Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_J10
(908 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF005372-1|AAB81030.1| 225|Caenorhabditis elegans histone H1.5 ... 62 7e-10
AF003145-1|AAB57720.1| 225|Caenorhabditis elegans Histone h1 li... 62 7e-10
AF068708-3|AAC17754.1| 253|Caenorhabditis elegans Histone h1 li... 59 4e-09
AF026521-1|AAB82588.1| 253|Caenorhabditis elegans histone H1.4 ... 59 4e-09
AF005371-1|AAB81029.1| 253|Caenorhabditis elegans histone H1.4 ... 59 4e-09
AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 l... 59 5e-09
U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like... 57 2e-08
AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3 ... 57 2e-08
AF017812-1|AAB70559.1| 191|Caenorhabditis elegans histone H1.2 ... 55 6e-08
AF017811-1|AAB70666.1| 191|Caenorhabditis elegans histone H1.2 ... 55 6e-08
AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 li... 55 6e-08
Z79603-3|CAB01892.1| 208|Caenorhabditis elegans Hypothetical pr... 55 8e-08
AF017810-1|AAB70665.1| 208|Caenorhabditis elegans histone H1.1 ... 55 8e-08
X53277-1|CAA37372.1| 208|Caenorhabditis elegans histone H1 prot... 52 8e-07
Z78239-1|CAB01632.1| 232|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF002679-1|AAB60893.1| 232|Caenorhabditis elegans histone H1-li... 50 2e-06
Z81539-4|CAB04392.2| 208|Caenorhabditis elegans Hypothetical pr... 34 0.16
AF100656-11|AAF99960.1| 115|Caenorhabditis elegans Hypothetical... 34 0.16
Z93395-5|CAE18034.1| 519|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z83112-6|CAE17883.1| 519|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 30 2.0
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 30 2.0
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 29 3.5
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 4.6
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 4.6
AL031630-14|CAA20993.1| 185|Caenorhabditis elegans Hypothetical... 29 6.1
Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 28 8.0
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.0
>AF005372-1|AAB81030.1| 225|Caenorhabditis elegans histone H1.5
protein.
Length = 225
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+MI EA+ LK RKG S AI K+IT KY + +K N ++ +K GV+ +VQT G
Sbjct: 43 NMITEAVSNLKDRKGSSRVAIFKFITAKYTLGDQVNKTNAHLRSALKKGVVSKVLVQTNG 102
Query: 355 VGAAGSFKLAPIKEK 399
+GA G F+LA + EK
Sbjct: 103 IGANGRFRLA-VAEK 116
>AF003145-1|AAB57720.1| 225|Caenorhabditis elegans Histone h1 like
protein 5 protein.
Length = 225
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+MI EA+ LK RKG S AI K+IT KY + +K N ++ +K GV+ +VQT G
Sbjct: 43 NMITEAVSNLKDRKGSSRVAIFKFITAKYTLGDQVNKTNAHLRSALKKGVVSKVLVQTNG 102
Query: 355 VGAAGSFKLAPIKEK 399
+GA G F+LA + EK
Sbjct: 103 IGANGRFRLA-VAEK 116
>AF068708-3|AAC17754.1| 253|Caenorhabditis elegans Histone h1 like
protein 4 protein.
Length = 253
Score = 59.3 bits (137), Expect = 4e-09
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+M+ EA+ +K RKG S AI KYIT KY + A+KIN ++K + G+ A VQ G
Sbjct: 57 NMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQANKINAHLRKALNKGLESNAFVQASG 116
Query: 355 VGAAGSFKLA 384
GA G F+LA
Sbjct: 117 NGANGRFRLA 126
>AF026521-1|AAB82588.1| 253|Caenorhabditis elegans histone H1.4
protein.
Length = 253
Score = 59.3 bits (137), Expect = 4e-09
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+M+ EA+ +K RKG S AI KYIT KY + A+KIN ++K + G+ A VQ G
Sbjct: 57 NMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQANKINAHLRKALNKGLESNAFVQASG 116
Query: 355 VGAAGSFKLA 384
GA G F+LA
Sbjct: 117 NGANGRFRLA 126
>AF005371-1|AAB81029.1| 253|Caenorhabditis elegans histone H1.4
protein.
Length = 253
Score = 59.3 bits (137), Expect = 4e-09
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+M+ EA+ +K RKG S AI KYIT KY + A+KIN ++K + G+ A VQ G
Sbjct: 57 NMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQANKINAHLRKALNKGLESNAFVQASG 116
Query: 355 VGAAGSFKLA 384
GA G F+LA
Sbjct: 117 NGANGRFRLA 126
>AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 like
protein 6 protein.
