Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_J06
(941 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 86 8e-18
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 76 6e-15
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 73 8e-14
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 72 1e-13
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 63 6e-11
SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyc... 57 4e-09
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 53 5e-08
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 40 7e-04
SPBC16A3.14 |||mitochondrial ribosomal protein subunit S26|Schiz... 33 0.044
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.72
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 1.3
SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 28 1.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.7
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 28 1.7
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 27 3.8
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.8
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 27 5.1
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 26 6.7
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 6.7
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.8
SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces pombe... 26 8.8
>SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 671
Score = 85.8 bits (203), Expect = 8e-18
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Frame = +3
Query: 72 KYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCXXXXXXCV 251
K IL +P+ D+ D + YESL+ + + + +L LNFS+E V
Sbjct: 434 KRILQKPLCLEDVKDVDEVYYESLKWI-------KNNDVDESLCLNFSVEENRFGESVTV 486
Query: 252 ELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALEGLTAEDL 431
+LIP GR + V N +Y++ ++H+++ S E+ A++ G+ +++P+S L+ +L
Sbjct: 487 DLIPNGRNIAVNNQNKMNYLKALTEHKLVTSTEEQFNALKGGLNELIPDSVLQIFNENEL 546
Query: 432 RLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQDLVYFWTG 611
LLNG DI+V +T + + E + + W W ++ + + ++ L+ F TG
Sbjct: 547 DTLLNGKRDIDVQDWKRFTDYRSYT-ETDDIVI----WFWELLSEWSPEKKAKLLQFATG 601
Query: 612 SPALPASEEGFQPM------PSVTIRPADD-AHLPTANTC 710
+ LP S GF+ M TI + LP A+TC
Sbjct: 602 TSRLPLS--GFKDMHGSDGPRKFTIEKVGHISQLPKAHTC 639
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 76.2 bits (179), Expect = 6e-15
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 5/218 (2%)
Frame = +3
Query: 72 KYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCXXXXXXCV 251
K IL + + D+ D Y SL ++ + TG LDL FS+E +
Sbjct: 530 KMILQKKVTLQDMESMDAEYYRSLVWILDNDITG-------VLDLTFSVEDNCFGEVVTI 582
Query: 252 ELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALEGLTAEDL 431
+L P GR +EVT N +YV + R+ E+ A G +++P+ + +L
Sbjct: 583 DLKPNGRNIEVTEENKREYVDLVTVWRIQKRIEEQFNAFHEGFSELIPQELINVFDEREL 642
Query: 432 RLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQDLVYFWTG 611
LL+ G+ +I++ +T + S + +W W ++D+ ++ ++ L+ F TG
Sbjct: 643 ELLIGGISEIDMEDWKKHTDYRSYSEND-----QIIKWFWELMDEWSNEKKSRLLQFTTG 697
Query: 612 SPALPASE----EGFQPMPSVTIRPADDAH-LPTANTC 710
+ +P + +G TI A + + LP A+TC
Sbjct: 698 TSRIPVNGFKDLQGSDGPRKFTIEKAGEPNKLPKAHTC 735
