Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_J04
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024860-1|AAK29986.1|  132|Caenorhabditis elegans Hypothetical ...    81   8e-16
Z81038-12|CAB02758.2|  380|Caenorhabditis elegans Hypothetical p...    31   1.5  
AL031632-3|CAA21006.1|  283|Caenorhabditis elegans Hypothetical ...    31   1.5  
AC006633-1|AAK68374.1|  113|Caenorhabditis elegans Hypothetical ...    29   4.7  

>AC024860-1|AAK29986.1|  132|Caenorhabditis elegans Hypothetical
           protein Y71H2AR.1 protein.
          Length = 132

 Score = 81.4 bits (192), Expect = 8e-16
 Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
 Frame = +3

Query: 360 FSGSK-LPDGNSWCPDCVEAEPVVRHYLSELDKS---IIFVYVDVGDREYWKDKECPFRT 527
           F+GSK L  G SWCPDCV AEPVV   + +   +   + FV V VG+RE W+D    FRT
Sbjct: 32  FTGSKILTTGESWCPDCVVAEPVVEEVIKDAAVAGLDVHFVTVFVGNREVWRDPAVGFRT 91

Query: 528 DSRSKLMVIPTLIK-WKGVQRLEGSQCSNRELLQMLFEEED 647
           D   KL  IPTL++     +RL   Q +N+ L++  F EED
Sbjct: 92  DPTLKLTCIPTLLEVGNKAKRLLERQIANKHLVKDFFTEED 132


>Z81038-12|CAB02758.2|  380|Caenorhabditis elegans Hypothetical
           protein C25A1.3 protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 396 CPDCVEAEPVVRHYLSELDKSIIFVY 473
           CP+ +   P+V+H L ELD  ++FV+
Sbjct: 228 CPEFLAYFPLVKHLLEELDMELLFVH 253


>AL031632-3|CAA21006.1|  283|Caenorhabditis elegans Hypothetical
           protein Y32B12B.3 protein.
          Length = 283

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -1

Query: 698 ILVLESALKRIGDFSYLIFFFEQHLQKFPIAALASLKPLYSL 573
           IL+L   + R+G   + IF+F+ H +KFPI+ +  L   Y L
Sbjct: 97  ILMLSINIDRLGALYFPIFYFKYH-RKFPISIIVILTLTYIL 137


>AC006633-1|AAK68374.1|  113|Caenorhabditis elegans Hypothetical
           protein F35B3.3 protein.
          Length = 113

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +3

Query: 489 REYWKDKECPFRTDSRSKLMVIPTLIKWKGVQRLEGSQCSNR 614
           R+ +K K  P  TD  S    I     W  +QR+  S C NR
Sbjct: 56  RDVFKKKSSPCETDVNSNAEHIGGESIWGKIQRMSVSNCQNR 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,749,311
Number of Sequences: 27780
Number of extensions: 380643
Number of successful extensions: 811
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)