Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_J06
(941 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 71 1e-12
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 49 6e-06
09_04_0560 - 18519024-18519145,18519330-18519435,18519671-185199... 48 1e-05
05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,116... 45 1e-04
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 38 0.009
05_03_0629 + 16376575-16376689,16376792-16376839,16376927-163770... 32 0.76
11_01_0029 + 226459-226973,227053-227424,227533-227688,229513-22... 31 1.0
01_06_1743 + 39601644-39602023,39602301-39602734,39602828-396030... 31 1.0
01_01_0055 - 415666-415767,416510-416602,416776-416850,416920-41... 31 1.3
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 28 1.9
12_02_1239 - 27275110-27275445 30 2.3
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 30 3.1
02_05_0979 + 33268294-33269595 29 5.4
05_03_0458 + 14280953-14281866,14281964-14282912 24 6.1
11_01_0788 + 6599962-6602700 29 7.1
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 29 7.1
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 29 7.1
05_02_0004 - 5528713-5528718,5529039-5529390,5529802-5530339,553... 28 9.4
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 70.9 bits (166), Expect = 1e-12
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 9/226 (3%)
Frame = +3
Query: 60 RHVLKYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCXXXX 239
R K+ILG + +HD+ DP Y++L+ ++ + + D L ++D + +
Sbjct: 3388 RSFYKHILGVKVTYHDIEAVDPDYYKNLKWML-ENDVSDIPDLTFSMDPDEEKHILYEKN 3446
Query: 240 XXC-VELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALEGL 416
EL PGGR + VT ++YV ++H + + + A G +++P +
Sbjct: 3447 EVTDYELKPGGRNIRVTEETKHEYVDLVAEHILTTAIRPQINAFLEGFTELVPRELISLF 3506
Query: 417 TAEDLRLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQDLV 596
++L LL++G+ +I+ L + + S P L W W +V+ + + +
Sbjct: 3507 HDKELELLISGLPEIDFDDLKANAEYIGYSPASPVIL-----WFWEVVNGFSKEDMARFL 3561
Query: 597 YFWTGSPALPASEEGFQPMPSVT------IRPADDA--HLPTANTC 710
F TG+ +P EGF+ + ++ I A A LP+A+TC
Sbjct: 3562 QFVTGTSKVPL--EGFKALQGISGPQRFQIHKAYGAPERLPSAHTC 3605
>05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 48.8 bits (111), Expect = 6e-06
Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 11/241 (4%)
Frame = +3
Query: 24 YSGIP*DLLFLNRHVLKYILGRPIRF-HDLAFFDPIVYESLRQLVVDAETGDSQSLFAAL 200
Y GI DL F + K L F +DL DP +Y L L + GD + L
Sbjct: 773 YEGILVDLPFATFFLSK--LKHKYNFLNDLPSLDPELYRHL--LSLKHYDGD----ISQL 824
Query: 201 DLNFSLEMCXXXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGV 380
+L F + EL+PGGR++ VT+ NV Y+ + HR+ G
Sbjct: 825 ELYFVIVNNEYGEQSEEELLPGGRDMRVTSENVITYIHLVANHRLNYQIRAQSTHFLRGF 884
Query: 381 LDVLPESALEGLTAEDLRLLLNG-VGDINVAALVSYTSFNDESGEQPERLARFKRWLWAI 557
