Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_J13
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X74614-1|CAA52685.1| 250|Homo sapiens outer dense fiber protein... 34 0.80
BC104457-1|AAI04458.1| 250|Homo sapiens outer dense fiber of sp... 34 0.80
BC104456-1|AAI04457.1| 250|Homo sapiens outer dense fiber of sp... 34 0.80
AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens ... 32 2.4
AF249273-1|AAF64304.1| 869|Homo sapiens Bcl-2-associated transc... 32 3.2
X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3... 30 9.8
L29218-1|AAA61482.1| 499|Homo sapiens clk2 protein. 30 9.8
L29216-1|AAA61481.1| 139|Homo sapiens clk2 protein. 30 9.8
BC067773-1|AAH67773.1| 434|Homo sapiens arginine/serine-rich co... 30 9.8
BC053603-1|AAH53603.1| 499|Homo sapiens CDC-like kinase 2 protein. 30 9.8
BC014067-1|AAH14067.1| 498|Homo sapiens CDC-like kinase 2 protein. 30 9.8
BC008684-1|AAH08684.2| 434|Homo sapiens arginine/serine-rich co... 30 9.8
AL713999-30|CAI95098.1| 498|Homo sapiens CDC-like kinase 2 prot... 30 9.8
AL713999-29|CAI95097.1| 497|Homo sapiens CDC-like kinase 2 prot... 30 9.8
AL713999-28|CAI95099.1| 499|Homo sapiens CDC-like kinase 2 prot... 30 9.8
AF023268-1|AAC51817.1| 499|Homo sapiens clk2 kinase protein. 30 9.8
AC112721-1|AAY24135.1| 2588|Homo sapiens unknown protein. 30 9.8
AB212664-1|BAE93762.1| 434|Homo sapiens hypothetical protein pr... 30 9.8
AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collage... 30 9.8
>X74614-1|CAA52685.1| 250|Homo sapiens outer dense fiber protein
protein.
Length = 250
Score = 33.9 bits (74), Expect = 0.80
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 309 CKIHLLCHDWCCNSFHRYYNEYHYCMMNSLRHHH-GLHGFHNCLDCYCLYKNLCIR 145
C L H +CC H Y YC+ S R GL + C C C YK C+R
Sbjct: 35 CLCDLYMHPYCCCDLH----PYPYCLCYSKRSRSCGLCDLYPC--CLCDYKLYCLR 84
>BC104457-1|AAI04458.1| 250|Homo sapiens outer dense fiber of sperm
tails 1 protein.
Length = 250
Score = 33.9 bits (74), Expect = 0.80
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 309 CKIHLLCHDWCCNSFHRYYNEYHYCMMNSLRHHH-GLHGFHNCLDCYCLYKNLCIR 145
C L H +CC H Y YC+ S R GL + C C C YK C+R
Sbjct: 35 CLCDLYMHPYCCCDLH----PYPYCLCYSKRSRSCGLCDLYPC--CLCDYKLYCLR 84
>BC104456-1|AAI04457.1| 250|Homo sapiens outer dense fiber of sperm
tails 1 protein.
Length = 250
Score = 33.9 bits (74), Expect = 0.80
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 309 CKIHLLCHDWCCNSFHRYYNEYHYCMMNSLRHHH-GLHGFHNCLDCYCLYKNLCIR 145
C L H +CC H Y YC+ S R GL + C C C YK C+R
Sbjct: 35 CLCDLYMHPYCCCDLH----PYPYCLCYSKRSRSCGLCDLYPC--CLCDYKLYCLR 84
>AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ43779 fis, clone TESTI2051488. ).
Length = 168
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = -1
Query: 282 WC-CNSFH----RYYNEYHYCMMNSLRHHHGLHGFHN 187
WC C+S H R ++ H+C + HH G H HN
Sbjct: 122 WCSCHSHHHSHHRSHHRSHHCSHHHSHHHSGHHSHHN 158
>AF249273-1|AAF64304.1| 869|Homo sapiens Bcl-2-associated
transcription factor short form protein.
Length = 869
Score = 31.9 bits (69), Expect = 3.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 249 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYS-NREYGGRG 371
RY S R+Y+ SR R D Y + YR + N R YG RG
Sbjct: 33 RYRSRSRTYSRSRSR-DRMYSRDYRRDYRNNRGMRRPYGYRG 73
>X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3
chain protein.
