Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_J06
(941 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 178 5e-45
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 178 5e-45
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 81 1e-15
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 78 1e-14
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ... 67 2e-11
Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 60 2e-09
AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP ubiquit... 57 2e-08
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 45 7e-05
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 45 7e-05
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 37 0.024
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.6
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 28 8.4
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 178 bits (433), Expect = 5e-45
Identities = 94/223 (42%), Positives = 136/223 (60%), Gaps = 1/223 (0%)
Frame = +3
Query: 48 LFLNRHVLKYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSL-EM 224
L +RH+ YIL PI + DL F+DP+++ +LR L ++ + LD +FS+ E
Sbjct: 2701 LRFSRHIFSYILKLPICWLDLGFYDPVLFNNLRALF--------KAHPSELDTDFSIVEQ 2752
Query: 225 CXXXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESA 404
V L P G E+ V NV +YV KY++ ++ + EA+R G+LDV+PES
Sbjct: 2753 SADGKAVTVNLKPNGDEVLVNKDNVIEYVYKYAERVLVGKRIITFEAIREGILDVIPESM 2812
Query: 405 LEGLTAEDLRLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLER 584
L GLT EDLRL++ G+ ++++ L T F DES E L RFK+W W +++ T E+
Sbjct: 2813 LFGLTPEDLRLIICGIESVSISVLQENTGFLDESRASQETLNRFKQWFWQVIESFTQQEK 2872
Query: 585 QDLVYFWTGSPALPASEEGFQPMPSVTIRPADDAHLPTANTCI 713
Q+LV+FWTGSPALPA+ + + SV +RP +D LPTANTCI
Sbjct: 2873 QELVFFWTGSPALPAAGK-WPTSASVMLRPQEDVFLPTANTCI 2914
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 178 bits (433), Expect = 5e-45
Identities = 94/223 (42%), Positives = 136/223 (60%), Gaps = 1/223 (0%)
Frame = +3
Query: 48 LFLNRHVLKYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSL-EM 224
L +RH+ YIL PI + DL F+DP+++ +LR L ++ + LD +FS+ E
Sbjct: 2701 LRFSRHIFSYILKLPICWLDLGFYDPVLFNNLRALF--------KAHPSELDTDFSIVEQ 2752
Query: 225 CXXXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESA 404
V L P G E+ V NV +YV KY++ ++ + EA+R G+LDV+PES
Sbjct: 2753 SADGKAVTVNLKPNGDEVLVNKDNVIEYVYKYAERVLVGKRIITFEAIREGILDVIPESM 2812
Query: 405 LEGLTAEDLRLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLER 584
L GLT EDLRL++ G+ ++++ L T F DES E L RFK+W W +++ T E+
Sbjct: 2813 LFGLTPEDLRLIICGIESVSISVLQENTGFLDESRASQETLNRFKQWFWQVIESFTQQEK 2872
Query: 585 QDLVYFWTGSPALPASEEGFQPMPSVTIRPADDAHLPTANTCI 713
Q+LV+FWTGSPALPA+ + + SV +RP +D LPTANTCI
Sbjct: 2873 QELVFFWTGSPALPAAGK-WPTSASVMLRPQEDVFLPTANTCI 2914
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 81.0 bits (191), Expect = 1e-15
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Frame = +3
Query: 51 FLNRHVLKYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCX 230
+ R K+IL P+R+ DL DP ++SL ++ D ALDL FS E+
Sbjct: 3930 YFTRAFYKHILNLPVRYQDLESEDPAFFKSL-DFLLQNPIDD-----LALDLTFSTEVEE 3983
Query: 231 XXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALE 410
+L P GR++EV N +YV+ Q +M S K L+A G +++P+ +
Sbjct: 3984 FGVRSVRDLKPNGRKIEVNDANKDEYVKLVCQMKMTGSIRKQLDAFLTGFYEIIPKDLIS 4043
Query: 411 GLTAEDLRLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQD 590
++L LL++G+ +++ + + T D G Q + + +W W + ++
Sbjct: 4044 MFNEQELELLISGLPTVDIDDMAANT---DYKGFQ--KTSTHIQWFWRALRSFEKEDKAK 4098
Query: 591 LVYFWTGSPALP----ASEEGFQPMP--SVTIRPADDAHLPTANTC 710
+ F TG+ +P AS EG + S+ + LP A+TC
Sbjct: 4099 FLQFVTGTSKVPLQGFASLEGMNGVQKFSIHMDSRGGDRLPAAHTC 4144
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical protein
D2085.4 protein.