++P + + ++L++G + +++ L S T+++ G P+ W +
Sbjct: 885 QQLIPNEWINMFNEHEFQVLISGSLESLDIDDLRSNTNYS--GGYHPDH--ELIDIFWEV 940
Query: 558 VDKMTHLERQDLVYFWTGSPALPASEEGFQPM-PSVTIRPA--------DDAHLPTANTC 710
+ + ++ + F TG P GFQ + P I+ A D+ LPT+ TC
Sbjct: 941 LKSFSSHNQKKFLKFVTGCSRGPLL--GFQYLEPKFCIQRAGVPGMEEEDEDRLPTSATC 998
Query: 711 I 713
+
Sbjct: 999 M 999
>09_04_0560 - 18519024-18519145,18519330-18519435,18519671-18519907,
18521371-18521810,18523215-18525012
Length = 900
Score = 47.6 bits (108), Expect = 1e-05
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Frame = +3
Query: 54 LNRHVLKYILGRPIRFHDLAFFDPIVYESLRQLV-VDAETGDSQSLFAALDLNFSLEMCX 230
L+R + ++ GR I+ D++ DP++Y S ++++ +DA D L+L FS ++
Sbjct: 632 LDRTLFLHLAGRSIKLEDISAADPVMYASCKRILEMDAAVVDG------LELTFSRDVHE 685
Query: 231 XXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVL--PE-- 398
+EL GG++L V N Y+ + + S L G D+L PE
Sbjct: 686 LGSRRTIELCSGGKDLHVNIRNRELYIDLLIKSTFVDSISVQLTHFVRGFSDILVDPELQ 745
Query: 399 SALEGLTAEDLRLLL 443
A+E L+ E R LL
Sbjct: 746 KAVESLSIEQQRQLL 760
>05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,
1164082-1164240,1164663-1164797,1165116-1165268,
1165358-1165479,1165599-1166541,1166677-1166728,
1166873-1167963,1168058-1168384,1168479-1168559,
1168649-1168717,1168809-1168937,1169038-1169121,
1169210-1169275
Length = 1321
Score = 44.8 bits (101), Expect = 1e-04
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 15/234 (6%)
Frame = +3
Query: 54 LNRHVLKYILGRPIRFHDLAFFDPIVYESLRQ---LVVDAETGDSQSLFAALDLNFS--- 215
L++ K +L + + +D+ FDP + +++ + LV + + ++ A DL++
Sbjct: 1059 LSKAFYKIMLEQDLDIYDIPSFDPKLGKTVMEFQALVKRKKFLEERASNPAADLSYKNVR 1118
Query: 216 LE-MCXXXXXXC---VELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVL 383
LE +C EL+PGG E VT N+ +YV + +EA + G+
Sbjct: 1119 LEDLCLDFTLPGNPEYELVPGGSEKMVTLDNLEEYVSSIVDATLKSGISNQIEAFKAGIN 1178
Query: 384 DVLPESALEGLTAEDLRLLLNGVGDINVA-ALVSYTSFNDESGEQPERLARFKRWLWAIV 560
V L + +++ +L G D + L + +F+ + F I+
Sbjct: 1179 KVFALKTLRLFSEDEMERILCGEQDSWASNKLEDHINFDYGYDANSASVISFLE----IL 1234
Query: 561 DKMTHLERQDLVYFWTGSPALP-ASEEGFQPMPSVTIRPAD---DAHLPTANTC 710
+ +++ ++F TG+P LP P +V + D D LP+ NTC
Sbjct: 1235 REFGREDQRAFLHFTTGAPQLPLGGLASLDPKLTVVRKQCDGKVDNELPSVNTC 1288
>05_05_0136 - 22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 38.3 bits (85), Expect = 0.009
Identities = 60/237 (25%), Positives = 97/237 (40%), Gaps = 24/237 (10%)
Frame = +3
Query: 72 KYILGRPIRFHDLAFFDPIVYESLRQLVVDA------ETGDSQSLFAALDLNFSLEMCXX 233
+ ILG+ + +D+ FDP + +L + A E+ S + DL++ C
Sbjct: 1224 RLILGQELNIYDIHSFDPELAMTLMEFKALAARRKYLESSSSGDCKSTSDLSY--RGCRI 1281
Query: 234 XXXXCVELIPGGRE----LE-----VTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLD 386
+PG E LE V+A N+ YV + + LEA + G +