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 72.5 bits (170), Expect = 8e-14
Identities = 48/203 (23%), Positives = 98/203 (48%)
Frame = +3
Query: 57 NRHVLKYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCXXX 236
+R V K++L R + D+ DP Y+SL ++ + + + F++E
Sbjct: 2983 SRAVYKHMLHRSVSVKDIESLDPDYYKSLVWML-------NNDITDIITEEFAVEKDVFG 3035
Query: 237 XXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALEGL 416
V+LIP GR + VT N +YV + +++ S + L+++ G D++P ++
Sbjct: 3036 EKTVVDLIPNGRNIPVTELNKQNYVNRMVDYKLRESVKDQLKSLLDGFSDIIPSHLIQIF 3095
Query: 417 TAEDLRLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQDLV 596
++L LL++G+ +I++ + T ++ + P+ +W W V ER L+
Sbjct: 3096 NEQELELLISGLPEIDIDDWKNNTEYHGYNVSSPQ-----VQWFWRAVRSFDEEERAKLL 3150
Query: 597 YFWTGSPALPASEEGFQPMPSVT 665
F TG+ +P + GF+ + ++
Sbjct: 3151 QFATGTSKVPLN--GFKELEGMS 3171
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 71.7 bits (168), Expect = 1e-13
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 5/218 (2%)
Frame = +3
Query: 72 KYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCXXXXXXCV 251
K +L + + D+ D Y SL+ ++ + TG LDL FS+E V
Sbjct: 549 KKLLRKKVSLADMESIDAEFYRSLKWVLENDITG-------ILDLTFSVEEDHFGEVRTV 601
Query: 252 ELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALEGLTAEDL 431
ELI G +EVT N YV ++ R+ E+ A G ++++ + +L
Sbjct: 602 ELITNGENIEVTEENKKKYVDLVTEWRVSKRVEQQFNAFYSGFVELVSPDLVNVFDEREL 661
Query: 432 RLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQDLVYFWTG 611
LL+ G+ D++V S+T + P +W W I+ + +R L+ F TG
Sbjct: 662 ELLIGGISDVDVEDWKSHTEYRTYIATDP-----VIKWFWEIIAGWKNEDRSKLLQFATG 716
Query: 612 SPALPASE----EGFQPMPSVTIRPADDA-HLPTANTC 710
+ +P + +G TI A LP A+TC
Sbjct: 717 TSRIPVNGFRDLQGSDGPRKFTIEKAGTPDQLPVAHTC 754
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 62.9 bits (146), Expect = 6e-11
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 4/234 (1%)
Frame = +3
Query: 24 YSGIP*DLLFLNRHVLKYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALD 203
Y GI D F + V K+ LG P F DL DP +YE L + + GD ++ A
Sbjct: 777 YEGIQIDAAFASFFVAKW-LGHPSYFDDLTSLDPNLYEGL--VFLKNYDGDVENDMA--- 830
Query: 204 LNFSLEMCXXXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVL 383
LNF++ ++LIP G + VT N Y+ S + + + A G
Sbjct: 831 LNFTVVHEEFGVRNVIDLIPNGSNISVTNENRLQYIHLVSNYYLNARLSRQCRAFTNGFT 890
Query: 384 DVLPESALEGLTAEDLRLLLNG-VGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIV 560
++ L ++++L+ G I++ L +T + G +P W ++
Sbjct: 891 QIIDPHWLAMFHESEIQILVGGDPVPIDIDDLRRHTVY--AGGYEPNSPTIV--LFWEVL 946
Query: 561 DKMTHLERQDLVYFWTGSPALPASEEGFQP-MPSVTIR--PADDAHLPTANTCI 713
+ +++ V F T P GF+ MPS IR D+ LPTA+TC+
Sbjct: 947 REFEEEDKRSFVKFVTSVARPPIL--GFKALMPSFCIRVNGEDETRLPTASTCV 998
>SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 807
Score = 56.8 bits (131), Expect = 4e-09
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 23/240 (9%)
Frame = +3
Query: 60 RHVLKYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCXXXX 239
R K +L P+ F+DL F P +Y L++L++ GD ++ + LNF++ +
Sbjct: 543 RAFYKKLLQLPLSFNDLDDFQPSLYRGLKELLLFE--GDVKNTYG---LNFTINLKAVEG 597
Query: 240 XXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALEGLT 419
VEL GG EL V N +YV +Y + + + +K A G + V +A+