Length = 190
Score = 58.8 bits (136), Expect = 5e-09
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+M+ A+ LK RKG S AI KYIT Y++ KIN ++ +K GV A+VQT G
Sbjct: 40 NMVTAAISSLKERKGSSKIAILKYITANYKLGDQVKKINSNLRSALKKGVASKALVQTVG 99
Query: 355 VGAAGSFKLA 384
GA G F++A
Sbjct: 100 TGATGRFRVA 109
>U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like
protein 3 protein.
Length = 208
Score = 57.2 bits (132), Expect = 2e-08
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRVDAD--KINYLIKKQIKNGVIDGAIVQTKG 354
+M+ A+ LK RKG S AI KYIT+ Y V KIN ++ + GV+ A+VQ+ G
Sbjct: 43 NMVTAAINGLKERKGSSKIAILKYITKNYNVGDQIIKINARLRDTLNKGVVSKALVQSVG 102
Query: 355 VGAAGSFKLAPIKEKKKQTPL 417
GA+G F++ K + P+
Sbjct: 103 TGASGRFRVTEKKAAAAKKPV 123
>AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3
protein.
Length = 208
Score = 57.2 bits (132), Expect = 2e-08
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRVDAD--KINYLIKKQIKNGVIDGAIVQTKG 354
+M+ A+ LK RKG S AI KYIT+ Y V KIN ++ + GV+ A+VQ+ G
Sbjct: 43 NMVTAAINGLKERKGSSKIAILKYITKNYNVGDQIIKINARLRDTLNKGVVSKALVQSVG 102
Query: 355 VGAAGSFKLAPIKEKKKQTPL 417
GA+G F++ K + P+
Sbjct: 103 TGASGRFRVTEKKAAAAKKPV 123
>AF017812-1|AAB70559.1| 191|Caenorhabditis elegans histone H1.2
protein.
Length = 191
Score = 55.2 bits (127), Expect = 6e-08
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+M+ A+ LK RKG S AI KYIT Y+V KIN ++ + GV A+VQ+ G
Sbjct: 43 NMVTAAISSLKERKGSSKIAILKYITANYKVGDQLTKINSRLRAALNKGVASKALVQSVG 102
Query: 355 VGAAGSFKLA 384
GA+G F++A
Sbjct: 103 NGASGRFRVA 112
>AF017811-1|AAB70666.1| 191|Caenorhabditis elegans histone H1.2
protein.
Length = 191
Score = 55.2 bits (127), Expect = 6e-08
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+M+ A+ LK RKG S AI KYIT Y+V KIN ++ + GV A+VQ+ G
Sbjct: 43 NMVTAAISSLKERKGSSKIAILKYITANYKVGDQLTKINSRLRAALNKGVASKALVQSVG 102
Query: 355 VGAAGSFKLA 384
GA+G F++A
Sbjct: 103 NGASGRFRVA 112
>AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 like
protein 2, isoforma protein.
Length = 241
Score = 55.2 bits (127), Expect = 6e-08
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+M+ A+ LK RKG S AI KYIT Y+V KIN ++ + GV A+VQ+ G
Sbjct: 93 NMVTAAISSLKERKGSSKIAILKYITANYKVGDQLTKINSRLRAALNKGVASKALVQSVG 152
Query: 355 VGAAGSFKLA 384
GA+G F++A
Sbjct: 153 NGASGRFRVA 162
>Z79603-3|CAB01892.1| 208|Caenorhabditis elegans Hypothetical
protein M163.3 protein.
Length = 208
Score = 54.8 bits (126), Expect = 8e-08
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+MI EA+ +LK RKG S AI K+I++ Y++ + +IN +++ +K GV A+VQ G
Sbjct: 43 NMIKEAIKQLKDRKGASKQAILKFISQNYKLGDNVIQINAHLRQALKRGVTSKALVQAAG 102
Query: 355 VGAAGSFKLAPIKEKKKQTP 414
GA G F++ P K + P
Sbjct: 103 SGANGRFRV-PEKAAAAKKP 121
>AF017810-1|AAB70665.1| 208|Caenorhabditis elegans histone H1.1
protein.
Length = 208
Score = 54.8 bits (126), Expect = 8e-08
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 354
+MI EA+ +LK RKG S AI K+I++ Y++ + +IN +++ +K GV A+VQ G
Sbjct: 43 NMIKEAIKQLKDRKGASKQAILKFISQNYKLGDNVIQINAHLRQALKRGVTSKALVQAAG 102
Query: 355 VGAAGSFKLAPIKEKKKQTP 414
GA G F++ P K + P
Sbjct: 103 SGANGRFRV-PEKAAAAKKP 121
>X53277-1|CAA37372.1| 208|Caenorhabditis elegans histone H1
protein.
