Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_J21
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.031
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.031
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.054
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 35 0.094
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 35 0.094
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 33 0.22
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 33 0.22
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 0.41
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 32 0.50
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.50
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.50
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.50
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.66
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.66
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 32 0.66
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 32 0.66
U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical pr... 31 0.88
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.5
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 31 1.5
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 31 1.5
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 2.7
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 2.7
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 3.5
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 3.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.5
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.7
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 4.7
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 29 4.7
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 29 4.7
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 4.7
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.2
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 6.2
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 6.2
U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical pr... 29 6.2
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 6.2
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 28 8.2
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 28 8.2
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 8.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.2
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 8.2
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 28 8.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.2
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 24 8.4
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 409 PPRPPPXFFXXSRXXXXXDLXXXTQXPPPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXP 588
PP PPP T PPP P PPPP R P P G P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 589 XP 594
P
Sbjct: 321 PP 322
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 487 PPPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGPA 606
PPP G + PPPP P P G G P P P+
Sbjct: 350 PPPPRYPSAGPGMYPPPPPSRP-PAPPSGHGMIPPPPPPS 388
Score = 31.9 bits (69), Expect = 0.66
Identities = 26/76 (34%), Positives = 27/76 (35%)
Frame = +1
Query: 382 GXTPXXXXXPPRPPPXFFXXSRXXXXXDLXXXTQXPPPXXXGXRGXPLXPPPPXRXPXPG 561
G TP P PPP SR + PPP G P PPPP R P G
Sbjct: 305 GRTPGPPGMPGMPPPP--PPSRFGPPG-MGGMPPPPPPGMRYPGGMP--PPPPPRYPSAG 359
Query: 562 XGGGXGXXPXPXGPAP 609
G P PAP
Sbjct: 360 P-GMYPPPPPSRPPAP 374
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +1
Query: 409 PPRPP-PXFFXXSRXXXXXDLXXXTQXPPPXXX-GXRGXPL--XPPPPXRXPXPGXGG 570
PP PP P + PPP G G P PPPP R PG GG
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 332
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +2
Query: 377 PXXXPRKXXXXPPGPPXXXXXXXXXXXXXIXXXXLKXPPXXXGEXGDXPXPPPPPXGXQX 556
P P PP PP + PP G G PPPPP G +
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP---PPSRFGPPGMGGMPPPPPPGMRY 343
Query: 557 P 559
P
Sbjct: 344 P 344
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 487 PPPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
