Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_K03
(941 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 27 0.31
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 27 0.31
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 27 0.31
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 27 0.31
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 0.90
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 1.5
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 3.9
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 26 4.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 25 4.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.8
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 25 5.2
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.4
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 28 8.4
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 28 8.4
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 8.4
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 8.4
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 25 9.4
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 27.5 bits (58), Expect(2) = 0.31
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 655 PXXKKXXPPPPPPP 614
P +K PPPPPPP
Sbjct: 258 PPREKSVPPPPPPP 271
Score = 24.2 bits (50), Expect(2) = 0.31
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -2
Query: 634 PPPPPPPXFXKXKKGXGFFSXXPXKKKKRGG 542
PPPPP P + + +K+ +GG
Sbjct: 270 PPPPPKPVSREPSRARSMTPGTRERKEVKGG 300
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 27.5 bits (58), Expect(2) = 0.31
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 655 PXXKKXXPPPPPPP 614
P +K PPPPPPP
Sbjct: 258 PPREKSVPPPPPPP 271
Score = 24.2 bits (50), Expect(2) = 0.31
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -2
Query: 634 PPPPPPPXFXKXKKGXGFFSXXPXKKKKRGG 542
PPPPP P + + +K+ +GG
Sbjct: 270 PPPPPKPVSREPSRARSMTPGTRERKEVKGG 300
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 27.5 bits (58), Expect(2) = 0.31
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 655 PXXKKXXPPPPPPP 614
P +K PPPPPPP
Sbjct: 243 PPREKSVPPPPPPP 256
Score = 24.2 bits (50), Expect(2) = 0.31
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -2
Query: 634 PPPPPPPXFXKXKKGXGFFSXXPXKKKKRGG 542
PPPPP P + + +K+ +GG
Sbjct: 255 PPPPPKPVSREPSRARSMTPGTRERKEVKGG 285
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 27.5 bits (58), Expect(2) = 0.31
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 655 PXXKKXXPPPPPPP 614
P +K PPPPPPP
Sbjct: 243 PPREKSVPPPPPPP 256
Score = 24.2 bits (50), Expect(2) = 0.31
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -2
Query: 634 PPPPPPPXFXKXKKGXGFFSXXPXKKKKRGG 542
PPPPP P + + +K+ +GG
Sbjct: 255 PPPPPKPVSREPSRARSMTPGTRERKEVKGG 285
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 750 PPPPXFXXXXXXXXXXXXXXXXXGAPPPPXXXXXXKXKXPPPPPP 616
PPPP PPPP PPPPPP
Sbjct: 770 PPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPP 814
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 750 PPPPXFXXXXXXXXXXXXXXXXXGAPPPPXXXXXXKXKXPPPPPP 616
PPPP PPPP PPPPPP
Sbjct: 771 PPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 750 PPPPXFXXXXXXXXXXXXXXXXXGAPPPPXXXXXXKXKXPPPPPP 616
PPPP PPPP PPPPPP
Sbjct: 770 PPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPP 814
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 750 PPPPXFXXXXXXXXXXXXXXXXXGAPPPPXXXXXXKXKXPPPPPP 616
PPPP PPPP PPPPPP
Sbjct: 771 PPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP K PPPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 750 PPPPXFXXXXXXXXXXXXXXXXXGAPPPPXXXXXXKXKXPPPPPP 616
PPPP PPPP PPPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 25.8 bits (54), Expect(2) = 1.1
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 504 PPPPPKXGXXKXXPP 548
PPPPP G K PP
Sbjct: 771 PPPPPPPGGFKGGPP 785
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 477 GGXXKRXGXPPPPPKXG 527
GG G PPPPP G
Sbjct: 733 GGLPPITGGPPPPPPPG 749
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP K PPPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 750 PPPPXFXXXXXXXXXXXXXXXXXGAPPPPXXXXXXKXKXPPPPPP 616
PPPP PPPP PPPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 25.8 bits (54), Expect(2) = 1.1
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 504 PPPPPKXGXXKXXPP 548
PPPPP G K PP
Sbjct: 771 PPPPPPPGGFKGGPP 785
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 477 GGXXKRXGXPPPPPKXG 527
GG G PPPPP G
Sbjct: 733 GGLPPITGGPPPPPPPG 749
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP K PPPPPP
Sbjct: 354 PPPPPPPGGFKGGPPPPPPP 373
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 750 PPPPXFXXXXXXXXXXXXXXXXXGAPPPPXXXXXXKXKXPPPPPP 616
PPPP PPPP PPPPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 25.8 bits (54), Expect(2) = 1.1
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 504 PPPPPKXGXXKXXPP 548
PPPPP G K PP
Sbjct: 354 PPPPPPPGGFKGGPP 368
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 477 GGXXKRXGXPPPPPKXG 527
GG G PPPPP G
Sbjct: 316 GGLPPITGGPPPPPPPG 332
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 678 APPPPXXXXXXKXKXPPPPP 619
APPPP K PPPPP
Sbjct: 83 APPPPPPPPPPTLKAPPPPP 102
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP + PPPPPP
Sbjct: 71 PPPPPLISILQQAPPPPPPP 90
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP + PPPPPP