Sbjct: 598 FRTVELKEGGSELSVDNENRKEYVLRYVDYLLNTTVKKQFSAFFDGFMKVCGGNAISLFQ 657
Query: 420 AEDLRLLLNGVGDI-------NVAALVSYTS---FNDESGEQPERLAR--------FKR- 542
++ L+ G ++ NV Y N S +P A KR
Sbjct: 658 DNEISKLIRGSEEVIDWELLKNVCVYDFYDQNAISNSISESEPSMTASKYLCHSFVSKRK 717
Query: 543 ---WLWAIVDKMTHLERQDLVYFWTGSPALPAS-EEGFQPMPSVTIRPADDAHLPTANTC 710
W W ++ + ++ + F TGS +PA+ FQ SV + P D LP ++TC
Sbjct: 718 IILWFWDLISHYSLKMQKLFLIFVTGSDRIPATGAHNFQLRISV-LGP-DSDQLPISHTC 775
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 53.2 bits (122), Expect = 5e-08
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Frame = +3
Query: 249 VELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALEGLTAED 428
+ELIP G VT NV DY+ + + ++ LEA + G V P ++L+ LT +
Sbjct: 1458 IELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNGFSSVFPYTSLQVLTEHE 1517
Query: 429 LRLLLNGVG-DINVAALV-SYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQDLVYF 602
L L V D + A L+ S + + + E P + R L ++ +M E++D + F
Sbjct: 1518 LVTLFGTVDEDWSYATLMKSIVADHGYTMESP-TIQR----LLTLMSQMNFQEQRDFLQF 1572
Query: 603 WTGSPALP-ASEEGFQPMPSVTIR---P--ADDAHLPTANTCI 713
TGS LP G P +V R P D +LP+ TC+
Sbjct: 1573 ITGSRKLPIGGFAGLNPPLTVVRRLNEPPYVPDDYLPSVMTCV 1615
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 39.5 bits (88), Expect = 7e-04
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Frame = -2
Query: 637 SSEAGKAGDPVQKYTKSCLSKCVILSTIAHSQRLKRASRSGCSPLSSLKLV*ETRAATFI 458
SS + + P + S S + S + +S S S S+L + +++F
Sbjct: 274 SSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFS 333
Query: 457 S-PTPFSSRRKSSAVKPSSADSGNTSRTPTRIASRAFS*EINILCWEYLRT*S*TLCAVT 281
S PT SS SS+ PSS+ +T T + +S +FS ++ T S TL + +
Sbjct: 334 SSPTSSSSTISSSSSSPSSSSFSST--TSSSKSSSSFSSTVS----SSSSTSSSTLTSSS 387
Query: 280 SSSRPPGMSSTQPPPSSSHISKLKLRSRAA--KSD*ESPVSASTTSCRRLSYTIGSKNAK 107
SSS P SS+ SSH S +S +A S ++S +S S+++ S ++K
Sbjct: 388 SSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSK 447
Score = 32.7 bits (71), Expect = 0.077
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Frame = -2
Query: 637 SSEAGKAGDPVQKYTKSCLSKCVILSTIAHSQRLKRASRSGCSPLSSLKLV*ETRAATFI 458
SS + V + S S ST + S SP SS T ++ +
Sbjct: 179 SSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSS---STLTSSSL 235
Query: 457 SPTPFSSRRKSSAVKPSSADSGNTSRTPTRIASRAFS*EINILCWEYLRT*S*TLCAVTS 278
S + S SS+ SS S ++S T + +S + + + S T+ + +S
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSS 295
Query: 277 SSRPP-GMSSTQPPPSSSHISKLKLRSRAAKSD*ESPVSASTTSCRRLSYTIGSKNAKSW 101
SS P SST SSS S S ++ S S S+ T+S +S + S ++ S+
Sbjct: 296 SSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSF 355
Query: 100 N 98
+
Sbjct: 356 S 356
>SPBC16A3.14 |||mitochondrial ribosomal protein subunit
S26|Schizosaccharomyces pombe|chr 2|||Manual
Length = 277
Score = 33.5 bits (73), Expect = 0.044
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +3
Query: 543 WLWAIVDKMTHLERQDLVYFWTGSPALPASEEGFQP-----MPSVTIRPADDAHLPTANT 707
WLW ++D L L F GSP L + P +P + RP AH+P N
Sbjct: 170 WLWIVIDDYNRLNL--LRTFQAGSPYLWTRWQSNDPHLISSVPDYSARPRKYAHVPILNL 227
Query: 708 CI 713
C+
Sbjct: 228 CL 229
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.5 bits (63), Expect = 0.72
