKD
Sbjct: 2 GSSNPLGISSNSDRIPMHPYYMFKD 26
Score = 41.9 bits (94), Expect = 0.021
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3
Query: 327 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 425
N+LSAIP++G V + GGF+V+NATL RF++
Sbjct: 28 NMLSAIPWIGQDFVEFVWGGFSVNNATLNRFFS 60
Score = 37.5 bits (83), Expect = 0.45
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 624 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYA 722
P +G DN+ PANP+ TP I PE Y L YA
Sbjct: 100 PNAMGHSDNYIPANPMQTPPSIVPEWYLLPYYA 132
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 42.3 bits (95), Expect = 0.016
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = +3
Query: 63 EIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFN--LKYV*LXXX 236
E A+ V +I V G +R++H A+ I + LH R ++ ++ ++ +
Sbjct: 63 EGAYQSVMFINDEVFMGKALRSVHNIAANLMLIMVVLHFLRVVFTGAYKPPRQFNWVVGV 122
Query: 237 XXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTR 416
Y+LP Q+ +W A + T +L +IP +G L+ G + + TL R
Sbjct: 123 LLLLLVILFCFTGYLLPLDQVGYWAAIIGTKILGSIPIVGDQLLLLGQAGTKITDHTLMR 182
Query: 417 FY 422
F+
Sbjct: 183 FF 184
>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 499
Score = 42.3 bits (95), Expect = 0.016
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +3
Query: 99 NVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXX 272
+++ G IR LH G++F + +H+ + + ++ + +
Sbjct: 79 SISMGWFIRALHGWGSNFMIAVVLVHMAQVFLFGAYKYPRELTWILGVFLLLVTLAMGFT 138
Query: 273 XYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
V+ Q ++WG + +++S +P LG LV + GG + ATL+RF+
Sbjct: 139 GQVMRFDQDAYWGLGIGASIVSRVPLLGPWLVTLVLGGPIIAGATLSRFF 188
>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
Length = 665
Score = 41.5 bits (93), Expect = 0.028
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
A+ V+YI V+ G +R LH A + I +HI I + +++
Sbjct: 69 AWGSVHYIETQVDLGWFVRGLHHYTAHMMIVAIVVHIFLVIISAGYRKPKEFIYWTSLLI 128
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
LP Q +W + T + +P +G+ L + + GG N TLTR Y
Sbjct: 129 GGVIIGLTITGNPLPWDQKGYWSYQIETGIAGTMPVIGSTLRSLVVGGSEFGNLTLTRLY 188
Query: 423 T 425
T
Sbjct: 189 T 189
>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
russelli|Rep: Cytochrome b - Decapterus russelli (Indian
scad)
Length = 102
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 89 YLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL 196
+LP+CKL L +S TC W + +L+L +YR+R +L
Sbjct: 36 HLPRCKLRLTHSQHTCQWRILLLHLYLSSYRSRPIL 71
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 40.3 bits (90), Expect = 0.064
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 276 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y+LP Q +W V T L+ IP +G L + GG +ATLTRF+
Sbjct: 136 YLLPWDQKGYWATKVATTLMGLIPAIGGDLQKVVVGGTDYGHATLTRFF 184
>UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Cytochrome b/b6,
N-terminal domain - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 358
Score = 39.1 bits (87), Expect = 0.15
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
A+ V++ +V +G I+R +H + + + LH+ ++ ++V +
Sbjct: 69 AYDSVDFAQFSVPFGDIVRGVHYYAWNLLLVVLGLHLAGTFLTAAYQAPRQFVWISGVLI 128
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
+LP Q +W V +++S+IP +G + + + GG TLTRFY
Sbjct: 129 MLVVPLFIITGDLLPWDQKGYWTTQVRNSIISSIPVVGDLTLRLLQGGPRTGIVTLTRFY 188
>UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Rep:
Cytochrome b - Lyristes plebejus
Length = 132
Score = 38.7 bits (86), Expect = 0.20
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2
Query: 347 LFRNYISKLNLRGICCR*CYINPILHISFFITVHY 451
L YISKLNL ICC N IL +FF T+HY