PPP P PP P P P G P P P P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 409 PPRPPPXFFXXSRXXXXXDLXXXTQXPPPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXP 588
PP PPP T PPP P PPPP R P P G P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 589 XP 594
P
Sbjct: 331 PP 332
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 487 PPPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGPA 606
PPP G + PPPP P P G G P P P+
Sbjct: 360 PPPPRYPSAGPGMYPPPPPSRP-PAPPSGHGMIPPPPPPS 398
Score = 31.9 bits (69), Expect = 0.66
Identities = 26/76 (34%), Positives = 27/76 (35%)
Frame = +1
Query: 382 GXTPXXXXXPPRPPPXFFXXSRXXXXXDLXXXTQXPPPXXXGXRGXPLXPPPPXRXPXPG 561
G TP P PPP SR + PPP G P PPPP R P G
Sbjct: 315 GRTPGPPGMPGMPPPP--PPSRFGPPG-MGGMPPPPPPGMRYPGGMP--PPPPPRYPSAG 369
Query: 562 XGGGXGXXPXPXGPAP 609
G P PAP
Sbjct: 370 P-GMYPPPPPSRPPAP 384
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +1
Query: 409 PPRPP-PXFFXXSRXXXXXDLXXXTQXPPPXXX-GXRGXPL--XPPPPXRXPXPGXGG 570
PP PP P + PPP G G P PPPP R PG GG
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 342
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +2
Query: 377 PXXXPRKXXXXPPGPPXXXXXXXXXXXXXIXXXXLKXPPXXXGEXGDXPXPPPPPXGXQX 556
P P PP PP + PP G G PPPPP G +
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP---PPSRFGPPGMGGMPPPPPPGMRY 353
Query: 557 P 559
P
Sbjct: 354 P 354
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 487 PPPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
PPP P PP P P P G P P P P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.5 bits (78), Expect = 0.054
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 487 PPPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGPA 606
PPP G G P PP P PG G G P GP+
Sbjct: 436 PPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARGPS 475
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +1
Query: 511 RGXPLXPPPPXRXPXPG-XGGGXGXXP--XPXGPAP 609
RG P PPPP P PG GGG G P P P P
Sbjct: 784 RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGP 819
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +1
Query: 511 RGXPLXPPPPXRXPXPG-XGGGXGXXP--XPXGPAP 609
RG P PPPP P PG GGG G P P P P
Sbjct: 784 RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGP 819
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 511 RGXPLXPPPPXRXPXPGXGGGXGXXPXPXGP 603
RG P PPPP P PG GG G P P
Sbjct: 784 RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 511 RGXPLXPPPPXRXPXPGXGGGXGXXPXPXGP 603
RG P PPPP P PG GG G P P
Sbjct: 784 RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 494 GGGX*VXXXRSPPPPPRXXXKKXGGGRGGXXXXXG 390
GGG +PPPPP GGG GG G
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGG 77
Score = 28.7 bits (61), Expect(2) = 0.41
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 494 GGGX*VXXXRSPPPPPRXXXKKXGGGRGGXXXXXG 390
GGG +PPPPP GGG GG G
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCG 134
Score = 22.6 bits (46), Expect(2) = 0.41
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 608 GAGPXGXGXXPXPPPXPGXG 549
G G G G P PPP P G
Sbjct: 44 GGGGCGGGCAP-PPPPPACG 62
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +1
Query: 409 PPRPPPXFFXXSRXXXXXDLXXXTQXPP--PXXXGXRGXPLXPPPPXRXPXPGXGGGXGX 582
PP PP + Q PP P G G P P P PG GGG
Sbjct: 260 PPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQPGAGGGCDH 319
Query: 583 XPXP 594
P P
Sbjct: 320 CPPP 323
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +1
Query: 391 PXXXXXPPRPPPXFFXXSRXXXXXDLXXXTQXPPPXXXGXRGXPLXPPPPXRXPXPGXGG 570
P PP PPP PPP G PPPP P P G
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS-----PPPPPTGSPPPPPAG 286
Query: 571 GXGXXPXPXGPAP 609
G P P P
Sbjct: 287 GSPPPPRAGSPPP 299
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/82 (28%), Positives = 25/82 (30%), Gaps = 8/82 (9%)
Frame = +3
Query: 390 PXXXXXXPPAPPXFFSXXAXXXXXXSXXXHSXXPPXXXG------KXGXPPXPPPPXXA- 548
P PP PP S PP G + G PP PPPP +
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Query: 549 -TXXRTRGXGGXXPXPXGAGXP 611
T G P P G G P
Sbjct: 308 PTGSLPPPQAGGSPPPAGTGSP 329
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/88 (25%), Positives = 24/88 (27%), Gaps = 3/88 (3%)
Frame = -3
Query: 608 GAGPXGXGXXPXPPPXPGXGXRXXXXXXXXXPLF---PXXXGGGX*VXXXRSPPPPPRXX 438