Identities = 31/121 (25%), Positives = 53/121 (43%)
Frame = -2
Query: 466 TFISPTPFSSRRKSSAVKPSSADSGNTSRTPTRIASRAFS*EINILCWEYLRT*S*TLCA 287
T +S + SS SS+ S+ S T+ +P+ +S + S S + +
Sbjct: 125 TTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSS--------------SSSSSS 170
Query: 286 VTSSSRPPGMSSTQPPPSSSHISKLKLRSRAAKSD*ESPVSASTTSCRRLSYTIGSKNAK 107
+SSS SS+ SSS S S ++ S P+++ST+S S + S ++
Sbjct: 171 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSS 230
Query: 106 S 104
S
Sbjct: 231 S 231
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = -2
Query: 283 TSSSRPPGMSSTQPPPSSSHISKLKLRSRAAKSD*ESPVSASTTSCRRLSYTIGSKNAKS 104
+SSS SS+ SSS S S ++ S S S TS S++ S ++ S
Sbjct: 168 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSS 227
Query: 103 WNRIGRP 83
+ RP
Sbjct: 228 SSSSSRP 234
Score = 26.2 bits (55), Expect = 6.7
Identities = 35/142 (24%), Positives = 63/142 (44%)
Frame = -2
Query: 529 ASRSGCSPLSSLKLV*ETRAATFISPTPFSSRRKSSAVKPSSADSGNTSRTPTRIASRAF 350
+S S S SS + ++T + +P SS SS+ SS+ S ++S + + +S +
Sbjct: 128 SSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 187
Query: 349 S*EINILCWEYLRT*S*TLCAVTSSSRPPGMSSTQPPPSSSHISKLKLRSRAAKSD*ESP 170
S + + S + + +SSS P SST SSS S S + S S
Sbjct: 188 SSSSS-------SSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSF 240
Query: 169 VSASTTSCRRLSYTIGSKNAKS 104
++ ++S + T+ ++ S
Sbjct: 241 ITTMSSSTFISTVTVTPSSSSS 262
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 28.7 bits (61), Expect = 1.3
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Frame = -2
Query: 529 ASRSGCSPLSSLKLV*ETR-AATFISPTPFSSRRKSSAVKPSSADSGNTSRTPTRIASRA 353
+S S P SS T +++ + P+ SS SS+ S+ S ++ + + S A
Sbjct: 16 SSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPA 75
Query: 352 FS*EINILCWEYLRT*S*TLCAVTSSSRPPGMSSTQPPP---SSSHISKLKLRSRAAKSD 182
S I L + S + ++TSSS SS+ P SSSH S A S
Sbjct: 76 SSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSS 135
Query: 181 *ESPVSASTTS 149
S +S+S+ S
Sbjct: 136 -SSGMSSSSLS 145
>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 728
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 170 SFSIDYKLSQALIYDWIEECQIVESNW 90
+ I YK YD + QIV+SNW
Sbjct: 111 ALKIHYKAETGRAYDKVNNAQIVQSNW 137
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 1.7
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Frame = -2
Query: 595 TKSCLSKCVILSTIAHSQRLKRASR--SGCSPLSSLKLV*ETRAATFISPTPFSSRRKSS 422
T S L+ + ST + + S S +PL+S T AAT S T S++ +S
Sbjct: 223 TSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSN---STTAATSASATSSSAQYNTS 279
Query: 421 AVKPSSADSGN-TSRTPTRIASRAFS*EINILCWEYLRT*S*TLCAVTSSSRPPGMSSTQ 245
++ PSS S S + A+ A S + + + S T + SS+ +ST
Sbjct: 280 SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTS 339
Query: 244 PPPSSSHISKLKLRSRAAKSD*ESPVSA--STTSCRRLSYTIGSKNAKS 104
P SS + S A S +P+++ STT+ S + S N+ S
Sbjct: 340 STPLSS------VNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTS 382
Score = 27.5 bits (58), Expect = 2.9
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 595 TKSCLSKCVILSTIAHSQRLKRASRSGCSPLSSLKLV*ETRAATFISPTPFSSRRKSSAV 416
T S L + ST S A+ + +PL+S+ + AT S TPF + +S+
Sbjct: 525 TSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVN----STTATSASSTPFGNSTITSSA 580
