Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_K13
         (926 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1190 - 28274801-28275163,28275662-28275853,28275965-282760...    31   1.7  
10_08_1055 + 22587122-22587501,22587578-22588097                       29   6.9  
06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306...    29   6.9  
04_04_1019 + 30166514-30166585,30167207-30167841,30168505-301686...    29   6.9  
02_05_0410 + 28744716-28744841,28745361-28745965,28746151-287462...    29   6.9  
01_06_0594 - 30473915-30474533,30474667-30474962                       29   6.9  

>06_03_1190 -
           28274801-28275163,28275662-28275853,28275965-28276088,
           28276177-28276320,28276524-28276640,28277189-28277308,
           28277433-28277521,28277609-28277685,28278250-28278322,
           28278578-28279012,28280247-28280442,28281270-28281490,
           28281591-28281703,28282552-28283146,28283236-28283418,
           28283548-28283712,28283808-28284029
          Length = 1142

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 641 PPASSLLRSPDPEPAAYRIPVRLISLR-ETWXLLIAH 748
           PPA   L    P PA YR+P+R    R E W   I H
Sbjct: 112 PPAHRRLNCLIPPPAGYRVPIRWPRSRDEVWKANIPH 148


>10_08_1055 + 22587122-22587501,22587578-22588097
          Length = 299

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 366 PLPRSLTRCARSSGCGXRXQLTQRR 440
           P PR   RC+ S GC  R Q+ + R
Sbjct: 169 PYPRGYYRCSSSKGCSARKQVERSR 193


>06_02_0046 +
           10928708-10928798,10929997-10930077,10930567-10930685,
           10931275-10931894,10931992-10933184,10933280-10933359,
           10933751-10933846,10933931-10934004,10936007-10936151,
           10936323-10936487
          Length = 887

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 62  PAAGGSPSXEG*XGSRHDNDT 124
           P+ GG+PS EG  G  HD  T
Sbjct: 28  PSPGGTPSKEGERGENHDQQT 48


>04_04_1019 +
           30166514-30166585,30167207-30167841,30168505-30168645,
           30169604-30170300
          Length = 514

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 366 PLPRSLTRCARSSGCGXRXQLTQRR 440
           P PR   RC+ S GC  R Q+ + R
Sbjct: 280 PYPRGYYRCSSSKGCSARKQVERSR 304


>02_05_0410 +
           28744716-28744841,28745361-28745965,28746151-28746270,
           28746597-28746737,28748626-28749370
          Length = 578

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 366 PLPRSLTRCARSSGCGXRXQLTQRR 440
           P PR   RC+ S GC  R Q+ + R
Sbjct: 328 PYPRGYYRCSSSKGCSARKQVERSR 352


>01_06_0594 - 30473915-30474533,30474667-30474962
          Length = 304

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 366 PLPRSLTRCARSSGCGXRXQLTQRR 440
           P PR+  RC+ S GC  R Q+ + R
Sbjct: 96  PFPRAYYRCSSSKGCPARKQVERSR 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,209,619
Number of Sequences: 37544
Number of extensions: 322849
Number of successful extensions: 774
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)