Sbjct: 72 PPPPLISILQQAPPPPPPPP 91
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP + PPPPPP
Sbjct: 70 PPPPPPLISILQQAPPPPPP 89
Score = 25.0 bits (52), Expect(2) = 1.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 643 KXXPPPPPPP 614
K PPPPPPP
Sbjct: 64 KATPPPPPPP 73
Score = 24.2 bits (50), Expect(2) = 1.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 634 PPPPPPPXFXK 602
PPPPPPP K
Sbjct: 86 PPPPPPPPTLK 96
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 678 APPPPXXXXXXKXKXPPPPPP 616
APPPP PPPPPP
Sbjct: 40 APPPPPMCGCAPPPPPPPPPP 60
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 678 APPPPXXXXXXKXKXPPPPPP 616
APPPP PPPPPP
Sbjct: 233 APPPPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 678 APPPPXXXXXXKXKXPPPPPP 616
APPPP PPPPPP
Sbjct: 219 APPPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 678 APPPPXXXXXXKXKXPPPPPP 616
APPPP PPPPPP
Sbjct: 219 APPPPPLPPVGAGAPPPPPPP 239
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPP 1363
Score = 26.2 bits (55), Expect(2) = 3.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 634 PPPPPPPXFXKXKKG 590
PPPPPPP K G
Sbjct: 1357 PPPPPPPTMSKAPTG 1371
Score = 23.8 bits (49), Expect(2) = 8.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 634 PPPPPPP 614
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
Score = 22.6 bits (46), Expect(2) = 8.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 631 PPPPPPXFXKXKK 593
PPPPPP + KK
Sbjct: 1390 PPPPPPLPSEEKK 1402
Score = 21.4 bits (43), Expect(2) = 3.9
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -2
Query: 655 PXXKKXXPPPPPP 617
P PPPPPP
Sbjct: 1336 PSPPPPPPPPPPP 1348
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 25.8 bits (54), Expect(2) = 4.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 646 KKXXPPPPPPP 614
K+ PPPPPPP
Sbjct: 130 KRAAPPPPPPP 140
Score = 21.8 bits (44), Expect(2) = 4.1
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 628 PPPPPXFXKXKKGXGF 581
PPPPP K + G +
Sbjct: 180 PPPPPPHRKQENGIDY 195
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 24.6 bits (51), Expect(2) = 4.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 634 PPPPPPPXF 608
PPPPPPP +
Sbjct: 133 PPPPPPPHY 141
Score = 23.0 bits (47), Expect(2) = 4.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 655 PXXKKXXPPPPPP 617
P ++ PPPPPP
Sbjct: 127 PYQQQPPPPPPPP 139
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 750 PPPPXFXXXXXXXXXXXXXXXXXGAPPPPXXXXXXKXKXPPPPPP 616
PPPP PPPP PPPPPP
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 750 PPPPXFXXXXXXXXXXXXXXXXXGAPPPPXXXXXXKXKXPPPPPP 616
PPPP PPPP PPPPPP
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 678 APPPPXXXXXXKXKXPPPPPP 616
APPPP PPPPPP
Sbjct: 575 APPPPPPPPPMLGGPPPPPPP 595
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPP 582
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 25.4 bits (53), Expect(2) = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 655 PXXKKXXPPPPPPP 614
P + PPPPPPP
Sbjct: 353 PQPQSLVPPPPPPP 366
Score = 21.8 bits (44), Expect(2) = 5.2
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -2
Query: 634 PPPPPPPXFXKXKKG 590
PPPPPP + G
Sbjct: 365 PPPPPPSAASNGRSG 379
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 491 PPPPLPPIATPSSVPPPPPP 510
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 468 GGGGGXXKRXGXPPPPPKXG 527
GGGGG PPPPP G
Sbjct: 43 GGGGGCGGGCAPPPPPPACG 62
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 468 GGGGGXXKRXGXPPPPPKXG 527
GGGGG PPPPP G
Sbjct: 100 GGGGGCGGGCAPPPPPPACG 119
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP + PPPPPP
Sbjct: 40 PPPPPPPCGGGYEAPPPPPP 59
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 498 GXPPPPPKXGXXKXXPPLF 554
G PPPPP G PP+F
Sbjct: 93 GIPPPPPMMGGIPPPPPMF 111
Score = 25.0 bits (52), Expect(2) = 8.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 632 PPPPPPXFXXXXXXXGVFFXXPXKKKKKG 546
PPPPPP F V K+ KKG
Sbjct: 251 PPPPPPEFGFDSDKQKVTSEDIEKEIKKG 279
Score = 21.4 bits (43), Expect(2) = 8.9
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 656 PXXXKXKXPPPPPP 615
P + K PPPPP
Sbjct: 242 PIVMRQKGAPPPPP 255
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 159 PPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 159 PPPPPVSVPSSKPTPPPPPP 178
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 498 PPPPLPPIATPSSVPPPPPP 517
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 489 PPPPMPSINGHAPNPPPPPP 508
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPPP 143
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 125 PPPPRKSRAGGSSPPPPPPP 144
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 675 PPPPXXXXXXKXKXPPPPPP 616
PPPP PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 25.0 bits (52), Expect(2) = 9.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 634 PPPPPPPXFXK 602
PPPPPPP K
Sbjct: 315 PPPPPPPPLPK 325
Score = 21.4 bits (43), Expect(2) = 9.4
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -2
Query: 655 PXXKKXXPPPPPP 617
P PPPPPP
Sbjct: 310 PMCMAPPPPPPPP 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,312,030
Number of Sequences: 27780
Number of extensions: 312594
Number of successful extensions: 4176
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2146
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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