Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_J02
(832 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 33 0.28
08_02_1204 - 25267546-25268219,25268319-25268452,25269567-252696... 32 0.49
03_05_0067 - 20460206-20460703,20461255-20461530 32 0.49
12_02_0299 - 17051570-17052474,17053542-17053755 28 0.88
01_03_0005 + 11568545-11569119,11569179-11569191 31 1.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 2.0
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.6
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 30 2.6
08_02_0226 - 14480461-14481199,14481399-14482243 29 3.4
05_03_0637 - 16465433-16466242 29 3.4
05_03_0627 - 16342211-16342264,16342332-16342412,16342751-163428... 29 3.4
06_03_1381 - 29754405-29754525,29754617-29754671,29755383-297554... 29 4.5
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 4.5
03_02_0734 - 10809724-10809796,10809907-10810094,10810183-108102... 29 4.5
01_05_0669 - 24152057-24152110,24152224-24152308,24152401-241524... 29 4.5
02_03_0367 + 18220099-18220905 29 6.0
09_04_0295 - 16454862-16455035,16455122-16455264,16455393-164559... 28 7.9
01_06_1724 - 39452858-39454309 28 7.9
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 33.1 bits (72), Expect = 0.28
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 464 PPPXXFFFXXPPPPPPXXXFF 402
PPP FF PPPPPP ++
Sbjct: 69 PPPAAFFAAVPPPPPPPFEYY 89
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 464 PPPXXFFFXXPPPPPPXXXFFFXXXXG 384
PPP FF PPPPP ++ G
Sbjct: 68 PPPPAAFFAAVPPPPPPPFEYYPAVGG 94
>08_02_1204 -
25267546-25268219,25268319-25268452,25269567-25269661,
25270289-25270304,25270635-25270684,25270960-25271331
Length = 446
Score = 32.3 bits (70), Expect = 0.49
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 385 PXXXXKKKXXXGGGGGGXXKKKXXGGGXPPPPP 483
P K G GGGG K K PPPPP
Sbjct: 67 PPSSSSKAAGGGRGGGGKNKGKGVAAAAPPPPP 99
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 32.3 bits (70), Expect = 0.49
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 470 GXPPPXXFFFXXPPPPPP 417
G PPP +F PPPPPP
Sbjct: 13 GPPPPPQYFQAGPPPPPP 30
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 27.9 bits (59), Expect(2) = 0.88
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 461 PPXXFFFXXPPPPPP 417
PP F+ PPPPPP
Sbjct: 311 PPLPSFYPSPPPPPP 325
Score = 25.8 bits (54), Expect(2) = 5.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 464 PPPXXFFFXXPPPPPP 417
PP F+ PPPPPP
Sbjct: 311 PPLPSFYPSPPPPPPP 326
Score = 22.2 bits (45), Expect(2) = 0.88
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 434 PPPPPPXXXF 405
PPPPPP F
Sbjct: 325 PPPPPPPPSF 334
Score = 21.4 bits (43), Expect(2) = 5.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 434 PPPPPPXXXFF 402
PPPPPP F
Sbjct: 324 PPPPPPPPPSF 334
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 418 GGGGGGXXKKKXXGGGXPPPPP 483
GGGGGG + GG P PPP
Sbjct: 121 GGGGGGWQQGGGGGGAYPTPPP 142
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 418 GGGGGGXXKKKXXGGGXPPPPP 483
GGGGGG ++ GGG P PP
Sbjct: 120 GGGGGGGWQQGGGGGGAYPTPP 141
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 2.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 464 PPPXXFFFXXPPPPPP 417
PPP ++ PPPPPP
Sbjct: 83 PPPPQMYYQPPPPPPP 98
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 482 GGGGGXPPPXXFFFXXPPPPPP 417
G GG PPP PPPPPP