Length = 208
Score = 51.6 bits (118), Expect = 8e-07
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 187 IHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKGVG 360
I EA+ +LK RKG S AI K+I++ Y++ + +IN ++ +K GV A+VQ +G G
Sbjct: 45 IKEAIKQLKDRKGASKQAILKFISQNYKLGDNVIQINAHHRQALKRGVTSKALVQARGSG 104
Query: 361 AAGSFKLAPIKEKKKQTP 414
A G F++ P K + P
Sbjct: 105 ANGRFRV-PEKAAAAKKP 121
>Z78239-1|CAB01632.1| 232|Caenorhabditis elegans Hypothetical
protein C30G7.1 protein.
Length = 232
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRVDAD--KINYLIKKQIKNGVIDGAIVQTKG 354
DMI A+ + G S AI KYI + Y V + K+N ++ +K V G I QT+G
Sbjct: 42 DMIKGAIQAIDNGTGSSKAAILKYIAQNYHVGENLPKVNNHLRSVLKKAVDSGDIEQTRG 101
Query: 355 VGAAGSFKLAPIKEKKKQ 408
GA GSF++ EK Q
Sbjct: 102 HGATGSFRMGKECEKNLQ 119
>AF002679-1|AAB60893.1| 232|Caenorhabditis elegans histone H1-like
protein protein.
Length = 232
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 181 DMIHEALGELKTRKGVSLYAIKKYITEKYRVDAD--KINYLIKKQIKNGVIDGAIVQTKG 354
DMI A+ + G S AI KYI + Y V + K+N ++ +K V G I QT+G
Sbjct: 42 DMIKGAIQAIDNGTGSSKAAILKYIAQNYHVGENLPKVNNHLRSVLKKAVDSGDIEQTRG 101
Query: 355 VGAAGSFKLAPIKEKKKQ 408
GA GSF++ EK Q
Sbjct: 102 HGATGSFRMGKECEKNLQ 119
>Z81539-4|CAB04392.2| 208|Caenorhabditis elegans Hypothetical
protein F46A8.6 protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 574 ENQLKITKANTKKPSKDKMAAGEVADAPKRKKTKSSKDAPTXRPKK 711
+NQ K K +K+P+K K + + + +KK KSSK + KK
Sbjct: 65 DNQKKSKKKKSKEPAKKKKKSADSSQKVSKKKKKSSKSKKSAEKKK 110
>AF100656-11|AAF99960.1| 115|Caenorhabditis elegans Hypothetical
protein F49F1.12 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 574 ENQLKITKANTKKPSKDKMAAGEVADAPKRKKTKSSKDAPTXRPKK 711
+NQ K K +K+P+K K + + + +KK KSSK + KK
Sbjct: 2 DNQKKSKKKKSKEPAKKKKKSADSSQKVSKKKKKSSKSKKSAEKKK 47
>Z93395-5|CAE18034.1| 519|Caenorhabditis elegans Hypothetical
protein ZC101.3 protein.
Length = 519
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = -1
Query: 242 MAYNETPFLVFSSPRASWIMSFVLFFSIKTSAVWMVCFFFFAVALGKGVSDSASDSSRLH 63
+AYN TPFLV S ++ ++ KT AVW+ V++ + ++S SD L
Sbjct: 128 VAYNFTPFLVAVSMAQGTVVFLTAMYAKKTWAVWLSALPVLYVSMHE--TNSLSDDPFLI 185
Query: 62 FGFVT 48
F F++
Sbjct: 186 FTFLS 190
>Z83112-6|CAE17883.1| 519|Caenorhabditis elegans Hypothetical
protein ZC101.3 protein.
Length = 519
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = -1
Query: 242 MAYNETPFLVFSSPRASWIMSFVLFFSIKTSAVWMVCFFFFAVALGKGVSDSASDSSRLH 63
+AYN TPFLV S ++ ++ KT AVW+ V++ + ++S SD L
Sbjct: 128 VAYNFTPFLVAVSMAQGTVVFLTAMYAKKTWAVWLSALPVLYVSMHE--TNSLSDDPFLI 185
Query: 62 FGFVT 48
F F++
Sbjct: 186 FTFLS 190
>Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical
protein F44D12.8 protein.