Sbjct: 1282 EDLAIEFALPGYPEYVLSLENSLDNVSADNLEQYVSFVVDATIRSGIARQLEAFKSGFNE 1341
Query: 387 VLPESALEGLTAEDLRLLLNGVGDI-NVAALVSYTSFNDESGEQPERLARFKRWLWAIVD 563
V P S L+ + ++L LL G D + A LV + F+ + L ++
Sbjct: 1342 VFPLSMLQVFSEDELERLLCGEQDTWDFAKLVDHIKFDHGYTSSSPPVIN----LLEVIQ 1397
Query: 564 KMTHLERQDLVYFWTGSPALPASEEGFQPM-PSVTI-------RPADDAHLPTANTC 710
+ +R+ + F TGSP LP G + P +T+ ADD LP+ TC
Sbjct: 1398 EFEGHQRRAFLQFITGSPRLPPG--GLAALNPKLTVVRKQHNSNEADD-DLPSVMTC 1451
>05_03_0629 +
16376575-16376689,16376792-16376839,16376927-16377012,
16377791-16377878,16378387-16378472,16378604-16378690,
16379111-16379293,16379387-16379470,16379590-16379651,
16379752-16379827,16379906-16379968,16380060-16380141,
16380840-16380916,16381502-16381549,16381681-16381743
Length = 415
Score = 31.9 bits (69), Expect = 0.76
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = -2
Query: 289 AVTSSSRPPGMSSTQPPPSSSHISKLKLRS--RAAKSD*ESPVSA---STTSCRRLSYTI 125
A +++ RPP +S PPPSS +++ + RAA++D E+ +A + + +
Sbjct: 15 ASSATFRPPLLSLRSPPPSSLRLNRRRHFQVVRAAETDKETKANAPEKAPAGGSSFNQLL 74
Query: 124 GSKNAKSWNRIGRPRM 77
G K AK N I + R+
Sbjct: 75 GIKGAKQENDIWKIRL 90
>11_01_0029 +
226459-226973,227053-227424,227533-227688,229513-229595,
229665-229728,230209-230596
Length = 525
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -2
Query: 289 AVTSSSRPPGMSSTQPPPSSSH--ISKLKLRSRAAKSD*ESPVSA 161
A T++S PP ST PP SSS ++KL LR + S S +SA
Sbjct: 14 ATTTTSPPPPPPSTPPPASSSSSSLAKLPLRLHSLASSSRSLLSA 58
>01_06_1743 +
39601644-39602023,39602301-39602734,39602828-39603006,
39603636-39603716,39603828-39603914,39604000-39604006,
39604241-39604312,39604712-39604792,39605156-39605262
Length = 475
Score = 31.5 bits (68), Expect = 1.0
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 538 LKRASRSGCSPLSSLKLV*ETRAATFISPTPFSSRRKSSAVKPSSADSGNTSRTPTRIAS 359
L+RAS S P + A + P P SSRRKS PS+ D+ ++S R AS
Sbjct: 139 LQRASISSSPPRADPFASAPASPAHSLPPNPPSSRRKSRFHYPSAPDAFSSSSAYRRAAS 198
Query: 358 RA 353
A
Sbjct: 199 SA 200
>01_01_0055 -
415666-415767,416510-416602,416776-416850,416920-417071,
417147-417267,417567-418289,418408-418489,418575-418681,
418757-418822,418941-419057,419157-419402
Length = 627
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 298 TLCAVTSSSRPPGMSSTQPPPSSSHISKLKLRSRAAKSD*ESPVSASTTS 149
T CA +++RPP + PPS++H+ RA+ + SAS ++
Sbjct: 5 TACASPAAARPPLHIPLRSPPSAAHLPSAAASRRASSAACRCTASASASA 54
>12_02_0953 -
24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 27.9 bits (59), Expect(2) = 1.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 451 TPFSSRRKSSAVKPSSADSGNTSRTPTRIASR 356
TP R KSSA S G+T TPT+ ++
Sbjct: 133 TPGRHRGKSSAAAASEGGGGSTQSTPTKSVTK 164
Score = 21.0 bits (42), Expect(2) = 1.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 289 AVTSSSRPPGMSSTQPPPSS 230
+VT + GMS+++PP SS