Length = 1001
Score = 77.8 bits (183), Expect = 1e-14
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 2/201 (0%)
Frame = +3
Query: 117 FDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCXXXXXXCVELIPGGRELEVTAHN 296
FDPI+++ L+ L + +++ L L L+FS+ V L P G + VT N
Sbjct: 778 FDPIIFKHLKAL----QKMNNREL-DELQLDFSVVTSDMGLVRNVNLKPNGSKFRVTVEN 832
Query: 297 VYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALEGLTAEDLRLLLNGVGDINVA-A 473
V++YVR Y + + ++A+R G+ +++ + +L++++ G ++ A
Sbjct: 833 VHEYVRLYVNYHLKQRIASMVDAVRKGISEIISIEWMRMFAPHELQIMIAGYEEVFTAKE 892
Query: 474 LVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQDLVYFWTGSPALPASE-EGFQP 650
L + +G Q ++ W ++DK+++ +++ L+ F TG P + QP
Sbjct: 893 LRKFCELRFAAGTQD---INYEEMFWDVIDKLSNDDKKALLKFVTGCSRAPVDGFKSIQP 949
Query: 651 MPSVTIRPADDAHLPTANTCI 713
V + P+ D LPT+ TC+
Sbjct: 950 RMGVLVIPSSDDELPTSATCM 970
>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
protein Y39A1C.2 protein.
Length = 1066
Score = 66.9 bits (156), Expect = 2e-11
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 5/206 (2%)
Frame = +3
Query: 24 YSGIP*DLLFLNRHVLKYILG--RPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAA 197
Y GI D+ L +L +LG R F +L+ DP +Y SL V G+ A
Sbjct: 788 YEGIVVDVQ-LAPVLLAAVLGSHRLCAFDELSQLDPELYRSLT--FVKRYEGE----MAD 840
Query: 198 LDLNFSLEMCXXXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVG 377
L L FS++ V+L+P GR + VT N DYV + + HR+ ++ +A G
Sbjct: 841 LSLTFSVDEDFMGKISTVDLVPSGRTISVTNENKIDYVHRMAHHRVFRRTQEQCKAFVTG 900
Query: 378 VLDVLPESALEGLTAEDLRLLLNGV-GDINVAALV-SYTSFNDESGEQPERLARFKRWLW 551
+ +L + L DL+ L++GV DI++A L + F G R +WLW
Sbjct: 901 MQSILQPTWLSLFAPNDLQCLISGVNSDIDLADLKRNVQYFGGFHGNH-----RLIKWLW 955
Query: 552 AIVD-KMTHLERQDLVYFWTGSPALP 626
I++ K T ER+ + F T P
Sbjct: 956 DILENKFTSEERKLFLKFVTSCSRPP 981
>Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical protein
F45H7.6 protein.
Length = 889
Score = 66.1 bits (154), Expect = 3e-11
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 12/233 (5%)
Frame = +3
Query: 48 LFLNRHVLKYILGRPIRFHDLAFFDPIVYESLRQL----VVDAETGDSQSLFA---ALDL 206
+F K + RP+ D D Y+S+ L VVD E S DL
Sbjct: 629 VFFTNVFYKSLQKRPVTLMDFKESDAEFYKSMNWLLENDVVDLEMSFVYSSMVNGKVSDL 688
Query: 207 NFSLEMCXXXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLD 386
S + EL+PGG VT N +++ Q + + EK LE +
Sbjct: 689 TLSSIVSVALQLAEQELVPGGESQMVTEANKAEFIDLMCQKKAIRGVEKPLEILLTSFNQ 748
Query: 387 VLPESALEGLTAEDLRLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDK 566
+L ++ L L + DL+ +L+G ++++ + T + + G + W W +++
Sbjct: 749 ILNDNLLNSLESSDLKRILSGSLELDLNDWRTNTIY--KGGYSDCHIV--VEWFWEVIET 804
Query: 567 MTHLERQDLVYFWTGSPALP----ASEEGFQPMPSVTIRPADDA-HLPTANTC 710
MT+ ER DL+ F TGS ++P ++ G + + I DA P A+TC
Sbjct: 805 MTNQERFDLLLFVTGSSSVPFEGFSALRGNEEISKFCIEKWGDATSFPRAHTC 857
>Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical protein
F45H7.6 protein.
