Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_K24
(991 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 79 4e-15
Z93383-3|CAB07625.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.2
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 30 2.2
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 30 2.9
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 29 3.9
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 29 6.8
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 6.8
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 28 8.9
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 28 8.9
AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear recep... 28 8.9
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 28 8.9
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 79.4 bits (187), Expect = 4e-15
Identities = 53/144 (36%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Frame = +1
Query: 148 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 324
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59
Query: 325 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXX 504
++L T +EK LP D + EK H L D + +F +K T T EKN L
Sbjct: 60 TKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVL----PSPT 115
Query: 505 XXXXNKFLNGIENFDPTKLKHTET 576
K L +FD + L H ET
Sbjct: 116 DVAREKTLQMAASFDKSALHHVET 139
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/87 (40%), Positives = 44/87 (50%)
Frame = +1
Query: 328 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXX 507
+LK ET EKN LP K+ VA EK H + +EHFD T++ T +EK L
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82
Query: 508 XXXNKFLNGIENFDPTKLKHTETCEKN 588
+ + I NF LK TET EKN
Sbjct: 83 KQHLELTDKINNFPSENLKKTETIEKN 109
>Z93383-3|CAB07625.1| 309|Caenorhabditis elegans Hypothetical
protein F54B8.3 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = -2
Query: 573 FRVLQLSGIEVLDAVQEFVLFLLRFDSFDRGQWILFFRR-----RVLHLSLVEVFNSVQE 409
F V+ L+ ++V A++ F ++ DR Q I +F+R LH+ VE++NS +
Sbjct: 99 FLVIALNDLKV--ALKHVSCFAYVDNTLDRYQNITYFKRFLKSEETLHVEEVEIWNSYVD 156
Query: 408 VLVGFLRC 385
++ LRC
Sbjct: 157 DVMTILRC 164
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 30.3 bits (65), Expect = 2.2
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +3
Query: 324 EPAEAHRDSGEEPASGQRRCR-SGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYR 500
EP S EP G R CR S E+ + L R+ R+ S+E H + + A D Y+
Sbjct: 50 EPHITDIPSSSEPQEGSRECRLSKEAHRKRLRRA---RETSEETH---TRLAKAAD--YK 101
Query: 501 SGEGKEQIPERHRELRSH*AEAHGNVRKEPSHKESEQNR 617
E+ E +RE AE R + S ++ R
Sbjct: 102 RKRCSEETEEEYRERLKRQAERKKMERMQESEDQANNRR 140
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.9
Identities = 26/93 (27%), Positives = 39/93 (41%)
Frame = +3
Query: 342 RDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 521
++S +EP + ++ PP R + SDE KES D GEGK+
Sbjct: 1244 KESKKEPTTEDGEVKTPSPPPAKKTRIVDRLKRSDEPSKKDEKES-PKDTESEKGEGKK- 1301
Query: 522 IPERHRELRSH*AEAHGNVRKEPSHKESEQNRD 620
R RS E R E +KE E++++
Sbjct: 1302 -----RRERSKDKETGKEKRLEKDNKEREKDKE 1329
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 388 LRQRLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQWRRL 263
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 388 LRQRLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQWRRL 263
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 28.7 bits (61), Expect = 6.8
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = +3
Query: 324 EPAEAH-RDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSY- 497
+P E R E Q+R GE P + R + D+ D+ +E P R +
Sbjct: 141 DPTEVKDRFDKEREGRKQQRGDDGEEEDHPKSQRGIQRSNEDDRKDE--EEEERPRRPHQ 198
Query: 498 RSGEGKEQIPERHRELRSH*AEAHGNVRKEPSHKESEQN 614
R G+ E E ++ R HG +EPS + +
Sbjct: 199 RRGDSYEDEEEDRKKYRPR----HGEEEEEPSREREHHH 233
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 456 DDGRKESTAPDRSYRSGEGKEQIPERHRELRSH*AEAHGNVRKEPSHK 599
+DGR++ + R GK ++PE+ E H ++HG+ P ++
Sbjct: 502 EDGREKDDFREDHGREDHGKSEVPEK-VEHEQHPPQSHGSPHPGPQYQ 548
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 333 EAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKE 473
E + E+ + R E PEPL R D DE DDG ++
Sbjct: 2493 EDEEEEAEDDDQDEDDVRHVEQNPEPLARRLFEEDDDDEEDDDGDED 2539
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 349 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 227
+S A + + C R K + +S R L EA F+WCR
Sbjct: 172 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 212
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +1
Query: 256 SAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFD 435
S K + L +E S H + ++KN D ++ E Q L+G F+
Sbjct: 367 SCNSTIEHKEAEELISHLELESSQNSIHNDNRKKNEDYDMEISEIETITQRQLEGYGTFN 426
Query: 436 KTQMKH 453
+MK+
Sbjct: 427 SPEMKN 432
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 349 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 227
+S A + + C R K + +S R L EA F+WCR
Sbjct: 172 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 212
>AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 353
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 349 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 227
+S A + + C R K + +S R L EA F+WCR
Sbjct: 88 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 128
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 83 FYPLPHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLL 262
F P+P + + + P TSP+SP + S++ P VSVTS P ++
Sbjct: 19 FSPIPKFSRLRTPRTSREYVCPLKSTSPQSPSS---STENEPPPVSVTSPPARKRALEES 75
Query: 263 KTSPLRR 283
+P+++
Sbjct: 76 TVTPIQQ 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,556,407
Number of Sequences: 27780
Number of extensions: 300847
Number of successful extensions: 1212
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2584172786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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