Length = 3176
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 282 SRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMEF 407
S D E Y KTYR+++ V + R RGGSP +EF
Sbjct: 1481 SNDVFPEFYLKTYRSQAPVLDAIRRLRLRGGSPLNTGKALEF 1522
>L29218-1|AAA61482.1| 499|Homo sapiens clk2 protein.
Length = 499
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 243 DTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMR 398
D RY R + SRDR D Y YR+ N Y + S + R R
Sbjct: 70 DRRYCGSYRRNDYSRDRGDAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRR 121
>L29216-1|AAA61481.1| 139|Homo sapiens clk2 protein.
Length = 139
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 243 DTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMR 398
D RY R + SRDR D Y YR+ N Y + S + R R
Sbjct: 70 DRRYCGSYRRNDYSRDRGDAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRR 121
>BC067773-1|AAH67773.1| 434|Homo sapiens arginine/serine-rich
coiled-coil 2 protein.
Length = 434
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 249 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMEFHQIQRR 425
R +S GRS++ SR R ++ + S + S R S ERK+ R + +RR
Sbjct: 117 RKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRR 175
>BC053603-1|AAH53603.1| 499|Homo sapiens CDC-like kinase 2 protein.
Length = 499
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 243 DTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMR 398
D RY R + SRDR D Y YR+ N Y + S + R R
Sbjct: 70 DRRYCGSYRRNDYSRDRGDAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRR 121
>BC014067-1|AAH14067.1| 498|Homo sapiens CDC-like kinase 2 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 243 DTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMR 398
D RY R + SRDR D Y YR+ N Y + S + R R
Sbjct: 70 DRRYCGSYRRNDYSRDRGDAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRR 121
>BC008684-1|AAH08684.2| 434|Homo sapiens arginine/serine-rich
coiled-coil 2 protein.
Length = 434
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 249 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMEFHQIQRR 425
R +S GRS++ SR R ++ + S + S R S ERK+ R + +RR
Sbjct: 117 RKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRR 175
>AL713999-30|CAI95098.1| 498|Homo sapiens CDC-like kinase 2
protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 243 DTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMR 398
D RY R + SRDR D Y YR+ N Y + S + R R
Sbjct: 70 DRRYCGSYRRNDYSRDRGDAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRR 121
>AL713999-29|CAI95097.1| 497|Homo sapiens CDC-like kinase 2
protein.
Length = 497
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 243 DTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMR 398
D RY R + SRDR D Y YR+ N Y + S + R R
Sbjct: 69 DRRYCGSYRRNDYSRDRGDAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRR 120
>AL713999-28|CAI95099.1| 499|Homo sapiens CDC-like kinase 2
protein.
Length = 499
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 243 DTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMR 398
D RY R + SRDR D Y YR+ N Y + S + R R
Sbjct: 70 DRRYCGSYRRNDYSRDRGDAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRR 121
>AF023268-1|AAC51817.1| 499|Homo sapiens clk2 kinase protein.
Length = 499
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 243 DTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMR 398
D RY R + SRDR D Y YR+ N Y + S + R R
Sbjct: 70 DRRYCGSYRRNDYSRDRGDAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRR 121
>AC112721-1|AAY24135.1| 2588|Homo sapiens unknown protein.
Length = 2588
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 282 SRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMEF 407
S D E Y KTYR+++ V + R RGGSP +EF
Sbjct: 1481 SNDVFPEFYLKTYRSQAPVLDAIRRLRLRGGSPLNTGKALEF 1522
>AB212664-1|BAE93762.1| 434|Homo sapiens hypothetical protein
protein.
Length = 434
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 249 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMEFHQIQRR 425
R +S GRS++ SR R ++ + S + S R S ERK+ R + +RR
Sbjct: 117 RKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRR 175
>AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collagen
isoform 5 precursor variant protein.
Length = 1702
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 282 SRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMEF 407
S D E Y KTYR+++ V + R RGGSP +EF
Sbjct: 6 SNDVFPEFYLKTYRSQAPVLDAIRRLRLRGGSPLNTGKALEF 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,984,844
Number of Sequences: 237096
Number of extensions: 1481249
Number of successful extensions: 4662
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4601
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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