Sbjct: 14 LIXEYISKLNLSWICCWQRNFNTILFTTFFNTLHY 48
Score = 37.9 bits (84), Expect = 0.34
Identities = 28/68 (41%), Positives = 30/68 (44%)
Frame = +3
Query: 534 KIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANPLVTPVHIQPE*YFLF 713
KIPFHP+F+ KD PYLLGDP N FLF
Sbjct: 76 KIPFHPYFSIKD-MLGFMSAVSCFWNYLLEPYLLGDPKN-----------------EFLF 117
Query: 714 AYAILRSI 737
AYAILRSI
Sbjct: 118 AYAILRSI 125
>UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula
marina DSM 3645|Rep: Apocytochrome b6 - Blastopirellula
marina DSM 3645
Length = 494
Score = 37.5 bits (83), Expect = 0.45
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
A+ + Y+ +G ++R +H A+ + + +H+ + +F + +
Sbjct: 72 AYASLEYLNYEAPFGWLLRAIHYWSATGMVVMLMVHMTQVFLMGAFKYPRELTWIVGVGL 131
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
VL S+WG +V + +P+ G +V+ I GG + + TL+RF+
Sbjct: 132 LTTTLVLAFTGQVLRYDGDSYWGVSVAVSAAGRVPFAGPSIVHLILGGEYIGSETLSRFF 191
Query: 423 T 425
T
Sbjct: 192 T 192
>UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=1; Triticum timopheevii|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Triticum timopheevi (Sanduri wheat)
Length = 207
Score = 37.5 bits (83), Expect = 0.45
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 144 ASFFFICIYLHIGRGIYYESFNLKYV 221
AS FFI +YLHI RG+YY S+ ++V
Sbjct: 23 ASMFFIVVYLHIFRGLYYASYPREFV 48
>UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 438
Score = 36.7 bits (81), Expect = 0.79
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXX 242
A+ R+ + V +G +R +H A ++LH+ R + S+ ++ +
Sbjct: 101 AYDRMLDLRGTVAFGTFLRNMHRWSAHGMVAIVFLHMCRVFFTGSYKKPREFNWVLGVVL 160
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y+LP Q++FW TV T++ P +G + + G V L RFY
Sbjct: 161 FLLTLFLSFTGYLLPWDQLAFWAITVGTSIAGYAPVVGQDIKFLLLGDATVGQEALLRFY 220
>UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Cytochrome b/b6-like
protein - Plesiocystis pacifica SIR-1
Length = 587
Score = 36.7 bits (81), Expect = 0.79
Identities = 47/218 (21%), Positives = 75/218 (34%), Gaps = 3/218 (1%)
Frame = +3
Query: 87 YICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXX 260
YI V G +R LH +G+S + LH+ + + ++ +
Sbjct: 71 YIQDQVAGGWFLRGLHHHGSSAMVVVTLLHLMQVVLAGAYRAPREVNWWTGLAMGGLVLA 130
Query: 261 XXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXX 440
Y+LP Q +W V T ++ +P G + + + GG N T+TRFY
Sbjct: 131 FALTGYLLPWDQKGYWATQVATGIMGTVPG-GEPMQHALQGGDQYGNLTITRFYALHVFV 189
Query: 441 XXXXXXXXXXXXXXXXQT-GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXX 617
+ G P L+ K PF+
Sbjct: 190 LPLTLAALLGAHLYLFRRHGVTPPAKLSEEELKAKAQPFWP-NQLFIDIAAMAVCGAILV 248
Query: 618 XNPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILR 731
Y + F PA+P V +PE YFLF + +L+
Sbjct: 249 GLTYETHGAELFAPADPASNFV-ARPEWYFLFLFQLLK 285
>UniRef50_Q7YIG0 Cluster: Cytochrome b; n=2; Otiorhynchus
scaber|Rep: Cytochrome b - Otiorhynchus scaber
Length = 94
Score = 36.3 bits (80), Expect = 1.0
Identities = 23/64 (35%), Positives = 26/64 (40%)
Frame = +3
Query: 489 QTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNFTPANP 668
Q GS+NP G N K+P P F K P L P PA P
Sbjct: 31 QPGSSNPXGXKSNFSKLPLXPXFXLKXXVGFLGLXALXPVLPXKXPXYLXGPTXXXPAXP 90
Query: 669 LVTP 680
+ P
Sbjct: 91 XLXP 94
>UniRef50_Q91096 Cluster: Cytochrome b; n=2; Malaconotidae|Rep:
Cytochrome b - Laniarius aethiopicus
Length = 98
Score = 35.5 bits (78), Expect = 1.8
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +2
Query: 89 YLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCF 268
++PK + + N TC S YLHL T+ TR LL + + + +Y NSNCF
Sbjct: 37 HMPKRTIRMTNPKPTCKRSLPILYLHLPTHWTRILLWLISKQRNLKRRSYPTPNPNSNCF 96
