Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_K01
(927 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 34 0.14
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 26 2.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 3.0
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 30 3.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 3.0
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 24 3.2
06_03_1363 - 29576265-29577575 29 5.2
04_04_0009 + 22134160-22134696 29 5.2
03_06_0144 - 31969609-31969866,31969961-31970371,31970472-319705... 29 5.2
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 6.9
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 9.2
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 9.2
07_01_0862 - 7172083-7172931 28 9.2
06_02_0126 + 12130409-12130532,12131015-12131373 28 9.2
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -1
Query: 624 GGGXSPXXGXVKXLFXPPPXXXGXXVFXRXGGGXFYXXXXSXXGGGG 484
GGG G V PPP G GGG +Y GGGG
Sbjct: 78 GGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGG 124
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -1
Query: 636 PXXXGGGXSPXXGXVKXLFXPPPXXXGXXVFXRXGGGXFYXXXXSXXGGGG 484
P GG G PPP G GGG Y + GGGG
Sbjct: 73 PSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGG 123
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 588 P*PPXXXXXPPPPXXGGXPPXKKNXXGGXPXXKRXXPP 701
P PP PPPP G PP P K PP
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPP 365
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +2
Query: 485 PPPPXXEXXXX*NXPPPXRXKTXXPXFXGGGXKRXLTXPXXGDXPPPXXXG----XPPXK 652
PPPP PPP + P G P G PPP G PP
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPP----PPPAKGPPPPPPPKGPSPPPPPPP 370
Query: 653 KKXXGGXPP 679
GG PP
Sbjct: 371 GGKKGGPPP 379
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 25.8 bits (54), Expect(2) = 4.3
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = -3
Query: 460 PPPPPPXXXEKKXXXXXPXXSPXFWXGXXPPGXPLFXXXNXFP 332
PPPPPP P P P P N FP
Sbjct: 621 PPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFP 663
Score = 25.4 bits (53), Expect(2) = 2.6
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = -3
Query: 460 PPPPPPXXXEKKXXXXXPXXSPXFWXGXXPPGXP 359
PPPPPP + P P PP P
Sbjct: 605 PPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPP 638
Score = 23.0 bits (47), Expect(2) = 2.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -3
Query: 499 PXGGGXFXSXGXXPPPPPP 443
P G S PPPPPP
Sbjct: 554 PSGNKPAFSPPPPPPPPPP 572
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -3
Query: 499 PXGGGXFXSXGXXPPPPPP 443
P + S PPPPPP
Sbjct: 574 PLPQSNYASSQPPPPPPPP 592
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +3
Query: 594 PPXXXXXPPPPXXGGXPPXKK--NXXGGXPXXKRXXPP 701
PP PPPP G PP + N G P ++ PP
Sbjct: 48 PPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPP 85
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/55 (32%), Positives = 21/55 (38%)
Frame = -2
Query: 647 GGAXPXXGGGGXXXXXGXLRXFXXPPPXXXVXXFXAGGGGGXFIXXXFPSXGGGG 483
GG P GGGG G R + + GGGGG + GGGG
Sbjct: 44 GGRGPPGGGGGRGYEPGGGRGYGGGGGGGG-RGYGGGGGGGGYESGGGRGYGGGG 97
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 567 GGGAXKGP*PPXXXXXPPPPXXGGXPPXKKNXXGGXPXXKRXXPPG 704
GG P PP PPPP PP + G P PPG
Sbjct: 269 GGQVPAAPPPPAG---PPPPAPPPLPPSHHHHHGHHPPPPHPLPPG 311
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 24.2 bits (50), Expect(2) = 3.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 460 PPPPPPXXXEKKXXXXXPXXSP 395
PPPPPP K P P
Sbjct: 123 PPPPPPPPPSPKDAAADPAKEP 144
Score = 23.8 bits (49), Expect(2) = 3.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 475 SXGXXPPPPPP 443
S G PPPPPP
Sbjct: 120 SFGPPPPPPPP 130
>06_03_1363 - 29576265-29577575
Length = 436
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = -3
Query: 493 GGGXFXSXGXXPPPPPPXXXEKKXXXXXPXXSPXFWXGXXPPG 365
GGG PPPPPP ++ P P W P G
Sbjct: 379 GGGKVLIVDVTPPPPPP-PAARRESWAAPPPPPRMWEVAAPGG 420
>04_04_0009 + 22134160-22134696
Length = 178
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 575 PPPXXXVXXFXAGGGGGXFIXXXFPSXGGGG 483
PPP +GGGGG I S GGGG
Sbjct: 64 PPPPPPSSSGKSGGGGGSNIREAAASGGGGG 94
>03_06_0144 -
31969609-31969866,31969961-31970371,31970472-31970542,
31970637-31970723,31970816-31971389
Length = 466
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 493 GGGXFXSXGXXPPPPPPXXXEKK 425
GGG + G PPPPPP E +
Sbjct: 55 GGGGRDTSGPKPPPPPPWLAEPR 77
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 460 PPPPPPXXXEKKXXXXXPXXSPXFWXGXXPPGXP 359
PPPPPP P P G PP P
Sbjct: 357 PPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPP 390
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 588 P*PPXXXXXPPPPXXGGXPPXKKNXXGGXP 677
P PP PPPP G PP G P
Sbjct: 618 PRPPGAPPPPPPPGKPGGPPPPPPRPGSLP 647
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 588 P*PPXXXXXPPPPXXGGXPPXKKNXXGGXP 677
P PP PPPP G PP G P
Sbjct: 923 PRPPGAPPPPPPPGKPGGPPPPPPPPGSLP 952
>07_01_0862 - 7172083-7172931
Length = 282
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 460 PPPPPPXXXEKKXXXXXPXXSP 395
PPPPPP EKK P P
Sbjct: 131 PPPPPPTAEEKKLLLFPPPLPP 152
>06_02_0126 + 12130409-12130532,12131015-12131373
Length = 160
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = -2
Query: 653 FXGGAXPXXGGGGXXXXXGXLRXFXXPPPXXXVXXFXAGGGGGXFIXXXFPSXG--GGG 483
+ GG GGGG G + + GGGGG + +P G GGG
Sbjct: 96 YGGGYGGGYGGGGGGGGYGGYGGYGGGGYEGYGRGYGGGGGGGGYGGGGYPGGGYYGGG 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,505,649
Number of Sequences: 37544
Number of extensions: 425432
Number of successful extensions: 3881
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3319
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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