Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_J09
         (1101 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    35   0.13 
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   2.1  
01_03_0005 + 11568545-11569119,11569179-11569191                       30   2.8  
01_01_0796 + 6190931-6192745                                           29   8.7  

>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = -2

Query: 638 PPPPXXXGGGXGXFFXPPPPXXXXXXXXGGXKKKKXXXFFXKKKXPPP 495
           PPPP   GGG G F+  PPP                  +   +  PPP
Sbjct: 18  PPPPQAGGGGGGEFYRGPPPQPPMRQLSAASSTNIPGDYAAHQGHPPP 65


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 640 PPPPPXXXGGGXXXFFXPPPP 578
           PPPPP    G    F  PPPP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPP 567



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 640 PPPPPXXXGGGXXXFFXPPPP 578
           PPPPP     G    F PPPP
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPP 566


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +3

Query: 579 GGGGXKKXXXPPPXXXGGGGG 641
           GGGG      PPP   GGGGG
Sbjct: 83  GGGGTVMYTSPPPPYSGGGGG 103


>01_01_0796 + 6190931-6192745
          Length = 604

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 640 PPPPPXXXGGGXXXFFXPPPP 578
           PPPPP   GG       PPPP
Sbjct: 238 PPPPPPAAGGSLWIPELPPPP 258


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,841,181
Number of Sequences: 37544
Number of extensions: 650081
Number of successful extensions: 2529
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3304646468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)