Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_K23
(956 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34 pro... 81 6e-15
CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein. 77 1e-13
CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein. 77 1e-13
BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34 p... 77 1e-13
BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34 p... 77 1e-13
BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34 p... 77 1e-13
AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34 p... 77 1e-13
AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34 p... 59 2e-08
BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein. 31 8.2
BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein. 31 8.2
AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein. 31 8.2
AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein. 31 8.2
>L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 81.0 bits (191), Expect = 6e-15
Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Frame = +2
Query: 146 GHRVAAWFIS-MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCH 322
G+R+ + + K+P+ + CG C KLRG++P RP RL KK V R YGG +C
Sbjct: 27 GNRIVYLYTKKVGKAPKSA--CGVCPGKLRGVRPVRPKVLMRLSKTKKHVSRAYGGSMCA 84
Query: 323 KCVKQRIVRAFLIEEQK-IVKVL 388
KCV+ RI RAFLIEEQK IVKVL
Sbjct: 85 KCVRDRIKRAFLIEEQKIIVKVL 107
Score = 64.9 bits (151), Expect = 4e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1
Query: 76 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 204
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 76.6 bits (180), Expect = 1e-13
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +2
Query: 146 GHRVAAWFIS-MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCH 322
G+R+ + + K+P+ + CG C +LRG++ RP RL KK V R YGG +C
Sbjct: 27 GNRIVYLYTKKVGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCA 84
Query: 323 KCVKQRIVRAFLIEEQKI-VKVL 388
KCV+ RI RAFLIEEQKI VKVL
Sbjct: 85 KCVRDRIKRAFLIEEQKIVVKVL 107
Score = 64.9 bits (151), Expect = 4e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1
Query: 76 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 204
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 76.6 bits (180), Expect = 1e-13
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +2
Query: 146 GHRVAAWFIS-MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCH 322
G+R+ + + K+P+ + CG C +LRG++ RP RL KK V R YGG +C
Sbjct: 27 GNRIVYLYTKKVGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCA 84
Query: 323 KCVKQRIVRAFLIEEQKI-VKVL 388
KCV+ RI RAFLIEEQKI VKVL
Sbjct: 85 KCVRDRIKRAFLIEEQKIVVKVL 107
Score = 64.9 bits (151), Expect = 4e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1
Query: 76 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 204
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 76.6 bits (180), Expect = 1e-13
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +2
Query: 146 GHRVAAWFIS-MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCH 322
G+R+ + + K+P+ + CG C +LRG++ RP RL KK V R YGG +C
Sbjct: 27 GNRIVYLYTKKVGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCA 84
Query: 323 KCVKQRIVRAFLIEEQKI-VKVL 388
KCV+ RI RAFLIEEQKI VKVL
Sbjct: 85 KCVRDRIKRAFLIEEQKIVVKVL 107
Score = 64.9 bits (151), Expect = 4e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1
Query: 76 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 204
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 76.6 bits (180), Expect = 1e-13
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +2
Query: 146 GHRVAAWFIS-MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCH 322
G+R+ + + K+P+ + CG C +LRG++ RP RL KK V R YGG +C
Sbjct: 27 GNRIVYLYTKKVGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCA 84
Query: 323 KCVKQRIVRAFLIEEQKI-VKVL 388
KCV+ RI RAFLIEEQKI VKVL
Sbjct: 85 KCVRDRIKRAFLIEEQKIVVKVL 107
Score = 64.9 bits (151), Expect = 4e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1
Query: 76 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 204
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 76.6 bits (180), Expect = 1e-13
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +2
Query: 146 GHRVAAWFIS-MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCH 322
G+R+ + + K+P+ + CG C +LRG++ RP RL KK V R YGG +C
Sbjct: 27 GNRIVYLYTKKVGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCA 84
Query: 323 KCVKQRIVRAFLIEEQKI-VKVL 388
KCV+ RI RAFLIEEQKI VKVL
Sbjct: 85 KCVRDRIKRAFLIEEQKIVVKVL 107
Score = 64.9 bits (151), Expect = 4e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1
Query: 76 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 204
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 76.6 bits (180), Expect = 1e-13
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +2
Query: 146 GHRVAAWFIS-MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCH 322
G+R+ + + K+P+ + CG C +LRG++ RP RL KK V R YGG +C
Sbjct: 27 GNRIVYLYTKKVGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCA 84
Query: 323 KCVKQRIVRAFLIEEQKI-VKVL 388
KCV+ RI RAFLIEEQKI VKVL
Sbjct: 85 KCVRDRIKRAFLIEEQKIVVKVL 107
Score = 64.9 bits (151), Expect = 4e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1
Query: 76 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 204
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34
protein.
Length = 45
Score = 59.3 bits (137), Expect = 2e-08
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1
Query: 85 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 204
RLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+
Sbjct: 1 RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 40
>BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein.
Length = 349
Score = 30.7 bits (66), Expect = 8.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 432 FVAFFADLVLACCAL--RTFTIFCSSIKKALTMRCLTHLWQRTPP 304
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein.
Length = 580
Score = 30.7 bits (66), Expect = 8.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 432 FVAFFADLVLACCAL--RTFTIFCSSIKKALTMRCLTHLWQRTPP 304
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein.
Length = 349
Score = 30.7 bits (66), Expect = 8.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 432 FVAFFADLVLACCAL--RTFTIFCSSIKKALTMRCLTHLWQRTPP 304
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein.
Length = 722
Score = 30.7 bits (66), Expect = 8.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 432 FVAFFADLVLACCAL--RTFTIFCSSIKKALTMRCLTHLWQRTPP 304
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,863,229
Number of Sequences: 237096
Number of extensions: 1438868
Number of successful extensions: 2393
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2387
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12658656216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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