G+ P P PPP G P P GG SPPPPP
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
Query: 437 XKKXGGGRGGXXXXXGVXPVAXXTPPXP 354
G P +PP P
Sbjct: 305 GSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 513 GXPPXPPPPXXATXXRTRGXGGXXPXPXGAGXPKXXQKG 629
G PP PPPP + G P P AG P + G
Sbjct: 235 GSPPPPPPPKGSPPL---AGSGSPPPPPAAGSPPPPRTG 270
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +1
Query: 391 PXXXXXPPRPPPXFFXXSRXXXXXDLXXXTQXPPPXXXGXRGXPLXPPPPXRXPXPGXGG 570
P PP PPP PPP G PPPP P P G
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS-----PPPPPTGSPPPPPAG 307
Query: 571 GXGXXPXPXGPAP 609
G P P P
Sbjct: 308 GSPPPPRAGSPPP 320
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/82 (28%), Positives = 25/82 (30%), Gaps = 8/82 (9%)
Frame = +3
Query: 390 PXXXXXXPPAPPXFFSXXAXXXXXXSXXXHSXXPPXXXG------KXGXPPXPPPPXXA- 548
P PP PP S PP G + G PP PPPP +
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Query: 549 -TXXRTRGXGGXXPXPXGAGXP 611
T G P P G G P
Sbjct: 329 PTGSLPPPQAGGSPPPAGTGSP 350
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/88 (25%), Positives = 24/88 (27%), Gaps = 3/88 (3%)
Frame = -3
Query: 608 GAGPXGXGXXPXPPPXPGXGXRXXXXXXXXXPLF---PXXXGGGX*VXXXRSPPPPPRXX 438
G+ P P PPP G P P GG SPPPPP
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
Query: 437 XKKXGGGRGGXXXXXGVXPVAXXTPPXP 354
G P +PP P
Sbjct: 326 GSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 513 GXPPXPPPPXXATXXRTRGXGGXXPXPXGAGXPKXXQKG 629
G PP PPPP + G P P AG P + G
Sbjct: 256 GSPPPPPPPKGSPPL---AGSGSPPPPPAAGSPPPPRTG 291
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +1
Query: 391 PXXXXXPPRPPPXFFXXSRXXXXXDLXXXTQXPPPXXXGXRGXPLXPPPPXRXPXPGXGG 570
P PP PPP PPP G PPPP P P G
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS-----PPPPPTGSPPPPPAG 292
Query: 571 GXGXXPXPXGPAP 609
G P P P
Sbjct: 293 GSPPPPRAGSPPP 305
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/82 (28%), Positives = 25/82 (30%), Gaps = 8/82 (9%)
Frame = +3
Query: 390 PXXXXXXPPAPPXFFSXXAXXXXXXSXXXHSXXPPXXXG------KXGXPPXPPPPXXA- 548
P PP PP S PP G + G PP PPPP +
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Query: 549 -TXXRTRGXGGXXPXPXGAGXP 611
T G P P G G P
Sbjct: 314 PTGSLPPPQAGGSPPPAGTGSP 335
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/88 (25%), Positives = 24/88 (27%), Gaps = 3/88 (3%)
Frame = -3
Query: 608 GAGPXGXGXXPXPPPXPGXGXRXXXXXXXXXPLF---PXXXGGGX*VXXXRSPPPPPRXX 438
G+ P P PPP G P P GG SPPPPP
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
Query: 437 XKKXGGGRGGXXXXXGVXPVAXXTPPXP 354
G P +PP P
Sbjct: 311 GSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 513 GXPPXPPPPXXATXXRTRGXGGXXPXPXGAGXPKXXQKG 629
G PP PPPP + G P P AG P + G
Sbjct: 241 GSPPPPPPPKGSPPL---AGSGSPPPPPAAGSPPPPRTG 276
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.66
Identities = 24/93 (25%), Positives = 28/93 (30%)
Frame = +1
Query: 409 PPRPPPXFFXXSRXXXXXDLXXXTQXPPPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXP 588
PP PPP F + PPP G PPP P P GG
Sbjct: 612 PPPPPPQSFGMA----PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVL 667
Query: 589 XPXGPAPXXXXKKXRXXKMKKXPXSRQKTXXTP 687
PA + K S Q+T +P
Sbjct: 668 AKLPPAQDGRSNLLAEIQAGKQLRSVQQTADSP 700
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.9 bits (69), Expect = 0.66
Identities = 24/93 (25%), Positives = 28/93 (30%)
Frame = +1
Query: 409 PPRPPPXFFXXSRXXXXXDLXXXTQXPPPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXP 588
PP PPP F + PPP G PPP P P GG
Sbjct: 438 PPPPPPQSFGMA----PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVL 493
Query: 589 XPXGPAPXXXXKKXRXXKMKKXPXSRQKTXXTP 687
PA + K S Q+T +P
Sbjct: 494 AKLPPAQDGRSNLLAEIQAGKQLRSVQQTADSP 526
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = -2
Query: 423 GGPGGXXLXXRGXSXG----PXXPPXPXKPPLPP 334
GGPGG RG G P PP P KPP P
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKP 652
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = -2
Query: 423 GGPGGXXLXXRGXSXG----PXXPPXPXKPPLPP 334
GGPGG RG G P PP P KPP P
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKP 652
>U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical
protein F08B4.7 protein.
