Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_J17
(1043 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 25 1.8
03_05_0161 + 21400580-21401695 27 4.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 4.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 4.6
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 4.6
07_01_0080 + 587674-588510 29 4.6
06_03_1274 + 28897491-28897707,28897804-28897935,28898029-288980... 26 5.2
02_05_0686 - 30900748-30902167,30903442-30904742 29 6.1
02_05_0002 - 24849189-24849825,24850267-24850328 29 6.1
08_02_0937 + 22801526-22802461 29 8.1
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 29 8.1
04_04_1101 + 30903578-30903988,30904693-30905655 26 9.1
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 25.0 bits (52), Expect(2) = 1.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 858 GGXXPPPPPP 829
GG PPPPPP
Sbjct: 939 GGPPPPPPPP 948
Score = 24.2 bits (50), Expect(2) = 1.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 846 PPPPPPXXXGXXXSVVGG 793
PPPPPP ++ GG
Sbjct: 941 PPPPPPPPGSLPRNLAGG 958
>03_05_0161 + 21400580-21401695
Length = 371
Score = 26.6 bits (56), Expect(2) = 4.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 952 GGXXXPPPPXXXXXXXSXXXPPPXPPPGG 1038
GG PPPP PPP P G
Sbjct: 19 GGTTTPPPPPPAQQQQQQPLPPPPPQEQG 47
Score = 21.4 bits (43), Expect(2) = 4.3
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 814 PXXXXXGGGGGXPPPP 861
P GGG PPPP
Sbjct: 12 PRKGAGGGGTTTPPPP 27
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 967 PPPPXXXXXXXSXXXPPPXPPP 1032
PPPP S PPP PPP
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPP 572
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 967 PPPPXXXXXXXSXXXPPPXPPP 1032
PPPP S PPP PPP
Sbjct: 571 PPPPLPQSNYASSQPPPPPPPP 592
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 967 PPPPXXXXXXXSXXXPPPXPPP 1032
PPPP S PPP PPP
Sbjct: 605 PPPPPPILPNRSVPPPPPPPPP 626
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 967 PPPPXXXXXXXSXXXPPPXPPP 1032
PPPP S PPP PPP
Sbjct: 620 PPPPPPPLPNHSVLPPPPPPPP 641
>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 967 PPPPXXXXXXXSXXXPPPXPPP 1032
PPPP S PPP PPP
Sbjct: 92 PPPPPPPYGVNSSQPPPPPPPP 113
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 967 PPPPXXXXXXXSXXXPPPXPPP 1032
PPPP S PPP PPP
Sbjct: 93 PPPPPPYGVNSSQPPPPPPPPP 114
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 29.5 bits (63), Expect = 4.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 951 GGXGPXPPPPPXXP 992
GG GP PPPPP P
Sbjct: 38 GGAGPTPPPPPPPP 51
>07_01_0080 + 587674-588510
Length = 278
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 967 PPPPXXXXXXXSXXXPPPXPPP 1032
PPPP S PPP PPP
Sbjct: 92 PPPPPPPPSSGSPPPPPPPPPP 113
>06_03_1274 +
28897491-28897707,28897804-28897935,28898029-28898096,
28898216-28898280,28898468-28898534,28898630-28898917,
28898995-28899102,28899236-28899487,28899918-28899997,
28900092-28900185,28900728-28900810,28901319-28901873,
28902085-28902616
Length = 846
Score = 26.2 bits (55), Expect(2) = 5.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 830 GGGGGGXXPPP 862
GGGGGG PPP
Sbjct: 36 GGGGGGAVPPP 46
Score = 21.4 bits (43), Expect(2) = 5.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 950 GGGXXXPPPP 979
GGG PPPP
Sbjct: 38 GGGGAVPPPP 47
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 967 PPPPXXXXXXXSXXXPPPXPPPGG 1038
PPPP PPP PPP G
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKG 361
>02_05_0002 - 24849189-24849825,24850267-24850328
Length = 232
Score = 29.1 bits (62), Expect = 6.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 951 GGXGPXPPPPPXXPP 995
GG P PPPPP PP
Sbjct: 212 GGGHPHPPPPPPPPP 226
>08_02_0937 + 22801526-22802461
Length = 311
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 967 PPPPXXXXXXXSXXXPPPXPPPG 1035
PPP S PPP PPPG
Sbjct: 60 PPPEPEEEEEVSSPPPPPPPPPG 82
>01_06_1670 - 39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 967 PPPPXXXXXXXSXXXPPPXPPPGG 1038
PPPP PPP PPP G
Sbjct: 412 PPPPPTHTHGPPPPPPPPPPPPVG 435
>04_04_1101 + 30903578-30903988,30904693-30905655
Length = 457
Score = 26.2 bits (55), Expect(2) = 9.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 952 GGXXXPPPPXXXXXXXSXXXPPPXPPP 1032
GG PPPP S P PPP
Sbjct: 178 GGGTAPPPPTIPSFRRSIVAPRDPPPP 204
Score = 20.6 bits (41), Expect(2) = 9.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 832 GGGGGXPPPP 861
G GGG PPP
Sbjct: 176 GHGGGTAPPP 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,137,819
Number of Sequences: 37544
Number of extensions: 564743
Number of successful extensions: 8953
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7395
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3082779744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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