Query: 269 HR 274
R
Sbjct: 97 RR 98
>UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter
violaceus|Rep: Cytochrome b6 - Gloeobacter violaceus
Length = 217
Score = 35.5 bits (78), Expect = 1.8
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 2/120 (1%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFN--LKYV*LXXXXX 242
A+ I ++G +R LH +S +C +Y F K++
Sbjct: 70 AYDSTRQITYQTSFGWAVRGLHWWASSLTLVCSLAFTALAYWYGYFRGPAKWMWWTGLVM 129
Query: 243 XXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 422
Y LP Q ++W + NLL+ +P LG + + G V +A++ R +
Sbjct: 130 GLMLLGANVTGYYLPLDQNAYWRLMIEANLLADVPVLGAAVKYFLLNGSGVSDASIARIH 189
>UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus
rugulosus|Rep: Cytochrome b - Hoplobatrachus rugulosus
Length = 112
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 314 NRNYKSIICNPLFRNYISKLNLRGICCR*CYINPILHIS 430
N ++KS IC P++ + +NL + CR + N ILH+S
Sbjct: 2 NSHHKSSICGPIYWHRPRPMNLGWVFCRQRHANSILHLS 40
>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
cytochrome b subunit; n=24; Bacillaceae|Rep:
Menaquinol-cytochrome c reductase cytochrome b subunit -
Bacillus subtilis
Length = 224
Score = 34.3 bits (75), Expect = 4.2
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Frame = +3
Query: 69 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR----GIYYESFNLKYV*LXXX 236
A+ V Y+ V +G I+R +H GAS + ++LH R G Y + L ++
Sbjct: 73 AWESVYYLQNEVAFGQIVRGMHHWGASLVIVMMFLHTLRVFFQGAYKKPRELNWI--VGV 130
Query: 237 XXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNA-TLT 413
Y+LP + + V + A P +GT + + G + A TLT
Sbjct: 131 LIFFVMLGLGFTGYLLPWDMKALFATKVGLQIAEATPLIGTQVKTLLAGHPDIVGAQTLT 190
Query: 414 RFY 422
RF+
Sbjct: 191 RFF 193
>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
apomucin, partial; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to submaxillary apomucin, partial -
Monodelphis domestica
Length = 745
Score = 33.9 bits (74), Expect = 5.6
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3
Query: 343 IADNRFVITVAPQKDI*PQGKT 278
+AD R ITVAPQKDI P G T
Sbjct: 1 MADRRLAITVAPQKDICPHGNT 22
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 33.5 bits (73), Expect = 7.4
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = -3
Query: 163 QIKKNEAPLACNVRIIQP*FTFRQI*FTL*KAI--SNICCVNLKEFPIVXSVMK 8
Q+KKN+APL +R+ P FT RQ+ T KA+ S++ C+ K P+ V+K
Sbjct: 1 QMKKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCM-AKNSPVWIWVIK 53
>UniRef50_Q703H8 Cluster: Cytochrome b; n=2; Halobacteriaceae|Rep:
Cytochrome b - Halobacterium mediterranei (Haloferax
mediterranei)
Length = 485
Score = 33.5 bits (73), Expect = 7.4
Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Frame = +3
Query: 30 GNSLRFTQQIFEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR----GIYY 197
G+ +F + AF V +I ++ +G IR +H A F I LH+ R G Y
Sbjct: 80 GSVAKFQGEEVPEAFASVLHITYDIPFGMFIRRMHHWAAHLFVASIGLHMLRVFFTGAYR 139
Query: 198 ESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I 377
+V Y LP + + + NL ++IP +G ++
Sbjct: 140 NPREPNWV--VGTALAGLSMGAAYTGYALPFDEFAATATGIGYNLATSIPLVGEVIGKAF 197
Query: 378 *GGFAVDNATLTRFY 422
GG +AT+ R Y
Sbjct: 198 FGGEFPSSATIPRLY 212
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,933,266
Number of Sequences: 1657284
Number of extensions: 9136176
Number of successful extensions: 15016
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 14361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14846
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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