Length = 142
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 493 PXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGP 603
P G G P+ P P P G G G P P GP
Sbjct: 83 PMMGGPPGMPMMAPRPFPGPGVGFPGAPGMPPFPGGP 119
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Frame = +1
Query: 361 GGVXXATGXTPXXXXXPPRPPPXFFXXSRXXXXXD-----LXXXTQXPPPXXXGXRGXPL 525
GG G P PP PPP L + PPP G P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP- 769
Query: 526 XPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
PPP P G GG P P AP
Sbjct: 770 --PPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3
Query: 461 PPPPPRXXXKKXGGGRGGXXXXXGVXPVAXXTPPXP 354
PPPPP GG G+ P++ PP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Frame = +1
Query: 361 GGVXXATGXTPXXXXXPPRPPPXFFXXSRXXXXXD-----LXXXTQXPPPXXXGXRGXPL 525
GG G P PP PPP L + PPP G P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP- 769
Query: 526 XPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
PPP P G GG P P AP
Sbjct: 770 --PPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3
Query: 461 PPPPPRXXXKKXGGGRGGXXXXXGVXPVAXXTPPXP 354
PPPPP GG G+ P++ PP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Frame = +1
Query: 361 GGVXXATGXTPXXXXXPPRPPPXFFXXSRXXXXXD-----LXXXTQXPPPXXXGXRGXPL 525
GG G P PP PPP L + PPP G P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP- 352
Query: 526 XPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
PPP P G GG P P AP
Sbjct: 353 --PPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3
Query: 461 PPPPPRXXXKKXGGGRGGXXXXXGVXPVAXXTPPXP 354
PPPPP GG G+ P++ PP P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 487 PPPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
PPP G P P P PG G G P GP P
Sbjct: 159 PPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGP 199
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/93 (25%), Positives = 26/93 (27%), Gaps = 2/93 (2%)
Frame = +2
Query: 338 GKGGXXGXGGXXGPXXXPR-KXXXXPPGPPXXXXXXXXXXXXXIXXXXLKX-PPXXXGEX 511
G G G G GP P P GPP + GE
Sbjct: 174 GPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEA 233
Query: 512 GDXPXPPPPPXGXQXPDXGXGXXXTXXPXGRXP 610
G P PP P G PD G P + P
Sbjct: 234 GPGPAGPPGPAGPAGPDGQSGSGSAGGPGPKGP 266
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/92 (27%), Positives = 28/92 (30%), Gaps = 1/92 (1%)
Frame = +2
Query: 338 GKGGXXGXGGXXGPXXXPRKXXXXPPGPPXXXXXXXXXXXXXIXXXXLKXPPXXXGEXGD 517
G+ G G G G PPGPP + PP GE G
Sbjct: 192 GEQGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQN-SGPPGPIGEMG- 249
Query: 518 XPXPPPPPXGXQXPDXGXG-XXXTXXPXGRXP 610
P PP P G P G + P G P
Sbjct: 250 -PPGPPGPRGEPGPPGPFGPPGDSGEPGGHCP 280
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/92 (27%), Positives = 28/92 (30%), Gaps = 1/92 (1%)
Frame = +2
Query: 338 GKGGXXGXGGXXGPXXXPRKXXXXPPGPPXXXXXXXXXXXXXIXXXXLKXPPXXXGEXGD 517
G+ G G G G PPGPP + PP GE G
Sbjct: 192 GEQGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQN-SGPPGPIGEMG- 249
Query: 518 XPXPPPPPXGXQXPDXGXG-XXXTXXPXGRXP 610
P PP P G P G + P G P
Sbjct: 250 -PPGPPGPRGEPGPPGPFGPPGDSGEPGGHCP 280
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = -3
Query: 845 GXXGGGXPGGGXRXXPXFFFLGXXXXXPRXKGXGXFXXXGGGGGGR 708
G GGG GGG R G R G G GGGGGGR
Sbjct: 82 GGNGGGGNGGGGRGG------GGGGGGGRGGGGGGRGGGGGGGGGR 121
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +1
Query: 745 PXPXSRXXXXXXPKKKXKGXXRXPPPGXPPPXXPGLXKKKKXNXPPXXQXXGRXXXPP 918
P SR P R PPP PPP P + PP PP
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 520 PLXPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
P PPPP P P GGG G GP P