Sbjct: 1168 GFRGGTPPPNAHGGVAPPPPPP 1189
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 482 GGGGGXPPPXXFFFXXPPPPPP 417
GGG G P + PPPPPP
Sbjct: 23 GGGAGYPRGHKQLYAPPPPPPP 44
>08_02_0226 - 14480461-14481199,14481399-14482243
Length = 527
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 418 GGGGGGXXKKKXXGGGXPPPPP 483
GGGGGG K PPPPP
Sbjct: 425 GGGGGGALPSKIHVNIEPPPPP 446
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 482 GGGGGXPPPXXFFFXXPPPPPP 417
GGGGG P PPPPP
Sbjct: 425 GGGGGGALPSKIHVNIEPPPPP 446
>05_03_0637 - 16465433-16466242
Length = 269
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 418 GGGGGGXXKKKXXGGGXP 471
GGGGGG KKK G G P
Sbjct: 26 GGGGGGRTKKKAAGKGGP 43
>05_03_0627 -
16342211-16342264,16342332-16342412,16342751-16342849,
16343660-16343770,16343964-16344116,16344741-16344881,
16345456-16345513,16345852-16345967,16346292-16346405,
16346496-16346557,16348788-16348930,16349030-16349097,
16349200-16349379,16349835-16350013,16350447-16350636,
16350920-16350978,16351421-16351574,16352133-16352158,
16352567-16353014
Length = 811
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 482 GGGGGXPPPXXFFFXXPPPPPP 417
GGGG PP PPPPPP
Sbjct: 55 GGGGRAPPRAAGKSPAPPPPPP 76
>06_03_1381 -
29754405-29754525,29754617-29754671,29755383-29755440,
29755819-29755988,29756576-29756780
Length = 202
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 418 GGGGGGXXKKKXXGGGXPPPPP 483
GGGGGG + + G PPPPP
Sbjct: 6 GGGGGGAGEAR--GADAPPPPP 25
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 418 GGGGGGXXKKKXXGGGXPPPP 480
G GGGG GGG PPP
Sbjct: 72 GSGGGGGAASNNGGGGSAPPP 92
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 406 KXXXGGGGGGXXKKKXXGGGXPPP 477
K GGGGG GG PPP
Sbjct: 69 KHSGSGGGGGAASNNGGGGSAPPP 92
>03_02_0734 -
10809724-10809796,10809907-10810094,10810183-10810289,
10810383-10810593
Length = 192
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 482 GGGGGXPPPXXFFFXXPPPPPP 417
GGGGG PP PPPP
Sbjct: 41 GGGGGAAPPDTIILLYVRPPPP 62
>01_05_0669 -
24152057-24152110,24152224-24152308,24152401-24152486,
24153129-24154341,24154441-24154529,24154607-24154639,
24154674-24154859,24155290-24155380,24155588-24155622,
24155736-24155817,24155968-24156020,24156404-24156469,
24156752-24156820,24156821-24156984,24157925-24158432,
24158543-24158602
Length = 957
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 479 GGGGXPPPXXFFFXXPPPPP 420
GGG PPP + + P PPP
Sbjct: 70 GGGRGPPPSLYGYAPPQPPP 89
>02_03_0367 + 18220099-18220905
Length = 268
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 464 PPPXXFFFXXPPPPPP 417
PPP F PPPPPP
Sbjct: 183 PPPSSLFPPLPPPPPP 198
>09_04_0295 -
16454862-16455035,16455122-16455264,16455393-16455939,
16456006-16456332
Length = 396
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 418 GGGGGGXXKKKXXGGGXPPPPP 483
GG GGG +++ PPPPP
Sbjct: 204 GGDGGGRSRERRRQPSSPPPPP 225
>01_06_1724 - 39452858-39454309
Length = 483
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 464 PPPXXFFFXXPPPPPP 417
PPP + PPPPPP
Sbjct: 347 PPPPCLAYQMPPPPPP 362
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,875,711
Number of Sequences: 37544
Number of extensions: 223277
Number of successful extensions: 4788
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4255
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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