Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_J12
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0323 - 27928385-27928534,27930326-27930430                       57   2e-08
04_04_0910 - 29321128-29321276,29321977-29322508,29323301-293237...    42   0.001
07_03_1136 + 24218601-24218734,24218769-24219906                       33   0.32 
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    32   0.56 
02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.7  
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309...    30   3.0  
07_03_0106 - 13460882-13462086,13463452-13463629                       29   3.9  

>02_05_0323 - 27928385-27928534,27930326-27930430
          Length = 84

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = +2

Query: 68  KCFKKCINKPGTSLDSSEQKCIAMCMDRYMDSWNLVSRTYSS 193
           KCF KC+ KPG+SL  SE  CI+ C+DRY+++  +VSR   S
Sbjct: 40  KCFAKCVTKPGSSLSGSESSCISRCVDRYIEATGIVSRALFS 81


>04_04_0910 -
           29321128-29321276,29321977-29322508,29323301-29323706,
           29323933-29324028,29324563-29324645,29326620-29326732,
           29327156-29327315
          Length = 512

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +2

Query: 68  KCFKKCINKPGTSLDSSEQKCIAMCMDRYMDSWNLVSRTYSSRIQRE 208
           KCF KC+ KPGTSL  SE  CI+     Y+      ++T  ++++RE
Sbjct: 96  KCFAKCVTKPGTSLSGSESSCISR---SYLLREIFATQTQFTKVERE 139


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -1

Query: 813 PPXXGXPXSPPXGGXTXSPXXXXGGXX-SXXGEXGGGPISKPPFPGG 676
           PP  G    P  GG    P    GG   S     GGG  ++PP PGG
Sbjct: 91  PPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGG 137


>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
 Frame = -1

Query: 816 FPPXXGXPX-SPPX-----GGXTXSPXXXXGGXXSXXGEXGGGPISKPPFPGG 676
           +PP  G P  +PP      GG    P    GG        GGGP + PP+ GG
Sbjct: 350 YPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGG 402


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 20/68 (29%), Positives = 21/68 (30%)
 Frame = +3

Query: 708 PLPXPRXXTPXPRXXGXGXXFXPPXGGXXXXPXXGGXPGKKXFXXXAPXXPXXXXGPGGG 887
           P P P    P P          PP  G    P   G P        +P  P    G  GG
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376

Query: 888 XXPXAPPP 911
             P  PPP
Sbjct: 377 PPP--PPP 382


>05_04_0148 -
           18426903-18427106,18430516-18430594,18430752-18430935,
           18431020-18431063,18432028-18432165,18432713-18434511
          Length = 815

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +3

Query: 63  LKNVSKSASISQVLLWIAPN---RSA*LCVWIGTWIHG-ISYRGHTAVEFNARETTCKA 227
           L NVS +AS SQ+L  + P+   +S  L +  G    G I+ R H  V  N R  T +A
Sbjct: 85  LNNVSFTASSSQILAVVGPSGAGKSTLLRILSGRGTGGEIAARPHAVVSVNGRAVTSRA 143


>07_03_0106 - 13460882-13462086,13463452-13463629
          Length = 460

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 278 YYSLYVHQSFYSRSSVYSLTCCFSRVEF 195
           Y+S+  + SFY+  SV +L C FS + F
Sbjct: 416 YFSVLPYMSFYTPGSVLNLACLFSCIFF 443


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,374,529
Number of Sequences: 37544
Number of extensions: 310080
Number of successful extensions: 686
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)