Sbjct: 60 PALPPPPPPPPAP-IGGGAGYAAPFGGPGP 88
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 520 PLXPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
P PPPP P P GGG G GP P
Sbjct: 60 PALPPPPPPPPAP-IGGGAGYAAPFGGPGP 88
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 490 PPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
PP G G P PP + PG G G P P P
Sbjct: 142 PPGPAGNAGNPGPKGPPGQPGAPGEQGPNGRPGAPGAPGP 181
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 505 GXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
G G PPPP P P G G P P AP
Sbjct: 27 GGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAP 61
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Frame = +1
Query: 376 ATGXTPXXXXXPPR---PPPXFFXXSRXXXXXDLXXXTQXPPPXXXGXRGXPLXPPPPXR 546
+T P PP PPP ++ PPP G P PPP
Sbjct: 525 STSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPP--- 581
Query: 547 XPXPGXGGGXGXXPXPXG 600
P P GG P P G
Sbjct: 582 -PPPMLGGPPPPPPPPGG 598
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 488 PPXXXGEXGDXPXPPPPPXGXQXP 559
PP G P PPPPP G P
Sbjct: 579 PPPPPPMLGGPPPPPPPPGGLMGP 602
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.7
Identities = 27/101 (26%), Positives = 28/101 (27%), Gaps = 2/101 (1%)
Frame = +2
Query: 305 GAPXQK-TXKXGGKGGXXGXGGXXGPXXXPRKXXXXPPGPPXXXXXXXXXXXXXIXXXXL 481
G P + T G G G G G P PG P
Sbjct: 171 GTPGRPGTDAAPGSPGPRGPPGPAGEAGAP--GPAGEPGTPAISEPLTPGAPGEPGDSGP 228
Query: 482 KXPPXXXGEXG-DXPXPPPPPXGXQXPDXGXGXXXTXXPXG 601
PP G G D P PP P G PD G P G
Sbjct: 229 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPG 269
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/73 (32%), Positives = 24/73 (32%)
Frame = -3
Query: 626 FLXXFXGAGPXGXGXXPXPPPXPGXGXRXXXXXXXXXPLFPXXXGGGX*VXXXRSPPPPP 447
FL G G G P PP G G PL GGG PPP P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGG----GGCCPPPAP 72
Query: 446 RXXXKKXGGGRGG 408
GGG GG
Sbjct: 73 -----ACGGGCGG 80
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +2
Query: 338 GKGGXXGXGGXXGPXXXPRKXXXXPPGPPXXXXXXXXXXXXXIXXXXLKXPPXXXGEXGD 517
GK G G G G + PPGPP PP GE GD
Sbjct: 259 GKPGPIGPPGPKGNPGPDGQSYQGPPGPP--GDSGTPGHEGRAGPNGPAGPPGDNGEKGD 316
Query: 518 XPXPPPP 538
PPP
Sbjct: 317 CGHCPPP 323
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +2
Query: 338 GKGGXXGXGGXXGPXXXPRKXXXXPPGPPXXXXXXXXXXXXXIXXXXLKXPPXXXGEXGD 517
GK G G G G + PPGPP PP GE GD
Sbjct: 259 GKPGPIGPPGPKGNPGPDGQSYQGPPGPP--GDSGTPGHEGRAGPNGPAGPPGDNGEKGD 316
Query: 518 XPXPPPP 538
PPP
Sbjct: 317 CGHCPPP 323
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 487 PPPXXXGXRGXPLXPPPPXRXPXPG 561
PPP G G L PPPP PG
Sbjct: 49 PPPPPFGPVGYALPPPPPNGYALPG 73
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 5/44 (11%)
Frame = +1
Query: 490 PPXXXGXRGXPLXPPPPXRXPXPGXGG-----GXGXXPXPXGPA 606
P G G P P PP PG G G P P GPA
Sbjct: 171 PAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPA 214
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 490 PPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGP 603
PP G G P P + PG GGG G P GP
Sbjct: 159 PPGPAGEPGHDGAPGAPGKPGAPGVGGGSG-APGAPGP 195
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +2
Query: 488 PPXXXGEXG-DXPXPPPPPXGXQXPDXGXGXXXTXXPXG 601
PP G G D P PP P G PD G P G
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPG 271
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 305 GAPXQKTXKXGGKGGXXGXGGXXGPXXXP-RKXXXXPPGPP 424
G P Q G G G G GP P PPGPP
Sbjct: 209 GTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPP 249
>U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical
protein R02F2.5 protein.