Sbjct: 161 SVTKPAYSIGMSASRPPMSS 180
>12_02_1239 - 27275110-27275445
Length = 111
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 579 ERQDLVYFWTGSPALPASEEGFQPMPSVTIRPA-DDAHL 692
E +DLV TG+PA P + P V +RPA D+A L
Sbjct: 50 EFRDLVQRLTGAPAPPPPRQPVAPAQPVPVRPAVDEAQL 88
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 29.9 bits (64), Expect = 3.1
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = -2
Query: 631 EAGKAGDPVQKYTKSCLSKCVILSTIAHSQRLKRASRSGCSPLSSLKLV*ETR---AATF 461
E AG + TKS + ST+ ++QR R+S S S + + TR AA+
Sbjct: 115 EEQSAGQDSRGRTKSKPIRISGSSTVDNTQRSSRSSASPIRLSPSPRSMSRTRPSSAASR 174
Query: 460 ISPTPFSSRRKSSAVKPSSADSGNTSRTPTRIASRA 353
SP PF+ + + + +PS+ S T P R S A
Sbjct: 175 SSP-PFALQPPTPSWRPSTPPSAKTLTPPRRSPSPA 209
>02_05_0979 + 33268294-33269595
Length = 433
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 283 TSSSRPPGMSSTQPPPSSSHISKLKLRSRAA 191
+SS RPP +ST PPP H + R AA
Sbjct: 207 SSSWRPPAAASTTPPPRHWHYPRENWRRGAA 237
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 23.8 bits (49), Expect(2) = 6.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 298 TLCAVTSSSRPPGMSSTQPPPSSSHISKLKLRSRAAKSD*ESPVSAST 155
T + +S PP S PS+S + + A+ S +P SA T
Sbjct: 81 TTLSCSSHPTPPPPPSPTTSPSASSLPPVPTPRSASSSKCSAPTSAQT 128
Score = 23.4 bits (48), Expect(2) = 6.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 472 AATFISPT-PFSSRRKSSAVKPSSADSGNTSRTPT 371
A++ PT P SS R ++ PSS + +S TPT
Sbjct: 13 ASSSYGPTSPPSSCRNAAPSPPSSNSTPTSSTTPT 47
>11_01_0788 + 6599962-6602700
Length = 912
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 273 ELEVTAHNVYDYVRKYSQHRMLISQEKALE 362
E+ AH+V D + KYS H +++ +E +++
Sbjct: 74 EVRGLAHHVQDVMDKYSYHALMLEEESSMK 103
>02_01_0190 +
1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -2
Query: 511 SPLSSLKLV*ETRA---ATFISPTPFSSRRKSSAVKPSSADSGNTSRTPTRIASRAFS 347
SP++ LK + RA + SP+P S R+S++ PS+ S SRT + A+ + S
Sbjct: 68 SPIAQLKTLASIRAPAPSPKPSPSPSPSPRRSTSASPSATLSSLVSRTFSNNAASSSS 125
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 594 VYFWTGSPALPASEEGFQPMPSVTIRPADDAHLPTANT 707
+ FW P LP+S G P PS + P LP +T
Sbjct: 582 IQFWQPPPQLPSSAAGGNPNPSSSAFPYLKKPLPMLDT 619
>05_02_0004 -
5528713-5528718,5529039-5529390,5529802-5530339,
5530354-5531731,5531895-5532015,5534226-5534545
Length = 904
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 570 THLERQDLVYFWTGSPALPASEEGFQPMPSVTIRPADDAH 689
T +ER D ++W G + A G +P P + RP H
Sbjct: 51 TSVERTDPPWWWRGEHSRGALGGGARPSPLTSSRPTPPGH 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,416,014
Number of Sequences: 37544
Number of extensions: 434316
Number of successful extensions: 1664
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1657
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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