Length = 447
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 556 RSKKTDENQ-LKITKANTKKPSKDKMAAGEVADAPKRKKTKSSKDAPTXR 702
R KK NQ L N K S + AG D PK+K + +S D+ R
Sbjct: 110 RKKKNQVNQSLSAENTNAKTSSDNDERAGSKNDKPKKKNSHTSSDSRRRR 159
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 638 ERSRTRRKEKKQNRPKTRQLPAQKKFHADEKEKLREFXKTAK 763
ER R +KEK++ K ++ QKK H D +E K +K
Sbjct: 480 ERKRKEKKEKERQERKEKEHDEQKKRHRDNEEGAGSSSKRSK 521
>Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical
protein C16C2.4 protein.
Length = 357
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 635 PERSRTRRKEKKQNRPKTRQLPAQKKFHADEKEKLREFXKTAKMKPKA 778
P+ S ++EKK+N P+ ++ +++ DE E+ E +T +P A
Sbjct: 261 PQSSSEIKEEKKENEPEVKETVSEESCE-DEDEEEEELKETVSEQPAA 307
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 565 KTDENQLKITKANTKKPSKDKMAAGEVADAPKRKKTKSSK 684
K+ + + K + KKPS D + +G + APKR K ++ +
Sbjct: 114 KSKDEKKKKKNSKGKKPSTDPLFSGPLTQAPKRSKGETQE 153
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 565 KTDENQLKITKANTKKPSKDKMAAGEVADAPKRKK-TKSSKDAPTXRPKK 711
K +EN+ K K N KK +K E D K+KK K +KD+ KK
Sbjct: 67 KIEENKEKREKKNKKKGNKKDEDEEEEEDKDKKKKDKKKNKDSEEEEDKK 116
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 638 ERSRTRRKEKKQNRPKTRQLPAQKKFHADEKEKLREFXKTAKMKPKAXD 784
+R R R+K + + R K QL + + ++KE++RE K +MK + D
Sbjct: 738 KRRRKRQKYRLRYRKKKYQL-RKGALNMEQKERMRELKKRRRMKKQKID 785
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 513 QTEAGCSERENRETEKQEDG*ESIEN-HESEYEKTVERQNXXXXXXXXAEKKKNKIVQRR 689
+ E +E+E +E EK+EDG E E+ E + E + + E K++K + +
Sbjct: 70 EAEKEKNEKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDKKEKTK 129
Query: 690 ANXPPKKNSMLMKRK 734
KN K K
Sbjct: 130 TEDNEGKNEEKKKEK 144
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 559 SKKTDENQLKITKANTKKPSKDKMAAGEVADAPKRKKTKSSKDAPT 696
S+ DE ++K +K +KK K + + + +AP++KKT+ K + T
Sbjct: 210 SESEDEKEVKKSKKKSKKVVKKESESED--EAPEKKKTEKRKRSKT 253
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 559 SKKTDENQLKITKANTKKPSKDKMAAGEVADAPKRKKTKSSKDAPT 696
S+ DE ++K +K +KK K + + + +AP++KKT+ K + T
Sbjct: 210 SESEDEKEVKKSKKKSKKVVKKESESED--EAPEKKKTEKRKRSKT 253
>AL031630-14|CAA20993.1| 185|Caenorhabditis elegans Hypothetical
protein Y38H6C.15 protein.
Length = 185
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 559 SKKTDENQLKITKANTKKPSKDKMAAGEVADAPKRKKTKSSKDAP 693
SKK+D+ + K T ++ KP K + E + PK K+ K P
Sbjct: 92 SKKSDKTKKKTTVSSEDKPEKPEKLTEE--EKPKEKEKAKEKTVP 134
>Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical
protein F23A7.5 protein.
Length = 632
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 111 SDSKEEKTNHPNRRSLD-REEKNKRHDPRGSRRTED*KRRFIIRHQE 248
S S E++ + RS D R R RGSRR D + R RH++
Sbjct: 575 SGSIEKRRSQSRSRSRDSRRHSRSRSGSRGSRRRSDRRARHERRHRD 621
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical
protein R09E10.7 protein.
Length = 1717
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +1
Query: 289 NYLIKKQIKNGVIDGAIVQTKGVGAAGSFKLAP------IKEKKKQTPLMQ 423
NYL +K I+ GV AI + S+K+ P +K+KKK+ L++
Sbjct: 579 NYLNEKDIRFGVPTDAIFYVDAPNLSNSYKMVPPHREKVLKKKKKKKKLLK 629
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/47 (23%), Positives = 27/47 (57%)
Frame = +3
Query: 108 QSDSKEEKTNHPNRRSLDREEKNKRHDPRGSRRTED*KRRFIIRHQE 248
+ + KEE+ +++ D ++K + D + S++TE+ + + + QE
Sbjct: 71 EEEKKEEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQE 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,245,271
Number of Sequences: 27780
Number of extensions: 221965
Number of successful extensions: 1404
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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