Length = 889
Score = 66.1 bits (154), Expect = 3e-11
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 12/233 (5%)
Frame = +3
Query: 48 LFLNRHVLKYILGRPIRFHDLAFFDPIVYESLRQL----VVDAETGDSQSLFA---ALDL 206
+F K + RP+ D D Y+S+ L VVD E S DL
Sbjct: 629 VFFTNVFYKSLQKRPVTLMDFKESDAEFYKSMNWLLENDVVDLEMSFVYSSMVNGKVSDL 688
Query: 207 NFSLEMCXXXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLD 386
S + EL+PGG VT N +++ Q + + EK LE +
Sbjct: 689 TLSSIVSVALQLAEQELVPGGESQMVTEANKAEFIDLMCQKKAIRGVEKPLEILLTSFNQ 748
Query: 387 VLPESALEGLTAEDLRLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDK 566
+L ++ L L + DL+ +L+G ++++ + T + + G + W W +++
Sbjct: 749 ILNDNLLNSLESSDLKRILSGSLELDLNDWRTNTIY--KGGYSDCHIV--VEWFWEVIET 804
Query: 567 MTHLERQDLVYFWTGSPALP----ASEEGFQPMPSVTIRPADDA-HLPTANTC 710
MT+ ER DL+ F TGS ++P ++ G + + I DA P A+TC
Sbjct: 805 MTNQERFDLLLFVTGSSSVPFEGFSALRGNEEISKFCIEKWGDATSFPRAHTC 857
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 60.1 bits (139), Expect = 2e-09
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 4/217 (1%)
Frame = +3
Query: 72 KYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCXXXXXXCV 251
KY+L P DL P + L+ L+ E D + +F LNF +
Sbjct: 782 KYLLDTPPDLEDLCELSPSEGKGLKMLL-SYEEDDVEDVFG---LNFCISFNILGETHTT 837
Query: 252 ELIPGGRELEVTAHNVYDYVRKYSQHRMLI--SQEKALEAM--RVGVLDVLPESALEGLT 419
EL+ GG E VT N +YVR Y HR+ + + E A +A+ R G + L L
Sbjct: 838 ELLSGGTEKPVTNANRDEYVRLYVHHRLELGYNGEIAQQALLFRKGFSESLHSRTLRFFQ 897
Query: 420 AEDLRLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQDLVY 599
+L+ ++ G + + + E + F + +A+ D ER+ +
Sbjct: 898 PCELKEMIVGNENYDWNEFRDILMYRGEYSSSHPTIQAFWKAFFALTDD----ERRKFLQ 953
Query: 600 FWTGSPALPASEEGFQPMPSVTIRPADDAHLPTANTC 710
F TGS +P S G++ + I+P+ LP A+TC
Sbjct: 954 FLTGSTRIPVS--GWEEL-HAAIQPSAPESLPVAHTC 987
>AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP
ubiquitin-protein ligase protein.
Length = 655
Score = 57.2 bits (132), Expect = 2e-08
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Frame = +3
Query: 24 YSGIP*DLLFLNRHVLKYILG--RPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAA 197
Y GI D+ L +L +LG R F +L+ DP +Y SL V G+ A
Sbjct: 376 YEGIVVDVQ-LAPVLLAAVLGSHRLCAFDELSQLDPELYRSLT--FVKRYEGE----MAD 428
Query: 198 LDLNFSLEMCXXXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVG 377
L L FS++ V+L+P GR + VT N DYV + + HR+ ++ +A G
Sbjct: 429 LSLTFSVDEDFMGKISTVDLVPSGRTISVTNENKIDYVHRMAHHRVFRRTQEQCKAFVTG 488
Query: 378 VLDVLPESALEGLTAEDLRLLLNGV 452
+ +L + L DL+ L++GV
Sbjct: 489 MQSILQPTWLSLFAPNDLQCLISGV 513
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain protein
(e3 ubiquitinligase) protein 1, isoform b protein.
Length = 792
Score = 45.2 bits (102), Expect = 7e-05
Identities = 46/198 (23%), Positives = 76/198 (38%)
Frame = +3
Query: 72 KYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCXXXXXXCV 251
K +L + I D+ D +Y SL + + L+ D E+
Sbjct: 554 KKMLNKKIVLKDIEQVDSEIYNSLMWIKDNNIDECDMELYFVADYELLGEL------KTY 607
Query: 252 ELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALEGLTAEDL 431
EL GG E+ VT N +Y+ + R E+ +A G V P ++ +L
Sbjct: 608 ELKEGGTEIAVTEENKLEYIELLVEWRFNRGVEQQTKAFFTGFNSVFPLEWMQYFDEREL 667
Query: 432 RLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQDLVYFWTG 611
LLL G+ D++V T + + + + W W V + +R L+ F TG
Sbjct: 668 ELLLCGMQDVDVDDWQRNTVYRHYAPQSKQ-----VTWFWQWVRSLDQEKRARLLQFVTG 722
Query: 612 SPALPASEEGFQPMPSVT 665
+ +P GF + T
Sbjct: 723 TCRVPVG--GFSELMGST 738
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain protein
(e3 ubiquitinligase) protein 1, isoform a protein.