Length = 223
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +1
Query: 745 PXPXSRXXXXXXPKKKXKGXXRXPPPGXPPPXXPGLXKK 861
P P + P+++ +G + PPP PP P +K
Sbjct: 29 PSPNASTEQMAYPRQQPQGIPQGPPPAYAPPAAPKAPEK 67
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +2
Query: 488 PPXXXGEXG-DXPXPPPPPXGXQXPDXGXGXXXTXXPXG 601
PP G G D P PP P G PD G P G
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPG 271
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 305 GAPXQKTXKXGGKGGXXGXGGXXGPXXXP-RKXXXXPPGPP 424
G P Q G G G G GP P PPGPP
Sbjct: 209 GTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPP 249
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 1/91 (1%)
Frame = +2
Query: 305 GAPXQKTXKXG-GKGGXXGXGGXXGPXXXPRKXXXXPPGPPXXXXXXXXXXXXXIXXXXL 481
GAP G G+ G G G GP P P G P
Sbjct: 133 GAPGADGDAAGPGEAGPAGPAGPPGPDGQP--GAPGPNGQPGAAGTTSTNEPGSPGPAGP 190
Query: 482 KXPPXXXGEXGDXPXPPPPPXGXQXPDXGXG 574
P GE P PP P G P G
Sbjct: 191 PGPAGPAGEDAAAPESPPGPPGPPGPPGKDG 221
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 490 PPXXXGXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
P G G P PP PG GG G P P P
Sbjct: 161 PAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGP 200
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 305 GAPXQKTXKXG--GKGGXXGXGGXXGPXXXPRKXXXXPPGP 421
GAP Q T G G G G G GP P PGP
Sbjct: 222 GAPGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGASEPGP 262
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 411 PPAPPXFFSXXAXXXXXXSXXXHSXXPPXXXGKXGXPPXPPPP 539
PPAPP A + PP G PP PPPP
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPP-PPLPPVGAGAPPPPPPPPPP 256
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 305 GAPXQKTXKXG--GKGGXXGXGGXXGPXXXPRKXXXXPPGP 421
GAP Q T G G G G G GP P PGP
Sbjct: 232 GAPGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGASEPGP 272
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 505 GXRGXPLXPPPPXRXPXPGXGGGXGXXPXPXGPAP 609
G G PPPP P G GGG P PAP
Sbjct: 23 GGGGCGCAPPPP---PACGCGGGAAPPPAYVAPAP 54
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 411 PPAPPXFFSXXAXXXXXXSXXXHSXXPPXXXGKXGXPPXPPPP 539
PPAPP A + PP G PP PPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPP-PPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 411 PPAPPXFFSXXAXXXXXXSXXXHSXXPPXXXGKXGXPPXPPPP 539
PPAPP A + PP G PP PPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPP-PPLPPVGAGAPPPPPPPPPP 242
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 23.8 bits (49), Expect(2) = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 814 PPPGXPPPXXPGLXKKKKXNXP 879
PPP PPP P + ++ + P
Sbjct: 387 PPPPAPPPPAPAVPEEAQAPTP 408
Score = 22.6 bits (46), Expect(2) = 8.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 784 KKKXKGXXRXPPPGXPPP 837
K +G PPP PPP
Sbjct: 378 KDDCQGLQTPPPPAPPPP 395
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,882,669
Number of Sequences: 27780
Number of extensions: 304671
Number of successful extensions: 4295
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3262
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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