Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_J16
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0179 + 15483854-15483968,15484196-15484302,15485211-154853...    31   0.96 
01_05_0657 + 24034198-24036306                                         29   5.1  
05_01_0429 + 3399266-3399708,3401320-3401382,3403919-3404345,340...    29   6.7  
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085...    29   6.7  

>10_08_0179 +
           15483854-15483968,15484196-15484302,15485211-15485304,
           15485537-15485637,15486143-15486199,15486614-15486761,
           15486982-15487049
          Length = 229

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 145 FNCSFCCINNNLN-WVHNYTLXVNKERSVKTENLLGAEWLI 264
           F+C  C +N+ ++ +V++     N+ERS+    LL  EW I
Sbjct: 172 FSCQVCVLNHTISLFVNSQRFACNQERSIDILMLLPGEWKI 212


>01_05_0657 + 24034198-24036306
          Length = 702

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 350 WCNITIITKFVYKKVW-RHYWGCNCIG 273
           WC + +I+K+V ++ W    W  N IG
Sbjct: 387 WCKVALISKYVARESWSSRQWVANLIG 413


>05_01_0429 +
           3399266-3399708,3401320-3401382,3403919-3404345,
           3404863-3405141
          Length = 403

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -3

Query: 237 LCLHGSFFVYXQGIIVNPIKIIVNATKTAVKMSVCQNSSILNYLG 103
           +CLH S   Y  G++   I  IVN    A+K   C+   IL+ LG
Sbjct: 150 ICLHISASEYCSGVMQRSISAIVNEYIEAMKKLACE---ILDLLG 191


>04_04_1263 - 32207636-32207938,32208020-32208170,32208263-32208500,
            32208604-32208814,32208927-32209108,32209196-32209297,
            32210002-32211187,32212103-32212499,32212551-32212582,
            32212885-32213157,32213307-32213394,32213486-32213723,
            32213824-32214034,32214119-32214300,32214378-32214479,
            32214801-32216224,32216751-32216822,32217688-32217719,
            32218186-32218263,32218425-32218512,32218608-32218845,
            32219060-32219162,32219386-32219558,32219644-32219745,
            32219825-32220606,32220659-32221012,32224055-32224140,
            32224250-32224400,32224534-32224771,32224876-32225119,
            32225190-32225368,32225577-32225675,32225835-32227083
          Length = 3195

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 484  ITQIKNEIPKIILRCVSSLFIFYCI 558
            + + K++IPKI+L  ++SL I  CI
Sbjct: 1898 VNKKKSDIPKIVLPVITSLLILMCI 1922


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,900,291
Number of Sequences: 37544
Number of extensions: 286367
Number of successful extensions: 443
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)