Length = 794
Score = 45.2 bits (102), Expect = 7e-05
Identities = 46/198 (23%), Positives = 76/198 (38%)
Frame = +3
Query: 72 KYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALDLNFSLEMCXXXXXXCV 251
K +L + I D+ D +Y SL + + L+ D E+
Sbjct: 556 KKMLNKKIVLKDIEQVDSEIYNSLMWIKDNNIDECDMELYFVADYELLGEL------KTY 609
Query: 252 ELIPGGRELEVTAHNVYDYVRKYSQHRMLISQEKALEAMRVGVLDVLPESALEGLTAEDL 431
EL GG E+ VT N +Y+ + R E+ +A G V P ++ +L
Sbjct: 610 ELKEGGTEIAVTEENKLEYIELLVEWRFNRGVEQQTKAFFTGFNSVFPLEWMQYFDEREL 669
Query: 432 RLLLNGVGDINVAALVSYTSFNDESGEQPERLARFKRWLWAIVDKMTHLERQDLVYFWTG 611
LLL G+ D++V T + + + + W W V + +R L+ F TG
Sbjct: 670 ELLLCGMQDVDVDDWQRNTVYRHYAPQSKQ-----VTWFWQWVRSLDQEKRARLLQFVTG 724
Query: 612 SPALPASEEGFQPMPSVT 665
+ +P GF + T
Sbjct: 725 TCRVPVG--GFSELMGST 740
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 36.7 bits (81), Expect = 0.024
Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Frame = +3
Query: 24 YSGIP*DLLFLNRHVLKYILGRPIRFHDLAFFDPIVYESLRQLVVDAETGDSQSLFAALD 203
Y G D F+ R K +LG+ I D+ D Y SL V D + D L+
Sbjct: 494 YHGKLLDAFFI-RPFYKMMLGKKITLFDMESVDNEYYNSLIY-VKDNDPAD-------LE 544
Query: 204 LNFSLEMCXXXXXXCVELIPGGRELEVTAHNVYDYVRKYSQHRML-ISQEKALEAMRVGV 380
L FSL+ +ELIP G + VT N +Y+ +L + LE + G+
Sbjct: 545 LTFSLDDSIFGETQNIELIPNGANVPVTEDNKEEYIEAVVPSNLLRLFDANELELLMCGL 604
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -2
Query: 517 GCSPLSSLKLV*ETR-AATFISPTPFSSRRKSSAVKPSSADSGNTSRTPTRIASRAFS*E 341
GCS K V AA I P+ SS K+ + S D+ + R +IA E
Sbjct: 145 GCSSPCKYKSVRRAAFAAKTIDPSCNSSELKNIILDNISEDASESKRNIQKIAEETLGHE 204
Query: 340 INILC 326
+N++C
Sbjct: 205 VNVIC 209
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = -2
Query: 622 KAGDPVQKYTKSCLSKCVILSTIAHSQRLKRASRSGCSPLSSLKLV*ETRAATFISPTPF 443
+ G YT + IL+ ++S + R P+S V RA T + T
Sbjct: 120 RPGSAASNYTTASTINPTILAGASYSSKASSHIRQ---PVS----VRSPRAQTGTTQTTA 172
Query: 442 SSRRKSSAVKPSSADSGNTSRTPTRIA 362
+S S++++PS S T+R P +A
Sbjct: 173 ASGSASNSIRPSIGSSSVTTRVPNTLA 199
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = -2
Query: 622 KAGDPVQKYTKSCLSKCVILSTIAHSQRLKRASRSGCSPLSSLKLV*ETRAATFISPTPF 443
+ G YT + IL+ ++S + R P+S V RA T + T
Sbjct: 120 RPGSAASNYTTASTINPTILAGASYSSKASSHIRQ---PVS----VRSPRAQTGTTQTTA 172
Query: 442 SSRRKSSAVKPSSADSGNTSRTPTRIA 362
+S S++++PS S T+R P +A
Sbjct: 173 ASGSASNSIRPSIGSSSVTTRVPNTLA 199
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 493 KLV*ETRAATFISPTPFSSRRKSSAVKPSSADSGNTSRT 377
K+ ET+ T ++P P +S + S+ PS+ + T+ T
Sbjct: 741 KVTVETKQETAVTPAPTTSEKTSTTAAPSTKPAEETTTT 779
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,312,038
Number of Sequences: 27780
Number of extensions: 366526
Number of successful extensions: 1214
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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