Query: 415 KPSSADSGNTS 383
S+ + NT+
Sbjct: 581 SGSTGEFTNTN 591
Score = 26.2 bits (55), Expect = 6.7
Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Frame = -2
Query: 472 AATFISPTPFSSRRKSSAVKPSSADSGNTSRTPTRIASRAFS*EINILCWEYLRT*S*TL 293
+++ S + SS SS+ SS+ + TS +PT + + S + L S T
Sbjct: 72 SSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASS-----STTS 126
Query: 292 CAVTSSSRPPGMSSTQPPPSSSHISKLKLRSRAAKSD*ESPVSASTTS---CRRLSYTIG 122
++ SSS ++ SSS S S A S S SA+ TS LS T
Sbjct: 127 SSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAA 186
Query: 121 SKNAKS 104
S +A S
Sbjct: 187 SNSATS 192
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2
Query: 277 SSRPPGMSSTQPPPSSSHISKLKLRSRAAKSD*ESPVSASTTSCRRLSYTIGSKNAKS 104
SS PP PPP ++S + K+D +S + ST + ++S +GS+ +S
Sbjct: 267 SSTPP---VHPPPPVPQNLSAVNEEFDTKKNDFDSKLPESTPAVEKVSENLGSETRES 321
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 283 TSSSRPPGMSSTQPPPSSSHISKLKLRSRAA 191
T S++PP SST PSSS I++ + S ++
Sbjct: 501 TQSTKPPTASSTTNNPSSSQINQKRSYSTSS 531
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 27.1 bits (57), Expect = 3.8
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 283 TSSSRPPGMSSTQPPPSSSHISKLKLRSRAAKSD*ESPVSASTTSCRRLSYTIGS 119
+SS+ P SS+ SSS S K S ++KS S S+ TTS R S+ S
Sbjct: 136 SSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRS--SSRTTSHRTTSHKSSS 188
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 26.6 bits (56), Expect = 5.1
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = -2
Query: 289 AVTSSSRPPGMSSTQPPPSSSHISKLKLRSRAAKSD*ESPVSASTTSCRRLSYTIGSKNA 110
A SS SS SS IS S + + + ++STTS S T GS +
Sbjct: 204 ATISSVVDSATSSVSTVIPSSIISAAPPDSASESTPASTSYASSTTSATSTSTTSGSSGS 263
Query: 109 KSWNR 95
W R
Sbjct: 264 SDWGR 268
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 311 YIIINIVRSYFKFSSARYEFYTATTFLFAHF 219
Y II+ ++ +FK+ A++ F +FLF +F
Sbjct: 172 YPIIHCLQLFFKWQYAQFLFIHRESFLFEYF 202
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 6.7
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Frame = -2
Query: 469 ATFISPTPFSSRRKSSAVKPSSADSGNTSRTPTRIASRAFS*EINILCWEYLRT*S*TLC 290
+T I PT S+ + V P+S S +T P +S S L + S T C
Sbjct: 288 STSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTS-------SSPLPSTS-TSC 339
Query: 289 AVTSSSRPPGMSSTQ-----PPPSSSHISKLKL-RSRAAKSD*ESPVSASTTSC 146
++S P G S+T PP S+S S S ++ SP+ +++TSC
Sbjct: 340 TTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSC 393
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.8
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 298 TLCAVTSSSRPPGMSSTQPPPSSSHISKLKLRSRAAKSD*ESPVSASTTSCRRLSYTIGS 119
T + TSSS SS+ SSS S + S S S S+ ++S S +I S
Sbjct: 137 TSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSGSISS 196
Query: 118 KNAKS 104
+AK+
Sbjct: 197 ADAKT 201
>SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 519 ERLARFKRWLWAIVDKMTHLERQDLVYFWTGS 614
+ RF+ W++ I++KM E++ L WT S
Sbjct: 165 DNYCRFEEWIFPILNKMVE-EQETLGTHWTPS 195
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,116,939
Number of Sequences: 5004
Number of extensions: 65300
Number of successful extensions: 308
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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